Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0080
(754 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 165 1e-39
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 160 3e-38
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 154 2e-36
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 151 2e-35
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 149 5e-35
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 147 2e-34
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 146 5e-34
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 136 7e-31
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 133 5e-30
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 133 5e-30
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 129 8e-29
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 128 1e-28
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 128 1e-28
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 124 2e-27
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 124 2e-27
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 124 2e-27
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 120 3e-26
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 118 1e-25
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 118 2e-25
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 116 8e-25
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 116 8e-25
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 115 1e-24
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 113 4e-24
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 112 8e-24
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 112 1e-23
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 112 1e-23
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 111 1e-23
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 111 2e-23
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 110 3e-23
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 110 4e-23
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 109 7e-23
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 109 9e-23
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 109 9e-23
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 108 1e-22
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 108 2e-22
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 108 2e-22
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 107 4e-22
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 107 4e-22
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 106 5e-22
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 106 5e-22
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 106 7e-22
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 105 9e-22
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 105 1e-21
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 105 2e-21
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 105 2e-21
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 104 2e-21
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 104 3e-21
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 103 4e-21
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 103 4e-21
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 103 5e-21
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 103 5e-21
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 103 6e-21
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 102 8e-21
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 102 8e-21
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 102 1e-20
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 102 1e-20
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 101 1e-20
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 101 2e-20
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 101 3e-20
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 101 3e-20
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 100 3e-20
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 100 3e-20
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 99 6e-20
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 99 1e-19
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 98 2e-19
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 98 2e-19
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 97 3e-19
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 97 3e-19
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 97 3e-19
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 97 4e-19
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 97 5e-19
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 97 5e-19
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 97 5e-19
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 97 5e-19
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 96 9e-19
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 95 1e-18
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 95 2e-18
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 95 2e-18
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 94 3e-18
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 94 3e-18
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 94 3e-18
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 94 4e-18
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 94 4e-18
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 94 4e-18
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 93 5e-18
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 93 7e-18
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 93 7e-18
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 93 9e-18
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 93 9e-18
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 92 1e-17
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 92 1e-17
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 91 2e-17
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 91 2e-17
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 91 2e-17
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 91 2e-17
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 91 3e-17
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 91 3e-17
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 91 4e-17
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 91 4e-17
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 91 4e-17
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 89 8e-17
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 89 1e-16
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 89 1e-16
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 89 1e-16
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 89 1e-16
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 88 3e-16
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 88 3e-16
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 88 3e-16
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 88 3e-16
UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1; ... 88 3e-16
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 87 3e-16
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 87 3e-16
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 87 3e-16
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 87 3e-16
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 87 4e-16
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 87 6e-16
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 86 8e-16
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 86 8e-16
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 86 1e-15
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 86 1e-15
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 85 1e-15
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 85 2e-15
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 85 2e-15
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 85 2e-15
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 85 2e-15
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 85 2e-15
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 85 2e-15
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 85 2e-15
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 85 2e-15
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 84 3e-15
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 84 3e-15
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 84 3e-15
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 84 4e-15
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 84 4e-15
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 84 4e-15
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 83 5e-15
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 83 5e-15
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 83 5e-15
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 83 5e-15
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 83 7e-15
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 83 7e-15
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 83 7e-15
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 83 9e-15
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 82 1e-14
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 82 1e-14
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 82 1e-14
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 82 1e-14
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 82 2e-14
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 82 2e-14
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 82 2e-14
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 82 2e-14
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 82 2e-14
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 81 2e-14
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 81 2e-14
UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lambl... 81 2e-14
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 81 2e-14
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 81 2e-14
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 81 2e-14
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 81 2e-14
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 81 3e-14
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 81 3e-14
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 81 3e-14
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 81 4e-14
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 81 4e-14
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 81 4e-14
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 81 4e-14
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 81 4e-14
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 81 4e-14
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 80 5e-14
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 80 5e-14
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 80 5e-14
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 80 5e-14
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 80 5e-14
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 80 5e-14
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 80 5e-14
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 80 5e-14
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 80 5e-14
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 80 7e-14
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 80 7e-14
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 80 7e-14
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 80 7e-14
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 79 9e-14
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 79 9e-14
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 79 9e-14
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 79 9e-14
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 79 9e-14
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 79 9e-14
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 79 1e-13
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 79 1e-13
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 79 1e-13
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 79 1e-13
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 79 1e-13
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 79 1e-13
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 79 1e-13
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 79 1e-13
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 79 2e-13
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 79 2e-13
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 79 2e-13
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 79 2e-13
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 79 2e-13
