Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0083
(744 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75713-9|CAB00053.1| 235|Caenorhabditis elegans Hypothetical pr... 161 4e-40
Z75713-8|CAB00056.1| 234|Caenorhabditis elegans Hypothetical pr... 161 4e-40
M73827-1|AAA27983.1| 234|Caenorhabditis elegans casein kinase I... 158 4e-39
Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical pr... 31 0.65
U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein. 31 0.65
L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage stimul... 31 0.65
Z81043-6|CAB02803.3| 491|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z70211-1|CAA94157.2| 299|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 28 6.1
U14635-10|AAM81107.1| 552|Caenorhabditis elegans Abnormal dye f... 28 6.1
U14635-9|AAK84493.1| 574|Caenorhabditis elegans Abnormal dye fi... 28 6.1
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 28 6.1
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 28 8.0
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical p... 28 8.0
Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical p... 28 8.0
Z46787-12|CAE17726.1| 234|Caenorhabditis elegans Hypothetical p... 28 8.0
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 28 8.0
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 28 8.0
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 28 8.0
AF025452-2|AAB70943.1| 585|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z75713-9|CAB00053.1| 235|Caenorhabditis elegans Hypothetical
protein T01G9.6b protein.
Length = 235
Score = 161 bits (392), Expect = 4e-40
Identities = 67/85 (78%), Positives = 76/85 (89%)
Frame = +2
Query: 254 MTNRGISQMLDKFQSGDFGYCPRVYCECQPMLPIGLSDVPAEAMVKLYCPRCMDVYTPKS 433
+TNRGISQM++K++ DFG CPRVYCE QPMLPIGLSDVP EAMVKLYCPRC DV+ P+S
Sbjct: 89 LTNRGISQMVEKWRDHDFGVCPRVYCENQPMLPIGLSDVPGEAMVKLYCPRCNDVFVPRS 148
Query: 434 SRHHHTDGAYFGTGFPHMVFMVHPD 508
SRH HTDG+YFGTGFPHM+F VHPD
Sbjct: 149 SRHQHTDGSYFGTGFPHMLFFVHPD 173
Score = 151 bits (366), Expect = 5e-37
Identities = 74/108 (68%), Positives = 83/108 (76%), Gaps = 8/108 (7%)
Frame = +3
Query: 6 MSSSEEVSWIAWFCTLRGNEFFCEVDEDYINDKFNLTGLNEQVPHYREALDMILDLEP-- 179
MSSSEEVSWI WFC LRGNEFFCEVDE+YI D+FNLTGLNEQVP YR+ALDMILDLEP
Sbjct: 1 MSSSEEVSWITWFCGLRGNEFFCEVDEEYIQDRFNLTGLNEQVPKYRQALDMILDLEPED 60
Query: 180 ---DNPNESDLVEQASEILYGLIHARYI*P---IGALVKCWISSSLGI 305
DN +DLVEQA+E+LYGLIHARYI I +V+ W G+
Sbjct: 61 DIEDNATNTDLVEQAAEMLYGLIHARYILTNRGISQMVEKWRDHDFGV 108
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +1
Query: 502 PR*RPKRPASQFVPRLYGFKIHPLAYQIQQ 591
P RP+RP +QFVP+LYGFKIHP+AY Q+
Sbjct: 172 PDLRPRRPVTQFVPKLYGFKIHPVAYGGQE 201
>Z75713-8|CAB00056.1| 234|Caenorhabditis elegans Hypothetical
protein T01G9.6a protein.
