Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0082
         (784 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.39 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.8  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.8  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   4.8  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   4.8  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   4.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 432 FVVFPNNNYICIFLAHKYRLYICLYCVIVFYIYYCTIVSLVQPL 301
           F++F  +  +C +  + Y  +I L CV  +Y YY  I+  V  L
Sbjct: 89  FIIFTVHFLLCTY--YFYYAFIILLCV--YYFYYAFIIFTVHLL 128



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -2

Query: 399 IFLAHKYRLYICLYCVIVFYIYYCTIV 319
           +FL   Y   + L+ ++  Y +YC  +
Sbjct: 128 LFLLCIYYFVVPLFFLLCIYYFYCAFI 154


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 354  VIVFYIYYCTIVSLVQPLSTY 292
            V+  Y+YY TI +++   S++
Sbjct: 1212 VVARYVYYATIFTIITATSSF 1232


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 399 IFLAHKYRLYICLYCVIV 346
           IF  HK+R+YI +  +I+
Sbjct: 653 IFALHKFRIYIQVTKIII 670


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 439 YLHIITMFNL 468
           YLHIITM N+
Sbjct: 162 YLHIITMINM 171


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 439 YLHIITMFNL 468
           YLHIITM N+
Sbjct: 162 YLHIITMINM 171


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 439 YLHIITMFNL 468
           YLHIITM N+
Sbjct: 162 YLHIITMINM 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,507
Number of Sequences: 336
Number of extensions: 2509
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)