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 79 2e-13
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 79 2e-13
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 79 2e-13
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 79 2e-13
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 79 2e-13
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 79 2e-13
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 78 2e-13
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 78 2e-13
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 78 2e-13
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 78 2e-13
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 78 2e-13
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 78 2e-13
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 78 2e-13
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 78 2e-13
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 78 2e-13
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 78 2e-13
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 78 3e-13
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 78 3e-13
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 78 3e-13
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 78 3e-13
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 78 3e-13
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 78 3e-13
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 78 3e-13
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 78 3e-13
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 77 4e-13
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 77 4e-13
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 77 4e-13
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 77 4e-13
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 77 4e-13
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 77 4e-13
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 77 4e-13
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 77 5e-13
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 77 5e-13
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 77 5e-13
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 77 5e-13
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 77 5e-13
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 77 5e-13
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 77 5e-13
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 77 5e-13
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 77 5e-13
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 77 6e-13
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 77 6e-13
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 77 6e-13
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 77 6e-13
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 77 6e-13
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 77 6e-13
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 77 6e-13
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 76 8e-13
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 76 8e-13
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 76 8e-13
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 76 8e-13
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 76 8e-13
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 76 8e-13
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 76 1e-12
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 76 1e-12
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 76 1e-12
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 76 1e-12
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 75 1e-12
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 75 1e-12
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 75 1e-12
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 75 1e-12
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 75 1e-12
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 75 1e-12
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 75 1e-12
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 75 2e-12
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 75 2e-12
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 75 2e-12
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 75 3e-12
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 75 3e-12
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 75 3e-12
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 75 3e-12
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 75 3e-12
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 74 3e-12
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 74 3e-12
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 74 3e-12
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 74 3e-12
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 74 3e-12
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 74 3e-12
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 74 3e-12
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 74 3e-12
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 74 3e-12
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 74 4e-12
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 74 4e-12
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 74 4e-12
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 74 4e-12
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 74 4e-12
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 74 4e-12
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 74 4e-12
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 74 4e-12
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 74 4e-12
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 74 4e-12
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 74 4e-12
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 74 4e-12
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 73 6e-12
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 73 6e-12
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 73 6e-12
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 6e-12
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 73 6e-12
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 73 6e-12
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 73 6e-12
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 73 6e-12
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 73 8e-12
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 73 8e-12
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 73 8e-12
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 73 8e-12
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 73 8e-12
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 73 1e-11
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 73 1e-11
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 73 1e-11
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 73 1e-11
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 73 1e-11
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 73 1e-11
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 72 1e-11
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 72 1e-11
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 72 1e-11
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 72 1e-11
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 72 1e-11
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 72 1e-11
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 72 1e-11
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 72 1e-11
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 72 2e-11
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 72 2e-11
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 72 2e-11
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 72 2e-11
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 72 2e-11
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 72 2e-11
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 71 2e-11
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 71 2e-11
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 71 2e-11
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 71 2e-11
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 71 3e-11
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 71 3e-11
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 71 3e-11
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 71 3e-11
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 71 3e-11
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 71 3e-11
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 71 3e-11
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 71 4e-11
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 71 4e-11
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 71 4e-11
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 71 4e-11
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 71 4e-11
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 71 4e-11
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 71 4e-11
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 71 4e-11
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 71 4e-11
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 70 5e-11
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 5e-11
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 70 5e-11
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 70 5e-11
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 70 5e-11
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 70 7e-11
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 70 7e-11
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 70 7e-11
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 70 7e-11
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 70 7e-11
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 70 7e-11
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 70 7e-11
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 70 7e-11
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 70 7e-11
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 70 7e-11
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 69 9e-11
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 69 9e-11
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 69 9e-11
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 69 9e-11
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 69 9e-11
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 69 1e-10
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA... 69 1e-10
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 69 1e-10
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 69 2e-10
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 69 2e-10
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 69 2e-10
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 69 2e-10
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 68 2e-10
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 68 2e-10
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 68 2e-10
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 68 2e-10
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 68 2e-10
UniRef50_Q7PMT7 Cluster: ENSANGP00000010668; n=1; Anopheles gamb... 68 2e-10
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 68 2e-10
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 68 2e-10
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 68 3e-10
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 68 3e-10
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 68 3e-10
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 68 3e-10
UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2; ... 68 3e-10
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 68 3e-10
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 68 3e-10
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 67 4e-10
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 67 4e-10
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 67 4e-10
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 67 4e-10
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 67 4e-10
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 67 4e-10
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 67 4e-10
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 67 4e-10
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 67 4e-10
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 67 4e-10
UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56; ... 67 4e-10
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 67 5e-10
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 67 5e-10