Length = 234
Score = 161 bits (392), Expect = 4e-40
Identities = 67/85 (78%), Positives = 76/85 (89%)
Frame = +2
Query: 254 MTNRGISQMLDKFQSGDFGYCPRVYCECQPMLPIGLSDVPAEAMVKLYCPRCMDVYTPKS 433
+TNRGISQM++K++ DFG CPRVYCE QPMLPIGLSDVP EAMVKLYCPRC DV+ P+S
Sbjct: 88 LTNRGISQMVEKWRDHDFGVCPRVYCENQPMLPIGLSDVPGEAMVKLYCPRCNDVFVPRS 147
Query: 434 SRHHHTDGAYFGTGFPHMVFMVHPD 508
SRH HTDG+YFGTGFPHM+F VHPD
Sbjct: 148 SRHQHTDGSYFGTGFPHMLFFVHPD 172
Score = 152 bits (368), Expect = 3e-37
Identities = 74/107 (69%), Positives = 83/107 (77%), Gaps = 7/107 (6%)
Frame = +3
Query: 6 MSSSEEVSWIAWFCTLRGNEFFCEVDEDYINDKFNLTGLNEQVPHYREALDMILDLEP-- 179
MSSSEEVSWI WFC LRGNEFFCEVDE+YI D+FNLTGLNEQVP YR+ALDMILDLEP
Sbjct: 1 MSSSEEVSWITWFCGLRGNEFFCEVDEEYIQDRFNLTGLNEQVPKYRQALDMILDLEPDD 60
Query: 180 --DNPNESDLVEQASEILYGLIHARYI*P---IGALVKCWISSSLGI 305
DN +DLVEQA+E+LYGLIHARYI I +V+ W G+
Sbjct: 61 IEDNATNTDLVEQAAEMLYGLIHARYILTNRGISQMVEKWRDHDFGV 107
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +1
Query: 502 PR*RPKRPASQFVPRLYGFKIHPLAYQIQQ 591
P RP+RP +QFVP+LYGFKIHP+AY Q+
Sbjct: 171 PDLRPRRPVTQFVPKLYGFKIHPVAYGGQE 200
>M73827-1|AAA27983.1| 234|Caenorhabditis elegans casein kinase II
beta subunit protein.
Length = 234
Score = 158 bits (383), Expect = 4e-39
Identities = 66/85 (77%), Positives = 75/85 (88%)
Frame = +2
Query: 254 MTNRGISQMLDKFQSGDFGYCPRVYCECQPMLPIGLSDVPAEAMVKLYCPRCMDVYTPKS 433
+TNRGISQM++K++ DFG CPRVYCE QPMLPIGLSDVP EAMVKLYCPRC V+ P+S
Sbjct: 88 LTNRGISQMVEKWRDHDFGVCPRVYCENQPMLPIGLSDVPGEAMVKLYCPRCNMVFVPRS 147
Query: 434 SRHHHTDGAYFGTGFPHMVFMVHPD 508
SRH HTDG+YFGTGFPHM+F VHPD
Sbjct: 148 SRHQHTDGSYFGTGFPHMLFFVHPD 172
Score = 152 bits (368), Expect = 3e-37
Identities = 74/107 (69%), Positives = 83/107 (77%), Gaps = 7/107 (6%)
Frame = +3
Query: 6 MSSSEEVSWIAWFCTLRGNEFFCEVDEDYINDKFNLTGLNEQVPHYREALDMILDLEP-- 179
MSSSEEVSWI WFC LRGNEFFCEVDE+YI D+FNLTGLNEQVP YR+ALDMILDLEP
Sbjct: 1 MSSSEEVSWITWFCGLRGNEFFCEVDEEYIQDRFNLTGLNEQVPKYRQALDMILDLEPDD 60
Query: 180 --DNPNESDLVEQASEILYGLIHARYI*P---IGALVKCWISSSLGI 305
DN +DLVEQA+E+LYGLIHARYI I +V+ W G+
Sbjct: 61 IEDNATNTDLVEQAAEMLYGLIHARYILTNRGISQMVEKWRDHDFGV 107
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +1
Query: 502 PR*RPKRPASQFVPRLYGFKIHPLAYQIQQ 591
P RP+RP +QFVP+LYGFKIHP+AY Q+
Sbjct: 171 PDLRPRRPVTQFVPKLYGFKIHPVAYGGQE 200
>Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical
protein F28C6.6 protein.
