Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0082
         (784 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5DHF5 Cluster: SJCHGC09485 protein; n=1; Schistosoma j...    35   2.6  
UniRef50_Q54P02 Cluster: Putative uncharacterized protein; n=1; ...    34   4.6  
UniRef50_A5K666 Cluster: Putative uncharacterized protein; n=2; ...    33   8.1  

>UniRef50_Q5DHF5 Cluster: SJCHGC09485 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09485 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 118

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 408 YICIFLAHKYRLYICLYCVIVFYIYYCTIVSL 313
           Y+C+FL+H Y L   L+C + F +    ++SL
Sbjct: 21  YVCVFLSHSYNLVAFLFCFVHFNMMTILLISL 52


>UniRef50_Q54P02 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 90

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -2

Query: 417 NNNYICIFLAHKYRLYICLYCVIVFYIYYCTIVSLV 310
           NNNYI     ++Y L+    C+++ YIY+ T+V ++
Sbjct: 20  NNNYIYY---NEYTLFYFFLCIVIIYIYFLTVVVVI 52


>UniRef50_A5K666 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 409

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = -2

Query: 375 LYICLYCVIVFYIYYCTIVSLVQPLSTYDRTT*NYRTINILIVVVRTGH*SEPNTSFSAA 196
           +Y CL   I+FYI  CTI    +   T+ RT+  Y  +  L ++V   +  E N  +++ 
Sbjct: 247 IYDCLMLTIIFYIMGCTIDKERRREDTF-RTSLTYGVLKFLYLLVEMQNQQELNL-YASL 304

Query: 195 HLVAASHTLTLRI 157
           H V A   +  R+
Sbjct: 305 HSVVALPFVAYRV 317


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,331,419
Number of Sequences: 1657284
Number of extensions: 8771945
Number of successful extensions: 17085
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17034
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)