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 67 5e-10
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 67 5e-10
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 67 5e-10
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 67 5e-10
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 67 5e-10
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 67 5e-10
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 67 5e-10
UniRef50_Q4P0Y5 Cluster: ATP-dependent RNA helicase DBP7; n=1; U... 67 5e-10
UniRef50_Q7S873 Cluster: ATP-dependent RNA helicase dbp-7; n=2; ... 67 5e-10
UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family pr... 66 7e-10
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 66 7e-10
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 66 7e-10
UniRef50_A2ZD51 Cluster: Putative uncharacterized protein; n=7; ... 66 7e-10
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 66 7e-10
UniRef50_Q0UHM7 Cluster: ATP-dependent RNA helicase DBP7; n=1; P... 66 7e-10
UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome s... 66 9e-10
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 66 9e-10
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 66 9e-10
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 66 9e-10
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 66 9e-10
UniRef50_A4RXX8 Cluster: Predicted protein; n=1; Ostreococcus lu... 66 9e-10
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 66 9e-10
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 66 9e-10
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 66 1e-09
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 66 1e-09
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 1e-09
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 1e-09
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 66 1e-09
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 65 2e-09
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 65 2e-09
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 65 2e-09
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 65 2e-09
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 65 2e-09
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 65 2e-09
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 65 2e-09
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 65 2e-09
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 65 2e-09
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 65 2e-09
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 65 2e-09
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 65 2e-09
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 65 2e-09
UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 65 2e-09
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 65 2e-09
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 65 2e-09
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 65 2e-09
UniRef50_Q6BKH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 65 2e-09
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 65 2e-09
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 64 3e-09
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 64 3e-09
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 64 3e-09
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 64 3e-09
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 64 3e-09
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 64 3e-09
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 64 3e-09
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 64 3e-09
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 64 3e-09
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 64 3e-09
UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 64 3e-09
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 64 3e-09
UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1; S... 64 3e-09
UniRef50_Q4HZ68 Cluster: ATP-dependent RNA helicase DBP7; n=1; G... 64 3e-09
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 64 4e-09
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 64 4e-09
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 64 5e-09
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 64 5e-09
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 64 5e-09
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 63 6e-09
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 63 6e-09
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 63 6e-09
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 63 6e-09
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 63 6e-09
UniRef50_A5AUZ1 Cluster: Putative uncharacterized protein; n=1; ... 63 6e-09
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 63 6e-09
UniRef50_A4QX49 Cluster: ATP-dependent RNA helicase DBP7; n=1; M... 63 6e-09
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 63 8e-09
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 63 8e-09
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 63 8e-09
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 63 8e-09
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 63 8e-09
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 63 8e-09
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 63 8e-09
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 63 8e-09
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 63 8e-09
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 63 8e-09
UniRef50_Q5KAI2 Cluster: ATP-dependent RNA helicase DBP7; n=1; F... 63 8e-09
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 63 8e-09
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 62 1e-08
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 62 1e-08
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 62 1e-08
UniRef50_Q0CF43 Cluster: ATP-dependent RNA helicase dbp7; n=10; ... 62 1e-08
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 62 1e-08
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 62 1e-08
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 165 bits (401), Expect = 1e-39
Identities = 77/100 (77%), Positives = 88/100 (88%)
Frame = +1
Query: 247 FWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 426
F + ++VRNTC+FGGAPK +QARDLERGVEIVIATPGRLIDFLE+GTT+L+RCTYLVLDE
Sbjct: 253 FGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDE 312
Query: 427 ADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
ADRMLDMGFEPQIRKI++QIRPDRQ L PK+ R L
Sbjct: 313 ADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQL 352
Score = 110 bits (264), Expect = 4e-23
Identities = 53/80 (66%), Positives = 65/80 (81%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
WSATWPKEV++LAE++L +YIQ+NIGSL LSANHNILQIVD+C E+EK KL LL +I
Sbjct: 341 WSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDI- 399
Query: 690 QSQEPGAKTIIFVETKRKAE 749
S E KTIIFVETK++ +
Sbjct: 400 -SAENETKTIIFVETKKRVD 418
Score = 101 bits (243), Expect = 1e-20
Identities = 48/65 (73%), Positives = 55/65 (84%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
+QTGSGKTLAY+LPA+VHINNQP + RGDGPIALVLAPTRELAQQIQQVA +FG + V
Sbjct: 201 AQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSN-THV 259
Query: 272 TRVCL 286
C+
Sbjct: 260 RNTCI 264
Score = 50.4 bits (115), Expect = 5e-05
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ G+ +PT IQAQGWPIAMSG++LVGVA+
Sbjct: 172 IRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQ 202
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 160 bits (389), Expect = 3e-38
Identities = 76/100 (76%), Positives = 84/100 (84%)
Frame = +1
Query: 247 FWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 426
F ++SYVRNTCVFGGAPK Q RDL+RG EIVIATPGRLIDFL G+TNL+RCTYLVLDE
Sbjct: 377 FGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDE 436
Query: 427 ADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
ADRMLDMGFEPQIRKI+ QIRPDRQTL PK+ + L
Sbjct: 437 ADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQL 476
Score = 123 bits (296), Expect = 5e-27
Identities = 58/87 (66%), Positives = 68/87 (78%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT WSATWPKEVK+LAED+LG+YIQINIGSL+LSANHNI Q+VD+C E KE KL
Sbjct: 460 RQT-LMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKT 518
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAEN 752
LL +I + E K IIFVETKR+ +N
Sbjct: 519 LLSDIYDTSESPGKIIIFVETKRRVDN 545
Score = 101 bits (241), Expect = 3e-20
Identities = 48/65 (73%), Positives = 55/65 (84%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
++TGSGKTL YILPAIVHINNQ P++RGDGPIALVLAPTRELAQQIQQVA +FG +V
Sbjct: 325 AKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSS-SYV 383
Query: 272 TRVCL 286
C+
Sbjct: 384 RNTCV 388
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ GYK PT IQAQGWPIAMSG N VG+AK
Sbjct: 296 IRRQGYKAPTAIQAQGWPIAMSGSNFVGIAK 326
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 154 bits (374), Expect = 2e-36
Identities = 74/92 (80%), Positives = 78/92 (84%)
Frame = +1
Query: 271 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 450
NTCVFGGAPK Q RDLERG EIVIATPGRLIDFLE+G TNL+RCTYLVLDEADRMLDMG
Sbjct: 226 NTCVFGGAPKGPQIRDLERGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMG 285
Query: 451 FEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
FEPQIRKI+ QIRPDRQ L PK+ RNL
Sbjct: 286 FEPQIRKIMGQIRPDRQVLMWSATWPKEVRNL 317
Score = 118 bits (284), Expect = 2e-25
Identities = 56/81 (69%), Positives = 67/81 (82%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
WSATWPKEV+ LAE++L DYIQINIGSL LSANHNILQIVD+C+++EK+ KL LL EI
Sbjct: 306 WSATWPKEVRNLAEEFLNDYIQINIGSLNLSANHNILQIVDVCEDYEKDQKLMKLLTEI- 364
Query: 690 QSQEPGAKTIIFVETKRKAEN 752
S E KTIIFVETKR+ ++
Sbjct: 365 -SAENETKTIIFVETKRRVDD 384
Score = 96.7 bits (230), Expect = 5e-19
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
+QTGSGKTLAYI PA+VHI +Q +RRGDGPIALVLAPTRELAQQIQQVA DFG +
Sbjct: 166 AQTGSGKTLAYIAPALVHITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDFGQRI 222
Score = 41.9 bits (94), Expect = 0.016
Identities = 16/27 (59%), Positives = 24/27 (88%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVAK 98
G+ +PT IQAQG PIA+SG+++VG+A+
Sbjct: 141 GFSKPTAIQAQGMPIALSGRDMVGIAQ 167
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 151 bits (366), Expect = 2e-35
Identities = 71/90 (78%), Positives = 77/90 (85%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R TC+FGGA K Q RDLERGVE+VIATPGRLIDFLE+G TNL+RCTYLVLDEADRMLD
Sbjct: 333 IRYTCIFGGALKGPQVRDLERGVEVVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLD 392
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK 534
MGFEPQIRKIIEQIRPDRQ L PK+
Sbjct: 393 MGFEPQIRKIIEQIRPDRQVLMWSATWPKE 422
Score = 116 bits (278), Expect = 8e-25
Identities = 57/81 (70%), Positives = 66/81 (81%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
WSATWPKEV+ LAED+L DYIQINIGSL LSANHNI QIVD+C+E EKE KL LL+EI
Sbjct: 415 WSATWPKEVQALAEDFLHDYIQINIGSLNLSANHNIHQIVDVCEEGEKEGKLLSLLKEI- 473
Query: 690 QSQEPGAKTIIFVETKRKAEN 752
S + +K IIFVETK+K E+
Sbjct: 474 -SSDVNSKIIIFVETKKKVED 493
Score = 91.9 bits (218), Expect = 2e-17
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPH 259
+QTGSGKTLAY+LP IVHI +Q P++RG+GP+ LVLAPTRELAQQIQ V DFG H
Sbjct: 273 AQTGSGKTLAYMLPGIVHIAHQKPLQRGEGPVVLVLAPTRELAQQIQTVVRDFGTH 328
Score = 49.6 bits (113), Expect = 8e-05
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ MG+ PT IQAQGWPIA+SG++LVG+A+
Sbjct: 244 INKMGFPNPTAIQAQGWPIALSGRDLVGIAQ 274
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 149 bits (362), Expect = 5e-35
Identities = 74/103 (71%), Positives = 78/103 (75%)
Frame = +1
Query: 238 CCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 417
C F + NTC+FGGA K QA DL RGVEIVIATPGRLIDFLE GTTNL+R TYLV
Sbjct: 194 CNDFGRRMSIMNTCIFGGASKHPQADDLRRGVEIVIATPGRLIDFLESGTTNLRRTTYLV 253
Query: 418 LDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
LDEADRMLDMGFEPQIRKII QIRPDRQ L PK+ R L
Sbjct: 254 LDEADRMLDMGFEPQIRKIISQIRPDRQVLMWSATWPKEIRKL 296
Score = 109 bits (263), Expect = 5e-23
Identities = 50/80 (62%), Positives = 67/80 (83%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
WSATWPKE++KLAE++L +YIQINIGSL L+AN NI+QI++ C+E+EKE +L LL E+
Sbjct: 285 WSATWPKEIRKLAEEFLREYIQINIGSLNLAANENIMQIIECCEEYEKETRLFKLLTEL- 343
Query: 690 QSQEPGAKTIIFVETKRKAE 749
SQ+ +K+IIFVETKRK +
Sbjct: 344 -SQQGDSKSIIFVETKRKVD 362
Score = 97.5 bits (232), Expect = 3e-19
Identities = 46/65 (70%), Positives = 54/65 (83%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
++TGSGKTLAYILPA++HI+NQP + RGDGPIALVLAPTRELAQQIQQV DFG M +
Sbjct: 145 AKTGSGKTLAYILPALIHISNQPRLLRGDGPIALVLAPTRELAQQIQQVCNDFG-RRMSI 203
Query: 272 TRVCL 286
C+
Sbjct: 204 MNTCI 208
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVAK 98
G++EPT IQA GW IAMSG+++VG+AK
Sbjct: 120 GFQEPTSIQAVGWSIAMSGRDMVGIAK 146
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 147 bits (357), Expect = 2e-34