Length = 735
Score = 31.5 bits (68), Expect = 0.65
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = -1
Query: 354 IGSIGWHSQYTRGQYPKSPDWNLSNI*LMPLLVICTGHVSIHIVSPMLVPPDQ--IHLDC 181
+G G H+ R +P+ PD +S + V CT S H V + PP Q HL
Sbjct: 569 MGGAGGHADVARYGFPR-PD--ISQMIPFKPRVNCTA--SFHPVPGGVFPPPQSVAHLMS 623
Query: 180 LAPDPESCPAPLYNVEL 130
L P P P NVEL
Sbjct: 624 LLPPPTCFIGPFINVEL 640
>U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein.
Length = 730
Score = 31.5 bits (68), Expect = 0.65
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = -1
Query: 354 IGSIGWHSQYTRGQYPKSPDWNLSNI*LMPLLVICTGHVSIHIVSPMLVPPDQ--IHLDC 181
+G G H+ R +P+ PD +S + V CT S H V + PP Q HL
Sbjct: 564 MGGAGGHADVARYGFPR-PD--ISQMIPFKPRVNCTA--SFHPVPGGVFPPPQSVAHLMS 618
Query: 180 LAPDPESCPAPLYNVEL 130
L P P P NVEL
Sbjct: 619 LLPPPTCFIGPFINVEL 635
>L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage
stimulation factor protein.
Length = 735
Score = 31.5 bits (68), Expect = 0.65
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = -1
Query: 354 IGSIGWHSQYTRGQYPKSPDWNLSNI*LMPLLVICTGHVSIHIVSPMLVPPDQ--IHLDC 181
+G G H+ R +P+ PD +S + V CT S H V + PP Q HL
Sbjct: 569 MGGAGGHADVARYGFPR-PD--ISQMIPFKPRVNCTA--SFHPVPGGVFPPPQSVAHLMS 623
Query: 180 LAPDPESCPAPLYNVEL 130
L P P P NVEL
Sbjct: 624 LLPPPTCFIGPFINVEL 640
>Z81043-6|CAB02803.3| 491|Caenorhabditis elegans Hypothetical
protein C29F3.7a protein.
Length = 491
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 374 AEAMVKLYCPRCMDVYTPKSSRHHHTDGAYFGTGFPHMVFMVHPDNDQNDLPLNSYQDY 550
+++ V P+C + H+ +G YF GF + PDN D +N Q+Y
Sbjct: 14 SQSEVSCEVPQCEKGFIIFDKPHNLLNGTYFPDGFKSSSPQLFPDNYSCDFKINVPQNY 72
>Z70211-1|CAA94157.2| 299|Caenorhabditis elegans Hypothetical
protein K11E4.1 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 15 SEEVSWIAWFCTLRGNEFFCEVDEDYINDKFNLTGLNEQVPHY 143
+E++ + + GNE F + + DKFN+ N+Q+P +
Sbjct: 176 AEQMFYFGYGSPRCGNEDFAYYVDSSLADKFNIVWFNDQIPEF 218
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 219 PMLVPPDQIHLDCLAPDPESCPAPL 145
P PP Q+ AP PES PAP+
Sbjct: 56 PAAAPPQQLEQPTPAPAPESAPAPV 80
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 703 RSDPKCSAMCVESARLRPNVYRCCTTGCA 617
+S+ +CSA+C P +CC++GC+
Sbjct: 113 QSNYECSALCQMDGEC-PETQKCCSSGCS 140
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 703 RSDPKCSAMCVESARLRPNVYRCCTTGCA 617
+S+ +CSA+C P +CC++GC+
Sbjct: 113 QSNYECSALCQMDGEC-PETQKCCSSGCS 140
>U14635-10|AAM81107.1| 552|Caenorhabditis elegans Abnormal dye
filling protein 13,isoform b protein.
Length = 552
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 87 DYINDKFNLTGLNEQVPHYREALDMILDLEPDNPN 191
D + D+ +L G+N HY++A+++ + +PN
Sbjct: 127 DTLEDRLSLAGVNYSRMHYQDAIEVYTSVLQTSPN 161
>U14635-9|AAK84493.1| 574|Caenorhabditis elegans Abnormal dye
filling protein 13,isoform a protein.