Identities = 72/101 (71%), Positives = 79/101 (78%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F +S +RNTCV+GG PK Q RDL RGVE+ IATPGRLID LE G TNL+R TYLVLD
Sbjct: 229 KFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLD 288
Query: 424 EADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
EADRMLDMGFEPQIRKII QIRPDRQTL PK+ R L
Sbjct: 289 EADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRAL 329
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/86 (50%), Positives = 64/86 (74%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT WSATWPKEV+ LA D+L D+IQ+NIGS++L+ANH I QIV++ E EK +++
Sbjct: 313 RQT-LMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVEVVTEMEKRDRMIK 371
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
++++ +++E K +IFV TKR A+
Sbjct: 372 HMEKVMENKE--NKILIFVGTKRVAD 395
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/54 (68%), Positives = 42/54 (77%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
++TGSGKTL Y LP+IVHIN QP + GDGPI LVLAPTRELA QIQ+ FG
Sbjct: 178 AETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFG 231
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAKRWPTSCQP 137
VK G+ PT IQ+QGWP+A+SG+++VG+A+ K T C P
Sbjct: 149 VKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTL-TYCLP 191
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 146 bits (354), Expect = 5e-34
Identities = 72/113 (63%), Positives = 85/113 (75%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F + S R+TC++GGAPK Q RDL RGVEIVIATPGRLID LE G TNL+R TYLVLD
Sbjct: 346 KFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLD 405
Query: 424 EADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLRITWETTFRSI 582
EADRMLDMGFEPQIRKI+ QIRPDRQTL P++ +L R + ++ I
Sbjct: 406 EADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPYKVI 458
Score = 81.4 bits (192), Expect = 2e-14
Identities = 35/56 (62%), Positives = 45/56 (80%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPH 259
+QTGSGKTL+Y+LP +VH+ QP + +GDGPI L+LAPTRELA QIQQ + FG +
Sbjct: 295 AQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFGSY 350
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/86 (41%), Positives = 57/86 (66%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT + WSATWP+EV+ LA +L + ++ IGS L ANH+I QI+++ EHEK +L+
Sbjct: 430 RQTLY-WSATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSK 488
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
LL ++ G++ +IF +TK+ +
Sbjct: 489 LLSDL----MDGSRILIFFQTKKDCD 510
Score = 46.4 bits (105), Expect = 8e-04
Identities = 15/27 (55%), Positives = 25/27 (92%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVAK 98
G+ EPTPIQ+QGWP+A+ G++++G+A+
Sbjct: 270 GFVEPTPIQSQGWPMALKGRDMIGIAQ 296
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 136 bits (328), Expect = 7e-31
Identities = 63/81 (77%), Positives = 70/81 (86%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
++NTC+FGG KR+Q DL+ GVEIVIATPGRLIDFL TNL+RC+YLVLDEADRMLD
Sbjct: 189 IKNTCLFGGGAKRQQGDDLKYGVEIVIATPGRLIDFLSSEHTNLRRCSYLVLDEADRMLD 248
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGFEPQIR IIEQIRPD QTL
Sbjct: 249 MGFEPQIRAIIEQIRPDHQTL 269
Score = 118 bits (284), Expect = 2e-25
Identities = 53/88 (60%), Positives = 69/88 (78%)
Frame = +3
Query: 489 PRQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLN 668
P WSATWP V +L +DYL DYIQIN+GSL+L+ANHNILQI+D+CQEHEKE KL+
Sbjct: 264 PDHQTLMWSATWPDAVSRLVKDYLKDYIQINVGSLKLAANHNILQIIDVCQEHEKEAKLS 323
Query: 669 VLLQEIGQSQEPGAKTIIFVETKRKAEN 752
+LL+EI +E KTIIF+ETK++ ++
Sbjct: 324 ILLREIMAEKE--CKTIIFIETKKRVDD 349
Score = 90.6 bits (215), Expect = 4e-17
Identities = 42/65 (64%), Positives = 53/65 (81%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
++TGSGKTL+Y+LPA++HI+ Q +RRGDGPIAL+LAPTRELAQQI+QV DFG M +
Sbjct: 131 AKTGSGKTLSYLLPALMHIDQQSRLRRGDGPIALILAPTRELAQQIKQVTDDFG-RAMKI 189
Query: 272 TRVCL 286
CL
Sbjct: 190 KNTCL 194
Score = 48.0 bits (109), Expect = 2e-04
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ PTPIQ+QGWPIAMSG+++VG+AK
Sbjct: 107 FTTPTPIQSQGWPIAMSGRDMVGIAK 132
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 133 bits (321), Expect = 5e-30
Identities = 63/99 (63%), Positives = 74/99 (74%)
Frame = +1
Query: 238 CCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 417
C +F T S +RNTC +GG PK Q L++GV I+IA PGRLID LE+ TNL R TYLV
Sbjct: 206 CIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLV 265
Query: 418 LDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK 534
LDEAD+MLDMGFE QIRKI++QIRPDRQTL PK+
Sbjct: 266 LDEADKMLDMGFELQIRKIVDQIRPDRQTLMWSATWPKE 304
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/59 (62%), Positives = 46/59 (77%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
K+ +++TGSGKTLA+ILPA VHI QP ++ GDGPI LVLAPTRELA+QI+Q F
Sbjct: 151 KDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKF 209
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDY-IQINIGSLQLSANHNILQIVDICQE 644
RQT WSATWPKEV+ LA+D + IQ+N+GSL L+A +I Q + + ++
Sbjct: 292 RQT-LMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLED 342
Score = 42.7 bits (96), Expect = 0.009
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +3
Query: 30 PTPIQAQGWPIAMSGKNLVGVAK 98
PTPIQ QGWPIA+SGK+++G A+
Sbjct: 136 PTPIQIQGWPIALSGKDMIGKAE 158
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 133 bits (321), Expect = 5e-30
Identities = 64/103 (62%), Positives = 75/103 (72%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F + +RNT ++GG PKR Q + GVEI IA PGRLID LE+G TNL R TYLVLD
Sbjct: 83 QFGSIFKLRNTAIYGGVPKRPQQASIRNGVEICIACPGRLIDLLEEGYTNLSRVTYLVLD 142
Query: 424 EADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
EADRMLDMGFEPQIRK++ QIRPDRQTL PK+ + L R
Sbjct: 143 EADRMLDMGFEPQIRKLVSQIRPDRQTLLWSATWPKEVQKLAR 185
Score = 77.8 bits (183), Expect = 3e-13
Identities = 34/54 (62%), Positives = 44/54 (81%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
++TGSGKTL ++LPA++HI QP +R GDGPI LVLAPTREL +QI++ A FG
Sbjct: 32 AETGSGKTLGFLLPAMIHIRAQPLLRYGDGPICLVLAPTRELVEQIREQANQFG 85
Score = 73.7 bits (173), Expect = 4e-12
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDY-IQINIGSLQ-LSANHNILQIVDICQEHEKENKL 665
RQT WSATWPKEV+KLA D + I IN+GS+ L A+HNI Q V++ +E EK+ +L
Sbjct: 167 RQT-LLWSATWPKEVQKLARDLCKEIPIHINVGSVDALKASHNIKQYVNVVEESEKKARL 225
Query: 666 NVLLQEIGQSQEPGAKTIIFVETKRKAE 749
+ L ++ P K +IF ETKR A+
Sbjct: 226 KMFLGQVMVESAP--KVLIFCETKRGAD 251
Score = 41.1 bits (92), Expect = 0.029
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +3
Query: 27 EPTPIQAQGWPIAMSGKNLVGVAK 98
EPT IQ QGWP+A+SG +++G+A+
Sbjct: 10 EPTAIQVQGWPVALSGHDMIGIAE 33
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 129 bits (311), Expect = 8e-29
Identities = 62/103 (60%), Positives = 74/103 (71%)
Frame = +1
Query: 238 CCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 417
C +F + + + CV+GGAPK Q ++L G +IVIATPGRLIDFLE +L+R TYLV
Sbjct: 306 CFKFGSKCKISSVCVYGGAPKIYQEKELRNGCDIVIATPGRLIDFLESNVIDLKRVTYLV 365
Query: 418 LDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
LDEADRMLDMGFEP IRKI+ QIRPDRQTL P+ R L
Sbjct: 366 LDEADRMLDMGFEPSIRKIVGQIRPDRQTLMFSATWPQTVRRL 408
Score = 83.4 bits (197), Expect = 5e-15
Identities = 39/65 (60%), Positives = 51/65 (78%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
+QTGSGKTL+++LPA+VHIN Q P++ G+GPIALVLAPTRELA QIQ+ FG +
Sbjct: 257 AQTGSGKTLSFMLPALVHINAQDPVKPGEGPIALVLAPTRELANQIQEQCFKFGSKCK-I 315
Query: 272 TRVCL 286
+ VC+
Sbjct: 316 SSVCV 320
Score = 56.8 bits (131), Expect = 5e-07
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENKLN 668
RQT +SATWP+ V++LA D+ GD I I IG ++ + N++I Q V+I + +K +++
Sbjct: 392 RQT-LMFSATWPQTVRRLALDFCHGDPIHIQIGDMENNVNNDIDQQVEIIDKSQKYDRVK 450
Query: 669 VLLQEIGQSQEPGAKTIIFVETKRKAEN 752
+L + +S KTIIF +TK+ ++
Sbjct: 451 EILSTMTRSD----KTIIFTQTKKDCDD 474
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 128 bits (310), Expect = 1e-28
Identities = 63/96 (65%), Positives = 72/96 (75%)
Frame = +1
Query: 247 FWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 426
F +S ++ + +GG PKR Q L RGVEI+IA PGRLIDFLE TNL+R TYLVLDE
Sbjct: 306 FGRSSKLKTSVAYGGVPKRFQTIALRRGVEILIACPGRLIDFLESSVTNLRRVTYLVLDE 365
Query: 427 ADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK 534
ADRMLDMGFEPQIRKI+ QIRPDRQTL PK+
Sbjct: 366 ADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPKE 401
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/54 (70%), Positives = 46/54 (85%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
++TGSGKTLA++LPAIVHIN Q +R GDGPI LVLAPTRELA+QI++ A FG
Sbjct: 254 AETGSGKTLAFLLPAIVHINAQALLRPGDGPIVLVLAPTRELAEQIKETALVFG 307
Score = 64.1 bits (149), Expect = 4e-09
Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEHEKENKLN 668
RQT +SATWPKEV L+ L + + +NIGSL L+ HNI Q V I +E EK KL
Sbjct: 389 RQT-LMFSATWPKEVIALSRSLLSHEVVHVNIGSLDLTTCHNIEQNVFILEEREKRVKLK 447
Query: 669 VLLQEIGQSQEPGAKTIIFVETKRKAE 749
LL+++ G K +IF ETK+ A+
Sbjct: 448 ELLKKL----MDGGKILIFSETKKGAD 470
Score = 50.4 bits (115), Expect = 5e-05
Identities = 17/31 (54%), Positives = 27/31 (87%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ G+KEPTPIQ Q WPIA+SG++++G+A+
Sbjct: 225 IEAAGFKEPTPIQVQSWPIALSGRDMIGIAE 255
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 128 bits (310), Expect = 1e-28
Identities = 64/101 (63%), Positives = 76/101 (75%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
RF +S ++ C++GGA K Q L++GV++VIATPGRLIDFLE TT L+R TYLVLD
Sbjct: 196 RFGKSSKLKCACIYGGADKYSQRALLQQGVDVVIATPGRLIDFLESETTTLRRVTYLVLD 255
Query: 424 EADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
EADRMLDMGFE QIRKI+ QIRPDRQTL PK +NL
Sbjct: 256 EADRMLDMGFEIQIRKILGQIRPDRQTLMFSATWPKNVQNL 296
Score = 81.8 bits (193), Expect = 2e-14
Identities = 35/54 (64%), Positives = 47/54 (87%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
++TGSGKTL+++LP+IVHIN QP +++GDGPI LVLAPTRELA QI++ + FG
Sbjct: 145 AETGSGKTLSFLLPSIVHINAQPTVKKGDGPIVLVLAPTRELAMQIERESERFG 198
Score = 52.8 bits (121), Expect = 9e-06
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDY-IQINIGSLQLSANHNILQIVDICQEHEKENKLN 668
RQT +SATWPK V+ LA+DY + + + IG +L+ N I QIV + + +K N+L
Sbjct: 280 RQT-LMFSATWPKNVQNLAQDYCKNTPVYVQIGKHELAINERIKQIVYVTDQSKKINQLI 338
Query: 669 VLLQEIGQSQEPGAKTIIFVETKRKAEN 752
L + Q K +IF +TK+ E+
Sbjct: 339 KQLDCLTQKD----KVLIFAQTKKGCES 362
Score = 33.1 bits (72), Expect = 7.6
Identities = 10/26 (38%), Positives = 22/26 (84%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
+++P+PIQ+ +P+ +SG +L+G+A+
Sbjct: 121 FEKPSPIQSLAFPVVLSGHDLIGIAE 146
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 124 bits (300), Expect = 2e-27
Identities = 62/96 (64%), Positives = 72/96 (75%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F +S ++NTC++GG PK Q RDL++GVEIVIATPGRLID LE TNL+R T +VLD
Sbjct: 191 KFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLRRVT-IVLD 249
Query: 424 EADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPK 531
EADRMLDMGFEPQIRK I PDRQTL PK
Sbjct: 250 EADRMLDMGFEPQIRKCISD-TPDRQTLYWSATWPK 284
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
++TGSGKT+AY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG
Sbjct: 140 AETGSGKTIAYLLPAIVHVNAQPILDHGDGPIVLVLAPTRELAVQIQQEATKFG 193
Score = 49.6 bits (113), Expect = 8e-05
Identities = 17/31 (54%), Positives = 27/31 (87%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ G+ EPTPIQAQGWP+A+ G++L+G+A+
Sbjct: 111 IEKAGFTEPTPIQAQGWPMALKGRDLIGIAE 141
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 124 bits (299), Expect = 2e-27
Identities = 58/101 (57%), Positives = 75/101 (74%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F +S + + C++GGAPK Q RDLERG +IV+ATPGRL D LE +L + +YLVLD
Sbjct: 325 KFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLD 384
Query: 424 EADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
EADRMLDMGFEPQIRKI++Q++P RQTL PK+ R +
Sbjct: 385 EADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKI 425
Score = 77.8 bits (183), Expect = 3e-13
Identities = 40/88 (45%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +3
Query: 489 PRQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNILQIVDICQEHEKENKL 665
P++ ++ATWPKEV+K+A D L + +Q+NIG+ QL AN +I Q VD+ EK +L
Sbjct: 407 PKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRL 466
Query: 666 NVLLQEIGQSQEPGAKTIIFVETKRKAE 749
+ +L +SQEPG+K IIF TKR +
Sbjct: 467 DQIL----RSQEPGSKIIIFCSTKRMCD 490
Score = 56.8 bits (131), Expect = 5e-07
Identities = 31/65 (47%), Positives = 40/65 (61%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
++TGSGKTL Y++P + + R DGP LVL+PTRELA QIQ A FG +
Sbjct: 275 AKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELATQIQDEAKKFG-RSSRI 332
Query: 272 TRVCL 286
+ VCL
Sbjct: 333 SSVCL 337
Score = 43.2 bits (97), Expect = 0.007
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
V+ G+ PTPIQAQ WPIA+ +++V VAK
Sbjct: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAK 276
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 124 bits (299), Expect = 2e-27
Identities = 60/117 (51%), Positives = 82/117 (70%)
Frame = +1
Query: 196 LGAYQRVSTTNSASCCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 375
L + ++T +F +S + +TC++GGAPK Q RDL+RGV++V+ATPGRL D L
Sbjct: 228 LAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDIL 287
Query: 376 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
E +L++ +YLVLDEADRMLDMGFEPQIRKI+++I P RQTL PK+ R +
Sbjct: 288 EMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRI 344
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +3
Query: 489 PRQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNILQIVDICQEHEKENKL 665
PR+ ++ATWPKEV+++AED L +Q+ IGS+ +L AN I Q V++ EK +
Sbjct: 326 PRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRR- 384
Query: 666 NVLLQEIGQSQEPGAKTIIFVETKRKAE 749
L++I +SQ+ G+K +IF TKR +
Sbjct: 385 ---LEQILRSQDSGSKVLIFCTTKRMCD 409
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
++TGSGKTL Y+LP +HI R GP LVLAPTRELA QI + A FG
Sbjct: 194 AKTGSGKTLGYLLPGFMHIKRLQNNPRS-GPTVLVLAPTRELATQILEEAVKFG 246
Score = 41.1 bits (92), Expect = 0.029
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ G+ PTPIQAQ WPIA+ +++V +AK
Sbjct: 165 IQRAGFSSPTPIQAQSWPIALQCQDVVAIAK 195
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 120 bits (290), Expect = 3e-26
Identities = 60/94 (63%), Positives = 65/94 (69%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+ TCV+GG PK Q R L GV + IATPGRLID LE TNL R TYL LDEADRMLD
Sbjct: 248 IMTTCVYGGTPKGPQQRALRAGVHVCIATPGRLIDLLETNCTNLLRVTYLTLDEADRMLD 307
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
MGFE QIRKI QIR DRQTL P++ RNL
Sbjct: 308 MGFEDQIRKICSQIRTDRQTLMFSATWPREIRNL 341
Score = 73.3 bits (172), Expect = 6e-12
Identities = 32/47 (68%), Positives = 42/47 (89%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ 232
++TGSGKT+A+++PA +HI QPP++ GDGPIALVLAPTRELA QI+
Sbjct: 189 AKTGSGKTMAFMIPAALHIMAQPPLQPGDGPIALVLAPTRELAVQIE 235
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/88 (34%), Positives = 57/88 (64%)
Frame = +3
Query: 486 TPRQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 665
T RQT +SATWP+E++ LA + D+++++IGS +L AN ++ Q V + + + KE K+
Sbjct: 323 TDRQT-LMFSATWPREIRNLAASFQKDFVRVHIGSEELVANADVHQHVFVVEGYHKEEKM 381
Query: 666 NVLLQEIGQSQEPGAKTIIFVETKRKAE 749
+L+++G + ++FV+TK+ +
Sbjct: 382 EEILRQVGPQ-----RVLVFVKTKKSCD 404
Score = 39.9 bits (89), Expect = 0.066
Identities = 13/27 (48%), Positives = 23/27 (85%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVAK 98
G+++PTPIQ+ WP+ ++ +++VGVAK
Sbjct: 164 GFQKPTPIQSVSWPVLLNSRDIVGVAK 190
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 118 bits (285), Expect = 1e-25
Identities = 58/90 (64%), Positives = 67/90 (74%)
Frame = +1
Query: 277 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 456
CV+GGAPK Q L RGV I++ATPGRLIDFL+ NL R TYLVLDEADRMLDMGFE
Sbjct: 207 CVYGGAPKGPQLGLLRRGVHILVATPGRLIDFLDIKRINLHRVTYLVLDEADRMLDMGFE 266
Query: 457 PQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
PQ+RKI QIRPDRQT+ P++ + L
Sbjct: 267 PQVRKICGQIRPDRQTVMFSATWPREIQRL 296
Score = 70.9 bits (166), Expect = 3e-11
Identities = 30/48 (62%), Positives = 41/48 (85%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 235
++TGSGKTL +++PA+ HI Q P+R GDGP+ +VLAPTRELAQQI++
Sbjct: 146 AKTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAPTRELAQQIEE 193
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/86 (34%), Positives = 55/86 (63%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SATWP+E+++LA ++ +I+I++GS +L AN ++ Q + QE K+++L
Sbjct: 280 RQTVM-FSATWPREIQRLAAEFQKQWIRISVGSTELQANKDVTQRFILTQEFAKQDELRK 338
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
L+QE + + ++F + KR A+
Sbjct: 339 LMQEHREE-----RVLVFCKMKRTAD 359
Score = 44.0 bits (99), Expect = 0.004
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ PTP+QAQ WP+ +SG++LVGVAK
Sbjct: 122 FTAPTPVQAQSWPVLLSGRDLVGVAK 147
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 118 bits (283), Expect = 2e-25
Identities = 59/117 (50%), Positives = 77/117 (65%)
Frame = +1
Query: 196 LGAYQRVSTTNSASCCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 375
L + ++T RF +S + TC++GGAPK Q ++LERG +IV+ATPGRL D L
Sbjct: 513 LAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDIL 572
Query: 376 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
E + Q+ + LVLDEADRMLDMGFEPQIRKI+ +I P RQTL PK+ R +
Sbjct: 573 EMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKI 629
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +3
Query: 489 PRQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNILQIVDICQEHEKENKL 665
PR+ ++ATWPKEV+K+A D L + +Q+NIG + +L+AN I Q V++ + EKE +
Sbjct: 611 PRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERR- 669
Query: 666 NVLLQEIGQSQEPGAKTIIFVETKRKAEN 752
L++I +SQE G+K IIF TKR ++
Sbjct: 670 ---LEQILRSQERGSKVIIFCSTKRLCDH 695
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
++TGSGKTL Y++PA + + + R +GP L+LAPTRELA QIQ A FG
Sbjct: 479 AKTGSGKTLGYLIPAFILLRHCRNDSR-NGPTVLILAPTRELATQIQDEALRFG 531
Score = 41.1 bits (92), Expect = 0.029
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVAK 98
G+ PTPIQAQ WPIA+ +++V +AK
Sbjct: 454 GFPSPTPIQAQTWPIALQSRDIVAIAK 480
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 116 bits (278), Expect = 8e-25
Identities = 53/89 (59%), Positives = 66/89 (74%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
++GGA K Q R+L+ G EI++ATPGRL++FL GT L R +Y V+DEADRMLDMGFEP
Sbjct: 425 IYGGASKFAQVRELQNGAEIMVATPGRLLEFLSNGTIKLNRVSYFVMDEADRMLDMGFEP 484
Query: 460 QIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
QIRKI+ QIRPDRQTL P + + L
Sbjct: 485 QIRKIVGQIRPDRQTLMFSATWPSEIKRL 513
Score = 63.3 bits (147), Expect = 6e-09
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
SQTGSGKTL ++LP ++H+ QPP+ G GPI L+L+PTREL QI + A +
Sbjct: 363 SQTGSGKTLTFLLPGLLHLLAQPPVGTG-GPIMLILSPTRELCLQIAEEARPY 414
Score = 52.8 bits (121), Expect = 9e-06
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENKLN 668
RQT +SATWP E+K+LA ++ + I I +G L+L+AN NI Q V+ +E +KL
Sbjct: 497 RQT-LMFSATWPSEIKRLASEFCKANSIYIQVGDLELTANPNIRQNVEFPNSYEVRDKLF 555
Query: 669 VLLQEIGQSQEPGAKTIIFVETKRKAE 749
L I P K +IF + K A+
Sbjct: 556 DFLGSI----PPEKKVLIFSDLKSFAD 578
Score = 36.7 bits (81), Expect = 0.61
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K + EPTPIQ GW ++G++++GV++
Sbjct: 334 IKESNFTEPTPIQKVGWTSCLTGRDIIGVSQ 364
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 116 bits (278), Expect = 8e-25
Identities = 56/117 (47%), Positives = 77/117 (65%)
Frame = +1
Query: 196 LGAYQRVSTTNSASCCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 375
L + ++T +F +S + C++GGAPK Q +++ERGV+IV+ATPGRL D L
Sbjct: 239 LSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDIL 298
Query: 376 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
E +L + +YLVLDEADRMLDMGFEPQIRKI+ ++ RQTL PK+ R +
Sbjct: 299 EMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKI 355
Score = 72.5 bits (170), Expect = 1e-11
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +3
Query: 486 TPRQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNILQIVDICQEHEKENK 662
T RQT ++ATWPKEV+K+A D L + Q+NIG++ +L AN +I Q +++ EK ++
Sbjct: 337 TKRQT-LMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSR 395
Query: 663 LNVLLQEIGQSQEPGAKTIIFVETKRKAE 749
L++I +SQEPG+K IIF TKR +
Sbjct: 396 ----LEQILRSQEPGSKIIIFCSTKRMCD 420
Score = 53.6 bits (123), Expect = 5e-06
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
++TGSGKTL Y++P +H+ R GP LVL+PTRELA QIQ A FG
Sbjct: 205 AKTGSGKTLGYLIPGFMHLQRIHNDSRM-GPTILVLSPTRELATQIQVEALKFG 257
Score = 42.3 bits (95), Expect = 0.012
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
V + G+ P+PIQAQ WPIAM +++V +AK
Sbjct: 176 VYSAGFSAPSPIQAQSWPIAMQNRDIVAIAK 206
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 115 bits (277), Expect = 1e-24
Identities = 54/93 (58%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Frame = +1
Query: 238 CCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCT 408
C F +R C +GGAP ++Q DL+RG EIV+ TPGR+ID L TNL RCT
Sbjct: 511 CKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCT 570
Query: 409 YLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 507
YLVLDEADRM D+GFEPQ+ +II IRPDRQT+
Sbjct: 571 YLVLDEADRMFDLGFEPQVMRIINNIRPDRQTV 603
Score = 64.5 bits (150), Expect = 3e-09
Identities = 26/46 (56%), Positives = 38/46 (82%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
++TGSGKT+A++LP HI +Q P++ G+GPIA+++ PTRELA QI
Sbjct: 462 AKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQI 507
Score = 39.1 bits (87), Expect = 0.12
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ ++GY++PT IQAQ P SG++++GVAK
Sbjct: 433 INSLGYEKPTSIQAQAIPAITSGRDVIGVAK 463
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 113 bits (272), Expect = 4e-24
Identities = 57/107 (53%), Positives = 68/107 (63%)
Frame = +1
Query: 232 ASCCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 411
A C RF +R+ V+GG EQA+ L+ G EIV+ TPGRLID ++K TNLQR +Y
Sbjct: 344 AECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSY 403
Query: 412 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
LV DEADRM DMGFE Q+R I +RPDRQTL KK L R
Sbjct: 404 LVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLAR 450
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
++TGSGKT A+I P ++HI +Q + GDGPIA+++ PTREL QQI FG
Sbjct: 297 AKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFG 350
Score = 43.2 bits (97), Expect = 0.007
Identities = 15/31 (48%), Positives = 25/31 (80%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ Y +PTPIQ QG P+A+SG++++G+AK
Sbjct: 268 IRKSEYTQPTPIQCQGVPVALSGRDMIGIAK 298
Score = 41.9 bits (94), Expect = 0.016
Identities = 31/86 (36%), Positives = 49/86 (56%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+ K+++KLA D L D I++ G + AN ++ QIV+I H +K N
Sbjct: 432 RQT-LLFSATFRKKIEKLARDILIDPIRVVQGDIG-EANEDVTQIVEIL--HSGPSKWNW 487
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
L + + + G+ ++FV K AE
Sbjct: 488 LTRRLVEFTSSGS-VLLFVTKKANAE 512
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 112 bits (270), Expect = 8e-24
Identities = 56/103 (54%), Positives = 66/103 (64%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
RF + VFGG K EQ++ L+ G EIV+ATPGRLID ++ TNL R TYLV D
Sbjct: 201 RFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFD 260
Query: 424 EADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
EADRM DMGFEPQ+R I +RPDRQTL KK +L R
Sbjct: 261 EADRMFDMGFEPQVRSIANNVRPDRQTLLFSATFKKKVEHLCR 303
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/54 (59%), Positives = 41/54 (75%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
++TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG
Sbjct: 150 AKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFG 203
Score = 39.9 bits (89), Expect = 0.066
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK----RVPAKRWP 122
++ + Y +PT IQ Q PIA+SG++++G+AK + A WP
Sbjct: 121 IRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWP 163
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 112 bits (269), Expect = 1e-23
Identities = 48/88 (54%), Positives = 67/88 (76%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F + ++ FGG P+ Q +D + G +I +ATPGRLIDF+++G T+L RCT+L+LD
Sbjct: 248 KFTKGTAIKTVRCFGGVPQSSQMKDFQSGCDICVATPGRLIDFIKRGVTSLSRCTFLILD 307
Query: 424 EADRMLDMGFEPQIRKIIEQIRPDRQTL 507
EADRML+MGFE Q++ II QIRPDRQT+
Sbjct: 308 EADRMLEMGFEVQVQDIIGQIRPDRQTV 335
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/87 (40%), Positives = 61/87 (70%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT W+ATWP+ +++ A ++ +QINIG+ L AN ++ QI+++CQE ++++K+N
Sbjct: 332 RQTVM-WTATWPQAIQQFALGFMFHPLQINIGNPDLHANESVKQIIEVCQERDRDSKMNE 390
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAEN 752
+++ IG + K +IFV+TKR A+N
Sbjct: 391 IVKRIGSEK----KVLIFVKTKRSADN 413
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
++TGSGKT+++++PAI+HI + P + +GP L+LAPTREL QI A F
Sbjct: 197 AETGSGKTISFLIPAIIHILDTPLAQYREGPRVLILAPTRELVCQIADEAIKF 249
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K Y +PTPIQA GWPI + GK++VG+A+
Sbjct: 168 IKEQNYIKPTPIQAIGWPIVLQGKDVVGIAE 198
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 112 bits (269), Expect = 1e-23
Identities = 57/101 (56%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Frame = +1
Query: 247 FWTTSYVRNT-CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+++ +Y N+ C++GGA KR Q L R +IV+ATPGRLIDFL+ TNL TYLVLD
Sbjct: 163 YFSEAYNMNSACIYGGADKRPQEMALARDPDIVVATPGRLIDFLDAQVTNLHNVTYLVLD 222
Query: 424 EADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
EADRMLDMGFE Q+RKI IR DRQT+ PK +NL
Sbjct: 223 EADRMLDMGFEQQVRKIDSYIREDRQTVFFSATWPKTVQNL 263
Score = 62.9 bits (146), Expect = 8e-09
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 235
+QTGSGKT+AY+LP +VHI +Q R+ GP+ L+L PTRELA QIQ+