Length = 574
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 87 DYINDKFNLTGLNEQVPHYREALDMILDLEPDNPN 191
D + D+ +L G+N HY++A+++ + +PN
Sbjct: 149 DTLEDRLSLAGVNYSRMHYQDAIEVYTSVLQTSPN 183
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 703 RSDPKCSAMCVESARLRPNVYRCCTTGCA 617
+S+ +CSA+C P +CC++GC+
Sbjct: 113 QSNYECSALCQMDGEC-PETQKCCSSGCS 140
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 123 NEQVPHYREALDMILDLEPDNPNESDLVEQASEILY 230
+ VP Y L+++ D D++EQ +E+LY
Sbjct: 301 SSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLY 336
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
protein F02E9.4a protein.
Length = 1505
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 123 NEQVPHYREALDMILDLEPDNPNESDLVEQASEILY 230
+ VP Y L+++ D D++EQ +E+LY
Sbjct: 301 SSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLY 336
>Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical
protein ZK1320.12b protein.
Length = 497
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +1
Query: 541 PRLYGFKIHPLAYQIQQAAANSKPPQRSLSYNNGKR*ASAAPTQHTSRNILDPIVNVA 714
P + G HP Y +QQ Q+ +S N ++ A + + N L IVN A
Sbjct: 12 PTIAGRSFHPSGYSVQQFVPQQSNFQQPIS-NFTQKSAESRAQKQVGANFLPSIVNEA 68
>Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical
protein ZK1320.12a protein.
Length = 495
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +1
Query: 541 PRLYGFKIHPLAYQIQQAAANSKPPQRSLSYNNGKR*ASAAPTQHTSRNILDPIVNVA 714
P + G HP Y +QQ Q+ +S N ++ A + + N L IVN A
Sbjct: 12 PTIAGRSFHPSGYSVQQFVPQQSNFQQPIS-NFTQKSAESRAQKQVGANFLPSIVNEA 68
>Z46787-12|CAE17726.1| 234|Caenorhabditis elegans Hypothetical
protein C16C10.13 protein.
Length = 234
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = -3
Query: 721 FRLQHLRSDPKCSAM---CVESARLRPNVYRCCTTGCAAA 611
FRL H+ S P+CS + CV A++R + T +A
Sbjct: 166 FRLHHVSSIPRCSKVSTTCVSDAKMRTAIDASATQDIVSA 205
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Frame = -2
Query: 413 PCSAGSTASPS---LRRGRPTNQLAA*VGIHS---IHVGNIQNPQTGTY 285
PC A +P LR G P + + + HS +H+ +++ P TG Y
Sbjct: 445 PCQASGKPTPGISWLRDGLPIDITDSRISQHSTGSLHIADLKKPDTGVY 493
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Frame = -2
Query: 413 PCSAGSTASPS---LRRGRPTNQLAA*VGIHS---IHVGNIQNPQTGTY 285
PC A +P LR G P + + + HS +H+ +++ P TG Y
Sbjct: 445 PCQASGKPTPGISWLRDGLPIDITDSRISQHSTGSLHIADLKKPDTGVY 493
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Frame = -2
Query: 413 PCSAGSTASPS---LRRGRPTNQLAA*VGIHS---IHVGNIQNPQTGTY 285
PC A +P LR G P + + + HS +H+ +++ P TG Y
Sbjct: 445 PCQASGKPTPGISWLRDGLPIDITDSRISQHSTGSLHIADLKKPDTGVY 493
>AF025452-2|AAB70943.1| 585|Caenorhabditis elegans Hypothetical
protein B0454.6 protein.
Length = 585
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -1
Query: 345 IGWHSQYTRGQYPKSPDWNLSNI*LMPLLVICTGHVSIHIVSPMLVPPDQIH 190
IG+ T G+ KSP + + + VI T ++ + ++VP DQ+H
Sbjct: 247 IGFEVLATAGEEVKSPHRTIPVATFLSIGVIMTLYILVSSTLTLMVPYDQVH 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,448,767
Number of Sequences: 27780
Number of extensions: 415064
Number of successful extensions: 1171
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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