Sbjct: 115 AQTGSGKTIAYLLPGLVHIESQ---RKKGGPMMLILVPTRELAMQIQE 159
Score = 56.4 bits (130), Expect = 7e-07
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENKLN 668
RQT F +SATWPK V+ LA D + I + IGS +++ N NI Q ++EK+ +L
Sbjct: 247 RQTVF-FSATWPKTVQNLACDLCHNEPINLYIGSQEVTINKNITQETICLYQNEKQEELL 305
Query: 669 VLLQEIGQSQEPGAKTIIFVETKRKAEN 752
+L+E+ K +IFVETK+ E+
Sbjct: 306 YILEELSNKD----KVLIFVETKKDCED 329
Score = 37.9 bits (84), Expect = 0.27
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ Y PTPIQA +PI MSG +L+G+A+
Sbjct: 86 ISLKAYNRPTPIQASVFPIIMSGHDLIGIAQ 116
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 111 bits (268), Expect = 1e-23
Identities = 59/92 (64%), Positives = 67/92 (72%), Gaps = 5/92 (5%)
Frame = +1
Query: 292 APKREQARDLER-----GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 456
AP RE A +++ GVEIVIATPGRLID +E TNL+R TYLVLDEADRMLDMGFE
Sbjct: 173 APTRELAVQIQQEATKFGVEIVIATPGRLIDMIESHHTNLRRITYLVLDEADRMLDMGFE 232
Query: 457 PQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
PQI+KI+ QIRPDRQTL PK+ L R
Sbjct: 233 PQIKKIVSQIRPDRQTLYWSATWPKEVEQLAR 264
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/70 (60%), Positives = 53/70 (75%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
++TGSGKTLAY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG ++
Sbjct: 137 AETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFGVEIVIA 196
Query: 272 TRVCLVVLLK 301
T L+ +++
Sbjct: 197 TPGRLIDMIE 206
Score = 73.3 bits (172), Expect = 6e-12
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT + WSATWPKEV++LA ++L D ++ IGS +L ANH I Q V+I E +K NKL
Sbjct: 246 RQTLY-WSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVN 304
Query: 672 LLQEIGQSQEPGAKTIIFVETKR 740
LL++I G++ +IF++TK+
Sbjct: 305 LLEDI----MDGSRILIFMDTKK 323
Score = 46.8 bits (106), Expect = 6e-04
Identities = 16/27 (59%), Positives = 25/27 (92%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVAK 98
G+ EPTPIQ+QGWP+A+ G++L+G+A+
Sbjct: 112 GFVEPTPIQSQGWPMALRGRDLIGIAE 138
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 111 bits (266), Expect = 2e-23
Identities = 55/99 (55%), Positives = 69/99 (69%), Gaps = 3/99 (3%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADR 435
+R CV+GGAP EQ ++++ +IV+ATPGRLID L + TNL R TYLVLDEADR
Sbjct: 578 LRAACVYGGAPISEQIAEMKKTADIVVATPGRLIDLLTANSGRVTNLYRVTYLVLDEADR 637
Query: 436 MLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
M DMGFEPQ+ KI+ IRPDRQT+ PK+ +L R
Sbjct: 638 MFDMGFEPQVMKILNNIRPDRQTVLFSATFPKQMESLAR 676
Score = 59.7 bits (138), Expect = 8e-08
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
++TGSGKT+A++LP HI +Q P+ +GP+ +++ PTRELA QI + F
Sbjct: 520 AKTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGIIMTPTRELAVQIYREMRPF 572
Score = 44.8 bits (101), Expect = 0.002
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K +GY PTPIQ+Q P MSG++++GVAK
Sbjct: 491 IKRLGYSAPTPIQSQAMPAIMSGRDIIGVAK 521
Score = 42.3 bits (95), Expect = 0.012
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDY-IQINIGSLQLSANHNILQIVDICQEHEKENKLN 668
RQT +SAT+PK+++ LA L + ++I +G + A I QIV++ E K ++L
Sbjct: 658 RQTVL-FSATFPKQMESLARKVLKNKPLEITVGGRSVVA-AEIEQIVEVRSEDTKFHRLL 715
Query: 669 VLLQEIGQSQEPGAKTIIFVETKRKAEN 752
+L E+ ++E A+T+IFV+ + A++
Sbjct: 716 EILGEL-YNREKDARTLIFVDRQEAADD 742
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 110 bits (265), Expect = 3e-23
Identities = 54/119 (45%), Positives = 76/119 (63%)
Frame = +1
Query: 151 QPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTTSYVRNTCVFGGAPKREQARDLERG 330
QP+ +R L + ++ CC++ + +R+ CV+GG + EQ +L++G
Sbjct: 307 QPSLKGQRNRPGMLVLTPTRELALQVEGECCKY-SYKGLRSVCVYGGGNRDEQIEELKKG 365
Query: 331 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 507
V+I+IATPGRL D NL+ TYLVLDEAD+MLDMGFEPQI KI+ +RPDRQT+
Sbjct: 366 VDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTV 424
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/48 (47%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQ 232
+QTG+GKTL Y++P +H+ QP ++ + + P LVL PTRELA Q++
Sbjct: 286 AQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVE 333
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/80 (32%), Positives = 44/80 (55%)
Frame = +3
Query: 513 SATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQ 692
SATWP V +LA+ YL + + + +G+L L A ++ Q + + E EK + + LQ +
Sbjct: 427 SATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSS 486
Query: 693 SQEPGAKTIIFVETKRKAEN 752
+ K I+FV K A++
Sbjct: 487 TD----KVIVFVSRKAVADH 502
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K G+++PTPIQ+Q WPI + G +L+GVA+
Sbjct: 257 IKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQ 287
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 110 bits (264), Expect = 4e-23
Identities = 52/93 (55%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Frame = +1
Query: 238 CCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCT 408
C F +R C +GGAP REQ +L+RG EI++ TPGR+ID L TNL+R T
Sbjct: 690 CKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVT 749
Query: 409 YLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 507
Y+VLDEADRM DMGFEPQ+ KI +RPDRQT+
Sbjct: 750 YVVLDEADRMFDMGFEPQVMKIFANMRPDRQTI 782
Score = 66.1 bits (154), Expect = 9e-10
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
++TGSGKT+A++LP HI +QPP++ DGPI L++ PTRELA QI + F +M +
Sbjct: 641 AKTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTRELAVQIHKDCKPF-LKMMGL 699
Query: 272 TRVC 283
VC
Sbjct: 700 RAVC 703
Score = 42.7 bits (96), Expect = 0.009
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
V +GY++PTPIQ Q P MSG++++GVAK
Sbjct: 612 VDNLGYEKPTPIQMQALPALMSGRDVIGVAK 642
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 109 bits (262), Expect = 7e-23
Identities = 53/96 (55%), Positives = 66/96 (68%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R + V+GG K EQ ++L+ G EIV+ATPGRLID L+ + R +YLVLDEADRM D
Sbjct: 330 LRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFD 389
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
+GFEPQ+R I+ QIRPDRQTL P K L R
Sbjct: 390 LGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAR 425
Score = 66.5 bits (155), Expect = 7e-10
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
++TGSGKT A++LP IVHI +QP ++R +GPI ++ APTRELA QI A F
Sbjct: 272 AKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKF 324
Score = 39.1 bits (87), Expect = 0.12
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K Y++PT IQ Q PI +SG++++G+AK
Sbjct: 243 IKKQAYEKPTAIQCQALPIVLSGRDVIGIAK 273
Score = 38.3 bits (85), Expect = 0.20
Identities = 27/82 (32%), Positives = 47/82 (57%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT P +V+KLA + L D I++ +G + + AN +I Q+V++ + KL
Sbjct: 407 RQT-LLFSATMPWKVEKLAREILSDPIRVTVGEVGM-ANEDITQVVNVIPSDAE--KLPW 462
Query: 672 LLQEIGQSQEPGAKTIIFVETK 737
LL+++ + G ++F K
Sbjct: 463 LLEKLPGMIDEG-DVLVFASKK 483
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 109 bits (261), Expect = 9e-23
Identities = 53/94 (56%), Positives = 65/94 (69%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R TC+FGGA + QA DL +V+ATPGRLIDF+E G + R +LVLDEAD+MLD
Sbjct: 227 IRQTCLFGGAGRGPQANDLRHLPSLVVATPGRLIDFIEGGQCPMNRVNFLVLDEADQMLD 286
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
MGFEPQIRKII I DRQT+ PK+ + L
Sbjct: 287 MGFEPQIRKIIGHISKDRQTMMFSATWPKEIQQL 320
Score = 81.8 bits (193), Expect = 2e-14
Identities = 39/65 (60%), Positives = 51/65 (78%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
++TGSGKT A+++PA+VHI Q P+ RGDGPI LVL+PTRELAQQI +VA F +LM +
Sbjct: 169 AKTGSGKTAAFLIPAMVHIGLQEPMYRGDGPIVLVLSPTRELAQQIAEVAKGFCDNLM-I 227
Query: 272 TRVCL 286
+ CL
Sbjct: 228 RQTCL 232
Score = 64.1 bits (149), Expect = 4e-09
Identities = 36/87 (41%), Positives = 53/87 (60%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SATWPKE+++LA D+L D + + IG+ L+ N NI Q++ C+E EK +K
Sbjct: 304 RQT-MMFSATWPKEIQQLAADFLVDPVHMIIGNKDLTTNSNIKQVITKCEEFEKLSKCLE 362
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAEN 752
+L E K IIF +TKR ++
Sbjct: 363 VLNE-----HKDDKIIIFTKTKRTTDD 384
Score = 34.3 bits (75), Expect = 3.3
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
+++PTPIQ+ P+A+ G +L+G+AK
Sbjct: 145 WEKPTPIQSVSIPVALKGHDLIGIAK 170
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 109 bits (261), Expect = 9e-23
Identities = 52/101 (51%), Positives = 71/101 (70%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F S + C++GG + Q L +G +I+IA PGRLID L++G T L++ ++LVLD
Sbjct: 226 KFSVGSQLYAACLYGGQDRYIQKSQLRKGPQILIACPGRLIDLLDQGCTTLKQVSFLVLD 285
Query: 424 EADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
EADRMLDMGFEPQIRKI++QIRP RQT+ PK+ + L
Sbjct: 286 EADRMLDMGFEPQIRKIVDQIRPQRQTMLFSATWPKEVQKL 326
Score = 54.0 bits (124), Expect = 4e-06
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
+QTGSGKTLA++LPAIVHI Q R P L+LAPTREL QI
Sbjct: 178 AQTGSGKTLAFLLPAIVHILAQ---ARSHDPKCLILAPTRELTLQI 220
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Frame = +3
Query: 489 PRQTDFEWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 665
P++ +SATWPKEV+KLA D+ + + I IG+++L++N I QIV + + +K +
Sbjct: 308 PQRQTMLFSATWPKEVQKLALDFCKQEPVHIQIGNVELTSNRMIKQIVYVMKAIDKNQRY 367
Query: 666 N 668
N
Sbjct: 368 N 368
Score = 42.3 bits (95), Expect = 0.012
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVAK 98
G+K PT IQAQGW IA++G +L+G+A+
Sbjct: 153 GFKGPTAIQAQGWSIALTGHDLIGIAQ 179
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 108 bits (260), Expect = 1e-22
Identities = 52/90 (57%), Positives = 68/90 (75%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
+ GG K EQ + L+ GVEI+IATPGRL++ ++K TNL+RCTY+V+DEAD+M MGFE
Sbjct: 169 LLGGENKHEQWKMLKAGVEILIATPGRLMEMIQKKATNLRRCTYVVIDEADKMFSMGFEK 228
Query: 460 QIRKIIEQIRPDRQTLSGQLLGPKK*RNLL 549
QIR I++QIRPDRQTL KK +NL+
Sbjct: 229 QIRSIMQQIRPDRQTLLFTATLKKKIQNLV 258
Score = 61.3 bits (142), Expect = 2e-08
Identities = 24/46 (52%), Positives = 37/46 (80%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
++TGSGKT++Y+ P ++HI +Q + + +GPI L+LAPTREL QQ+
Sbjct: 106 AKTGSGKTVSYLWPLLIHILDQRELEKNEGPIGLILAPTRELCQQV 151
Score = 37.5 bits (83), Expect = 0.35
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ +G+++PT IQ Q P +SG+++VGVAK
Sbjct: 77 ITKLGFEKPTQIQCQALPCGLSGRDIVGVAK 107
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 108 bits (259), Expect = 2e-22
Identities = 54/108 (50%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
Frame = +1
Query: 238 CCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL---EKGTTNLQRCT 408
C +F +R CV+GGA EQ +L+RG +IV+ TPGR+ID L + TNL+R T
Sbjct: 602 CKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVT 661
Query: 409 YLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
+LVLDEADRM DMGF PQI I++ IRPDRQT+ P K N+ +
Sbjct: 662 FLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSATFPPKVENVAK 709
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
++TGSGKTLA++LP HI QP G+G IAL+++PTRELA QI
Sbjct: 553 ARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQI 598
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K Y++PT IQAQ P M+G++L+G+A+
Sbjct: 524 LKKFQYEKPTSIQAQTIPAIMNGRDLIGIAR 554
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 108 bits (259), Expect = 2e-22
Identities = 53/94 (56%), Positives = 66/94 (70%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R+T V+GGA + Q R L G E+VIATPGRLID ++G L R T+LVLDEADRMLD
Sbjct: 189 LRSTAVYGGASSQPQIRALHEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEADRMLD 248
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
MGFEPQ+RKII + +RQTL P++ R L
Sbjct: 249 MGFEPQLRKIIPKTNANRQTLMWSATWPREVRGL 282
Score = 81.8 bits (193), Expect = 2e-14
Identities = 36/53 (67%), Positives = 45/53 (84%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
+QTGSGKTL++ILPA+VH +Q P+RRGDGPI LVLAPTREL QI++V +F
Sbjct: 131 AQTGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEF 183
Score = 76.6 bits (180), Expect = 6e-13
Identities = 39/90 (43%), Positives = 54/90 (60%)
Frame = +3
Query: 483 NTPRQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENK 662
N RQT WSATWP+EV+ LAE Y+ +YIQ+ +G+ +L N I QIV++C EKE+K
Sbjct: 263 NANRQT-LMWSATWPREVRGLAESYMNEYIQVVVGNEELKTNSKIKQIVEVCSGREKEDK 321
Query: 663 LNVLLQEIGQSQEPGAKTIIFVETKRKAEN 752
L +L G K I+F KR ++
Sbjct: 322 LIGVLDNF-----KGDKVIVFCNMKRTCDD 346
Score = 45.6 bits (103), Expect = 0.001
Identities = 16/27 (59%), Positives = 24/27 (88%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVAK 98
G+ EPT IQ QGWP+A+SG+++VG+A+
Sbjct: 106 GFSEPTAIQGQGWPMALSGRDMVGIAQ 132
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 107 bits (256), Expect = 4e-22
Identities = 51/99 (51%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADR 435
+R CV+GG EQ +L+RG EI++ TPGR+ID L + TNL+R TY+VLDEADR
Sbjct: 612 LRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADR 671
Query: 436 MLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
M DMGFEPQ+ +II+ +RPDRQT+ P++ L R
Sbjct: 672 MFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALAR 710
Score = 63.3 bits (147), Expect = 6e-09
Identities = 30/57 (52%), Positives = 39/57 (68%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
++TGSGKTLA+ILP HI +QP + GDG IA+++APTREL QI + F L
Sbjct: 554 AKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSL 610
Score = 41.5 bits (93), Expect = 0.022
Identities = 15/31 (48%), Positives = 25/31 (80%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ +G+++PTPIQ Q P MSG++L+G+AK
Sbjct: 525 LRRLGFEKPTPIQCQAIPAIMSGRDLIGIAK 555
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 107 bits (256), Expect = 4e-22
Identities = 48/94 (51%), Positives = 65/94 (69%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
++ C++GG +R Q + GVEI+IATPGRL D +++G ++ TYL+LDEADRMLD
Sbjct: 208 IKAVCLYGGGDRRAQINVVRNGVEILIATPGRLNDLVQEGVVDVSTITYLILDEADRMLD 267
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
MGFEPQIRK++ +RPDRQT+ P R L
Sbjct: 268 MGFEPQIRKVLLDVRPDRQTVMTSATWPDGVRRL 301
Score = 65.7 bits (153), Expect = 1e-09
Identities = 36/67 (53%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGPHLM 265
+QTG+GKTLA++LPA++HI Q PI RG+ GP LVLAPTRELA QI++ A +
Sbjct: 150 AQTGTGKTLAFLLPALIHIEGQ-PIPRGERGGPNVLVLAPTRELALQIEKEVAKY--QFR 206
Query: 266 FVTRVCL 286
+ VCL
Sbjct: 207 GIKAVCL 213
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/80 (37%), Positives = 50/80 (62%)
Frame = +3
Query: 513 SATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQ 692
SATWP V++LA+ Y+ D IQ+ IG+L L+A H + Q++++ E +K ++N E +
Sbjct: 291 SATWPDGVRRLAQSYMHDPIQVYIGTLDLAATHTVTQVIEVMDEEDKFQRIN----EFVR 346
Query: 693 SQEPGAKTIIFVETKRKAEN 752
+P K IIF K +A++
Sbjct: 347 DMQPTDKVIIFCGKKTRADD 366
Score = 39.9 bits (89), Expect = 0.066
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ PTPIQAQ WPI + G++L+G+A+
Sbjct: 126 FTTPTPIQAQAWPILLRGEDLIGIAQ 151
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 106 bits (255), Expect = 5e-22
Identities = 51/94 (54%), Positives = 62/94 (65%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
++ CV+GG + Q DLERG EI+I TPGRL D + ++ TYLVLDEADRMLD
Sbjct: 385 MKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLD 444
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
MGFEPQIRK++ IRPDRQT+ P R L
Sbjct: 445 MGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRL 478
Score = 52.8 bits (121), Expect = 9e-06
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +3
Query: 513 SATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH-EKENKLNVLLQEIG 689
SATWP V++LA+ Y+ + IQ+ +GSL L+A H++ QI+ + ++ +K N + ++ +
Sbjct: 468 SATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNMS 527
Query: 690 QSQEPGAKTIIFVETKRKAEN 752
+ K IIF K +A++
Sbjct: 528 STD----KIIIFCGRKVRADD 544
Score = 50.8 bits (116), Expect = 4e-05
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQ--PPIRRGDGPIALVLAPTRELAQQIQ 232
+QTG+GKTLA++LP ++H Q P RG G LVLAPTRELA QI+
Sbjct: 327 AQTGTGKTLAFLLPGMIHTEYQSTPRGTRG-GANVLVLAPTRELALQIE 374
Score = 41.9 bits (94), Expect = 0.016
Identities = 13/31 (41%), Positives = 24/31 (77%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ MG+ +P+PIQ+Q WPI + G +++G+A+
Sbjct: 298 ITKMGFSKPSPIQSQAWPILLQGHDMIGIAQ 328
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 106 bits (255), Expect = 5e-22
Identities = 46/94 (48%), Positives = 68/94 (72%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+++ V+GG PK Q +L++G +I++ATPGRL+DFLE G NL +C Y+V+DEADR+LD
Sbjct: 230 IKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLDFLENGNINLLKCIYVVIDEADRLLD 289
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
MGFE Q+RKI+ Q+ ++Q L P++ R L
Sbjct: 290 MGFEKQLRKIMTQVNKNKQLLFLTATWPEQVRKL 323
Score = 53.2 bits (122), Expect = 7e-06
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +3
Query: 513 SATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
+ATWP++V+KLA D+ D ++I IG +L+AN NI Q V I + + KL L+E
Sbjct: 313 TATWPEQVRKLAYDFCAYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKLLDWLKENY 372
Query: 690 QSQEPGAKTIIFVETKRKAEN 752
++ K +IF +TKR +N
Sbjct: 373 ENN----KILIFCDTKRNCDN 389
Score = 39.5 bits (88), Expect = 0.087
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ EPT IQ WPIA+SGK+L+GVA+
Sbjct: 81 FSEPTAIQKITWPIALSGKDLIGVAE 106
Score = 33.1 bits (72), Expect = 7.6
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI 148
++TGSGKTLA++LP +HI
Sbjct: 105 AETGSGKTLAFVLPCFMHI 123
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 106 bits (254), Expect = 7e-22
Identities = 50/103 (48%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
Frame = +1
Query: 208 QRVSTTNSASCCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT 387
+ ++T C F +R C +GGA ++Q DL+RG EI++ TPGR+I+ L +
Sbjct: 637 RELATQIHKECKPFLKAMGLRAVCAYGGAIIKDQIADLKRGAEIIVCTPGRMIELLAANS 696
Query: 388 ---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 507
TNLQR TY+VLDEADRM DMGFEPQ+ K+ IRP+RQT+
Sbjct: 697 GRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFNNIRPNRQTI 739
Score = 64.1 bits (149), Expect = 4e-09
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
++TGSGKT+A++LP HI +Q P++ DGPI L++ PTRELA QI + F
Sbjct: 598 AKTGSGKTIAFLLPMFRHIRDQRPLKGSDGPIGLIMTPTRELATQIHKECKPF 650
Score = 37.9 bits (84), Expect = 0.27
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ +GY+ PT IQ Q P MSG++++GVAK
Sbjct: 569 ITKLGYERPTSIQMQAIPAIMSGRDVIGVAK 599
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 105 bits (253), Expect = 9e-22
Identities = 56/140 (40%), Positives = 82/140 (58%), Gaps = 4/140 (2%)
Frame = +1
Query: 139 CAHKQPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTTSYVRNTCVFGGAPKREQARD 318
C YS+ + C L + ++ + +F + +R+ V+GGA Q R+
Sbjct: 248 CQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIRE 307
Query: 319 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP-- 492
++ G +++ATPGRL+DF+EK +L+ C Y+VLDEADRMLDMGFEPQIRKIIE+
Sbjct: 308 VQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQIRKIIEESNMPS 367
Query: 493 --DRQTLSGQLLGPKK*RNL 546
+RQTL PK+ + L
Sbjct: 368 GINRQTLMFSATFPKEIQKL 387
Score = 49.6 bits (113), Expect = 8e-05
Identities = 33/87 (37%), Positives = 52/87 (59%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+PKE++KLA D+L +YI + +G + S + +I Q + + EK N
Sbjct: 371 RQT-LMFSATFPKEIQKLAADFLYNYIFMTVGRVG-STSDSIKQEIIYMTDVEKLN---- 424
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAEN 752
L+ I + P +IFVETK+ A++
Sbjct: 425 YLKNIFNTTAPNTLILIFVETKKGADS 451
Score = 45.2 bits (102), Expect = 0.002
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPH 259
+QTGSGKT A+++P I H+ NQ + P L+LAPTRELA QI + F
Sbjct: 228 AQTGSGKTAAFLIPIINHLVCQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFS-- 285
Query: 260 LMFVTRVCLV 289
L R C+V
Sbjct: 286 LNTPLRSCVV 295
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 105 bits (252), Expect = 1e-21
Identities = 49/80 (61%), Positives = 60/80 (75%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F S VR V+GGA +Q RDLERG +++ATPGRL+D +E+G L C YLVLD
Sbjct: 288 KFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLD 347
Query: 424 EADRMLDMGFEPQIRKIIEQ 483
EADRMLDMGFEPQIR+I+EQ
Sbjct: 348 EADRMLDMGFEPQIRRIVEQ 367
Score = 52.4 bits (120), Expect = 1e-05
Identities = 31/81 (38%), Positives = 51/81 (62%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
+SAT+PKE++ LA D+L +YI + +G + S + NI Q V +E +K + L LL G
Sbjct: 381 FSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEESDKRSFLLDLLNATG 439
Query: 690 QSQEPGAKTIIFVETKRKAEN 752
+ + T++FVETK+ A++
Sbjct: 440 KD----SLTLVFVETKKGADS 456
Score = 44.8 bits (101), Expect = 0.002
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 13/66 (19%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPP-------------IRRGDGPIALVLAPTRELAQQIQ 232
+QTGSGKT A++LP + I + P RR PI+LVLAPTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 233 QVAADF 250
+ A F
Sbjct: 284 EEARKF 289
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 105 bits (251), Expect = 2e-21
Identities = 55/134 (41%), Positives = 79/134 (58%)
Frame = +1
Query: 151 QPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTTSYVRNTCVFGGAPKREQARDLERG 330
QP + ER L + ++ A C ++ + +++ CV+GG ++EQ + + +G
Sbjct: 370 QPISREERNGPGMLVLTPTRELALQVEAECSKY-SYKGLKSVCVYGGGNRKEQIQHITKG 428
Query: 331 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLS 510
V+I+IATPGRL D NL+ TYLVLDEAD+MLD+GFE QI KI+ +RPDRQT+
Sbjct: 429 VDIIIATPGRLNDLQMNKCVNLRSITYLVLDEADKMLDLGFEGQITKILLDVRPDRQTVM 488
Query: 511 GQLLGPKK*RNLLR 552
P R L R
Sbjct: 489 TSATWPHTIRQLAR 502
Score = 56.4 bits (130), Expect = 7e-07
Identities = 25/48 (52%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQ 232
+QTG+GKTL+Y++P +H+++QP R +GP LVL PTRELA Q++
Sbjct: 349 AQTGTGKTLSYLIPGFIHLDSQPISREERNGPGMLVLTPTRELALQVE 396
Score = 52.8 bits (121), Expect = 9e-06
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +3
Query: 513 SATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQ 692
SATWP +++LA YL + + + +G+L L A H + Q + + E EK L+QE +
Sbjct: 490 SATWPHTIRQLARSYLKEPMIVYVGTLDLVAVHTVKQDIIVTTEEEK----RTLIQEFLR 545
Query: 693 SQEPGAKTIIFVETKRKAEN 752
+ P K IIFV K A++
Sbjct: 546 NLAPEDKAIIFVSRKLVADD 565
Score = 45.2 bits (102), Expect = 0.002
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K G++ PTPIQ+Q WPI + G +L+GVA+
Sbjct: 320 IKKAGFQRPTPIQSQAWPIVLQGMDLIGVAQ 350
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 105 bits (251), Expect = 2e-21
Identities = 55/107 (51%), Positives = 72/107 (67%), Gaps = 4/107 (3%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F + ++ TCVFGGAP EQ R+L RG++IVIATPGRLID L++ L +L+LD
Sbjct: 213 KFCKGTDLKTTCVFGGAPITEQIRNLSRGIDIVIATPGRLIDILKQHCITLSEVRFLILD 272
Query: 424 EADRMLDMGFEPQIRKIIE--QIRP--DRQTLSGQLLGPKK*RNLLR 552
EADRMLDMGFEPQ++++I + P DRQT+ P RNL R
Sbjct: 273 EADRMLDMGFEPQMQEVINGWDMPPADDRQTMLFSATFPDAVRNLAR 319
Score = 39.5 bits (88), Expect = 0.087
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
SQTGSGKT A++LP I + P + L PTRELA QI + F
Sbjct: 165 SQTGSGKTAAFMLPVITQLIG---TCHSPNPSCVALCPTRELAIQIFEETRKF 214
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 104 bits (250), Expect = 2e-21
Identities = 46/95 (48%), Positives = 68/95 (71%)
Frame = +1
Query: 262 YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 441
++R+ V+GG PK Q +L++G +IV+ATPGRL+D LE G +L RC Y+V+DEADR+L
Sbjct: 429 HIRSVAVYGGVPKYTQISNLKKGADIVVATPGRLLDLLESGVIHLLRCIYVVIDEADRLL 488
Query: 442 DMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
DMGFE Q++KI+ Q+ ++Q L P++ R L
Sbjct: 489 DMGFEKQLKKIMTQVNRNKQLLFFTATWPEQVRKL 523
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEI 686
++ATWP++V+KLA + D ++I IG +L+AN NI Q V I + + K LL +
Sbjct: 512 FTATWPEQVRKLAYQFSSFDPVKIQIGKSELTANKNIQQSVVISSSIDLKKK---LLDWL 568
Query: 687 GQSQEPGAKTIIFVETKRKAEN 752
Q+ E G K +IF +TKR ++
Sbjct: 569 KQNYE-GNKILIFCDTKRNCDS 589
Score = 41.9 bits (94), Expect = 0.016
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
+KEPT IQ WPIA+SGK+L+GVA+
Sbjct: 297 FKEPTAIQKVTWPIALSGKDLIGVAE 322
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDG 181
++TGSGKTLA+ LPA++HI Q R G
Sbjct: 321 AETGSGKTLAFALPALMHILKQREGERKSG 350
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 104 bits (249), Expect = 3e-21
Identities = 51/91 (56%), Positives = 64/91 (70%)
Frame = +1
Query: 274 TCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 453
+ + GG K Q ++L GV+I+IATPGRLI+ ++K TNLQRCTY+VLDEAD+M +GF
Sbjct: 293 SALLGGENKHHQWKELRAGVDIIIATPGRLIEMVKKKATNLQRCTYIVLDEADQMFSLGF 352
Query: 454 EPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
E QIR II QIRPD+Q L KK R L
Sbjct: 353 EYQIRSIIGQIRPDKQILLFTATMKKKIRQL 383
Score = 60.9 bits (141), Expect = 3e-08
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
++TGSGKT+AY+ P +VH++ Q + + +GPI LV+ PTREL QQ+
Sbjct: 232 AKTGSGKTIAYVWPMLVHVSAQRAVEKKEGPIGLVVVPTRELGQQV 277
Score = 35.9 bits (79), Expect = 1.1
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ +++PT IQ+Q P +SG+N++GVAK
Sbjct: 203 IVAQNFEKPTAIQSQALPCVLSGRNVIGVAK 233
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 103 bits (248), Expect = 4e-21
Identities = 49/94 (52%), Positives = 63/94 (67%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
++ C++GG +R Q ++ GVEI+IATPGRL D + ++ TYLVLDEADRMLD
Sbjct: 426 IKAICLYGGGDRRTQINKVKGGVEIIIATPGRLNDLVAANVIDITSITYLVLDEADRMLD 485
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
MGFEPQIRK++ IRPDRQT+ P R L
Sbjct: 486 MGFEPQIRKLLLDIRPDRQTIMTSATWPPGVRRL 519
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/51 (58%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQQ 235
+QTG+GKTLA++LPA +HI Q P+ RG+ GP LV+APTRELA QI++
Sbjct: 367 AQTGTGKTLAFLLPAFIHIEGQ-PVPRGEARGGPNVLVMAPTRELALQIEK 416
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/80 (32%), Positives = 48/80 (60%)
Frame = +3
Query: 513 SATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQ 692
SATWP V++LA+ Y+ + +Q+ +G+L L+A H + Q +++ E +K ++ + +G
Sbjct: 509 SATWPPGVRRLAQSYMSNPVQVYVGTLDLAATHTVTQQIEVIDEEDKYMRVMNFVTNMG- 567
Query: 693 SQEPGAKTIIFVETKRKAEN 752
P K IIF K +A++
Sbjct: 568 ---PSDKVIIFCGRKTRADD 584
Score = 44.4 bits (100), Expect = 0.003
Identities = 14/31 (45%), Positives = 25/31 (80%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K G+ +P+PIQAQ WP+ + G++L+G+A+
Sbjct: 338 IKKQGFAKPSPIQAQAWPVLLKGEDLIGIAQ 368
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 103 bits (248), Expect = 4e-21
Identities = 47/93 (50%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADR 435
+ + C FGG+ Q +L++G +I++ TPGR+ID L + TNLQR TYLVLDEADR
Sbjct: 419 ISSCCCFGGSSIESQIAELKKGAQIIVGTPGRIIDLLAANSGRVTNLQRVTYLVLDEADR 478
Query: 436 MLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK 534
M DMGFEPQ+ K+ ++RPDRQT+ P+K
Sbjct: 479 MFDMGFEPQVTKVFTRVRPDRQTVLFSATFPRK 511
Score = 74.5 bits (175), Expect = 3e-12
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
++TGSGKTL+++LP + HI +QPP+RRGDGPI L++ PTRELA QI + F L
Sbjct: 361 AKTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIMTPTRELALQIHKELNHFTKKLNIS 420
Query: 272 TRVC 283
+ C
Sbjct: 421 SCCC 424
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 15 MGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ Y P+ IQAQ P MSG++++GVAK
Sbjct: 335 LNYSSPSSIQAQAIPAIMSGRDIIGVAK 362
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 103 bits (247), Expect = 5e-21
Identities = 42/78 (53%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = +1
Query: 277 CVFGGAP-KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 453
C++GG P K++Q +++G+ +++ATPGRLI+ +++G NL + T L+LDEADRMLDMGF
Sbjct: 181 CIYGGNPNKKQQVELIQKGIHVIVATPGRLIELIDEGMVNLNKITMLILDEADRMLDMGF 240
Query: 454 EPQIRKIIEQIRPDRQTL 507
EPQ+R I+ IR DRQT+
Sbjct: 241 EPQVRDIVSTIREDRQTI 258
Score = 56.0 bits (129), Expect = 9e-07
Identities = 26/46 (56%), Positives = 31/46 (67%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
+QTGSGKTLAY+LPA+VH+ I P L+L PTREL QI
Sbjct: 103 AQTGSGKTLAYLLPALVHLEQHAMIMESPQPKLLILVPTRELGVQI 148
Score = 37.1 bits (82), Expect = 0.46
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +3
Query: 513 SATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQ 692
SATWP EV++L++++ D I + IG I Q + IC +KE KL+VL+ +
Sbjct: 261 SATWPNEVQQLSKEFCYDPILVKIGK-----GAPITQKI-IC-TGQKE-KLHVLMNVLDD 312
Query: 693 SQEPGAKTIIFVETKRKAEN 752
K +IF ETK++ E+
Sbjct: 313 LIYTD-KVLIFAETKKRCED 331
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 103 bits (247), Expect = 5e-21
Identities = 51/112 (45%), Positives = 71/112 (63%)
Frame = +1
Query: 148 KQPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTTSYVRNTCVFGGAPKREQARDLER 327
K + YS + + L + ++T +F S+VR V+GGAP Q R+++R
Sbjct: 227 KAQSFYSRKGYPSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDR 286
Query: 328 GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 483
G ++++ATPGRL D LE+G +L YLVLDEADRMLDMGFEPQIR I+E+
Sbjct: 287 GCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEE 338
Score = 48.8 bits (111), Expect = 1e-04
Identities = 33/86 (38%), Positives = 52/86 (60%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+P +++ LA D+L +YI +++G + S + NI Q + + +K++ L
Sbjct: 347 RQT-LMFSATFPVDIQHLARDFLDNYIFLSVGRVG-STSENITQRILYVDDMDKKSALLD 404
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
LL S E T+IFVETKR A+
Sbjct: 405 LL-----SAEHKGLTLIFVETKRMAD 425
Score = 37.9 bits (84), Expect = 0.27
Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPP----------IRRGDGPIALVLAPTRELAQQIQQVA 241
+QTGSGKT ++ P + P R P ALVLAPTRELA QI + A
Sbjct: 198 AQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEA 257
Query: 242 ADF 250
F
Sbjct: 258 RKF 260
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 103 bits (246), Expect = 6e-21
Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 3/106 (2%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYL 414
+F +T ++ C +GG+ Q +L+RGV +++ATPGRLID L T L+R T++
Sbjct: 483 KFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPGRLIDLLAANGGRITTLRRTTFV 542
Query: 415 VLDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
VLDEADRM DMGFEPQI+KI QIRPD+QT+ P+K L +
Sbjct: 543 VLDEADRMFDMGFEPQIQKIFTQIRPDKQTVLFSATFPRKLEQLAK 588
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/53 (54%), Positives = 40/53 (75%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
++TGSGKTL+Y+LP + HI +Q + G+GPI LVL+PTRELA QI++ F
Sbjct: 432 AKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLVLSPTRELALQIEKEILKF 484
Score = 39.1 bits (87), Expect = 0.12
Identities = 14/28 (50%), Positives = 23/28 (82%)
Frame = +3
Query: 15 MGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+G+ +P+PIQ Q PI +SG++++GVAK
Sbjct: 406 LGFAKPSPIQCQAIPIVLSGRDMIGVAK 433
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 102 bits (245), Expect = 8e-21
Identities = 53/119 (44%), Positives = 76/119 (63%), Gaps = 1/119 (0%)
Frame = +1
Query: 241 CRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 420
C ++ +++ C++GG + Q +DL +G +I+IATPGRL D L+ TYLVL
Sbjct: 335 CSEYSYRGLKSVCIYGGGDRDGQIKDLSKGADIIIATPGRLHDLQMNNFVYLKSITYLVL 394
Query: 421 DEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLRITWE-TTFRSI*DHY 594
DEAD+MLDMGFEPQI KI+ +RPDRQT+ L K + + +++ FRS+ DHY
Sbjct: 395 DEADKMLDMGFEPQIMKILLDVRPDRQTVMTS-LPVCKVEPVEQNSFDFRAFRSVADHY 452
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/54 (48%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADF 250
+QTG+GKTL+Y++P +HI++QP ++R +GP LVL PTRELA Q+ +++
Sbjct: 285 AQTGTGKTLSYLMPGFIHIDSQPVLQRARNGPGMLVLTPTRELALQVDAECSEY 338
Score = 42.7 bits (96), Expect = 0.009
Identities = 15/31 (48%), Positives = 25/31 (80%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ G+++PTPIQ+Q WPI + G +L+GVA+
Sbjct: 256 IEKAGFQKPTPIQSQAWPIILQGIDLIGVAQ 286
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 102 bits (245), Expect = 8e-21
Identities = 55/108 (50%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Frame = +1
Query: 241 CRFWTTSYVRNT-CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCT 408
CR++T+ N C GGA Q DL+RG EIV+ TPGR+ID L TNL+R T
Sbjct: 597 CRWFTSILNLNVVCCVGGAGIAGQLSDLKRGTEIVVCTPGRMIDVLTTSNGKITNLRRVT 656
Query: 409 YLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
Y+V+DEADRM D+GFEPQI KII+ IRPDRQ + PK L +
Sbjct: 657 YVVIDEADRMFDLGFEPQICKIIQNIRPDRQLVMFSATFPKNVEQLAK 704
Score = 71.7 bits (168), Expect = 2e-11
Identities = 30/52 (57%), Positives = 43/52 (82%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
++F ++TGSGKTLAY+LP + H+ +QP ++ GDGPIA+++APTRELA QI
Sbjct: 542 RDFIGIAETGSGKTLAYLLPLLRHVLDQPALKDGDGPIAIIMAPTRELAHQI 593
Score = 38.7 bits (86), Expect = 0.15
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
+SAT+PK V++LA+ L I+ +G + A NI QI++ E +K KL +L QE
Sbjct: 691 FSATFPKNVEQLAKRVLRKPIECIVGG-RGQAGGNIEQIIEFMDESDKLYKLLLLFQE-- 747
Query: 690 QSQEPGAKTIIFVETKRKAEN 752
+IFVE + +A++
Sbjct: 748 --WYTKGSILIFVEKQTEADD 766
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 102 bits (244), Expect = 1e-20
Identities = 52/107 (48%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Frame = +1
Query: 196 LGAYQRVSTTNSASCCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 375
+G + + T C R+ V+GG+ Q DL+RG EIV TPGR+ID L
Sbjct: 196 MGPTRELVTQIGKDCKRYGKAMGFSAVSVYGGSGIAAQIGDLKRGAEIVACTPGRMIDLL 255
Query: 376 EKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 507
G+ TNL+R TY+VLDEADRM DMGFEPQI +I+ +RPDRQT+
Sbjct: 256 TTGSGKITNLRRVTYMVLDEADRMFDMGFEPQITRILANLRPDRQTV 302
Score = 69.3 bits (162), Expect = 9e-11
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMF 268
++TGSGKTLAYILP + HIN Q P+ GDGPI +++ PTREL QI + +G + F
Sbjct: 161 AKTGSGKTLAYILPMLRHINAQEPLASGDGPIGMIMGPTRELVTQIGKDCKRYGKAMGF 219
Score = 40.7 bits (91), Expect = 0.038
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ G+++P PIQAQ P+ MSG++ +GVAK
Sbjct: 132 IRRSGFEKPMPIQAQALPVIMSGRDCIGVAK 162
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 102 bits (244), Expect = 1e-20
Identities = 48/80 (60%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
Frame = +1
Query: 277 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDM 447
C +GG EQ DL+RG EIV+ TPGR+ID L + TNL+R TYLVLDEADRM D
Sbjct: 410 CTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDK 469
Query: 448 GFEPQIRKIIEQIRPDRQTL 507
GFEPQI K++ IRPD+QT+
Sbjct: 470 GFEPQIMKVVNNIRPDKQTV 489
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
++TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F L
Sbjct: 348 AKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPL 404
Score = 42.3 bits (95), Expect = 0.012
Identities = 27/81 (33%), Positives = 48/81 (59%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
+SAT+P+ ++ LA L ++I +G + + +I Q IC EH+K K LL+ +G
Sbjct: 491 FSATFPRHMEALARKVLDKPVEILVGGKSVVCS-DITQNAVICAEHQKFLK---LLELLG 546
Query: 690 QSQEPGAKTIIFVETKRKAEN 752
E G+ +I+FV+ + KA++
Sbjct: 547 MYYEEGS-SIVFVDKQEKADD 566
Score = 36.7 bits (81), Expect = 0.61
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K Y +PT IQAQ P MSG++++G+AK
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVIGIAK 349
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 101 bits (243), Expect = 1e-20
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMG 450
V+GG+ +Q +L+RG EIV+ TPGR+ID L + TNL+R TYLV+DEADRM DMG
Sbjct: 503 VYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMG 562
Query: 451 FEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
FEPQI +I++ IRPDRQT+ P++ L R
Sbjct: 563 FEPQITRIVQNIRPDRQTVLFSATFPRQVETLAR 596
Score = 72.1 bits (169), Expect = 1e-11
Identities = 30/46 (65%), Positives = 38/46 (82%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
++TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI
Sbjct: 440 AKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQI 485
Score = 41.9 bits (94), Expect = 0.016
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K + Y++P PIQAQ PI MSG++ +GVAK
Sbjct: 411 LKKLNYEKPMPIQAQALPIIMSGRDCIGVAK 441
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 101 bits (242), Expect = 2e-20
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Frame = +1
Query: 259 SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL-EKGTTNLQRCTYLVLDEADR 435
S R +FGG KR+Q + L G EIV+ATPGRL+D L K +TNL+R TYL LDEADR
Sbjct: 157 SGARCCAIFGGVSKRDQFKKLRAGAEIVVATPGRLVDVLCMKNSTNLRRVTYLALDEADR 216
Query: 436 MLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
MLDMGFE +R I + +RPDRQ + P + L R
Sbjct: 217 MLDMGFEKIVRSICQAVRPDRQCVMFSATMPAAMQRLAR 255
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
++TGSGKTLA++LPA I+ Q P+ + +GPIALVLAPTRELA QI A F +
Sbjct: 99 AKTGSGKTLAFLLPAYAQISRQRPLTKREGPIALVLAPTRELASQIANEAHKFTKFGVSG 158
Query: 272 TRVCLV 289
R C +
Sbjct: 159 ARCCAI 164
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 101 bits (241), Expect = 3e-20
Identities = 51/98 (52%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = +1
Query: 259 SYVRNTCVFGGAPKREQARDLERG--VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 432
S VR CV+GGAPK EQ ++ G +++ATPGRL DF+E+G L R T LVLDEAD
Sbjct: 126 SGVRCVCVYGGAPKYEQKAQMKAGGGAAVIVATPGRLRDFMEEGVIKLDRVTMLVLDEAD 185
Query: 433 RMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
RMLD+GFEP+IR I R DRQT+ P+ ++L
Sbjct: 186 RMLDLGFEPEIRAIAGATRADRQTVMFSATWPQSVQSL 223
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = +2
Query: 98 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
TGSGKTLA+ +PA+ I++QPP + G PI LVLAPTRELAQQ +V D G
Sbjct: 73 TGSGKTLAFGMPALTQIHSQPPCKPGQ-PICLVLAPTRELAQQTAKVFDDAG 123
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/88 (35%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL-N 668
RQT +SATWP+ V+ LA +++ + I++ IG+ L A+ +I QIV++ + +K+ L
Sbjct: 207 RQTVM-FSATWPQSVQSLASEFMCNPIKVRIGAEGLKASQSITQIVEVVEPQDKDRHLAR 265
Query: 669 VLLQEIGQSQEPGAKTIIFVETKRKAEN 752
V+ Q +G+ +E +T+IF K++ N
Sbjct: 266 VMKQYLGKGKEV-PRTLIFGLYKKECAN 292
Score = 43.2 bits (97), Expect = 0.007
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +3
Query: 12 TMGYKEPTPIQAQGWPIAMSGKNLVGVA 95
T +K P+PIQAQ WPI MSG ++VG+A
Sbjct: 44 TAQFKTPSPIQAQSWPIIMSGHDMVGIA 71
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 101 bits (241), Expect = 3e-20
Identities = 45/74 (60%), Positives = 58/74 (78%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
V+ +GG P +Q R+LERGV+I++ATPGRL D LE+G +LQ +L LDEADRMLD
Sbjct: 253 VKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLD 312
Query: 445 MGFEPQIRKIIEQI 486
MGFEPQIRKI++Q+
Sbjct: 313 MGFEPQIRKIVQQM 326
Score = 53.2 bits (122), Expect = 7e-06
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+P+E+++LA D+L +YI + +G + S+ I+Q V+ + +K + L
Sbjct: 334 RQTML-FSATFPREIQRLASDFLSNYIFLAVGRVG-SSTDLIVQRVEFVHDSDKRSHLMD 391
Query: 672 LL--QEIGQSQEPGAKTIIFVETKRKAEN 752
LL Q +Q A T++FVETK+ A++
Sbjct: 392 LLHAQRENGNQGKQALTLVFVETKKGADS 420
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDG-----PIALVLAPTRELAQQIQQVAADF 250
+QTGSGKT A+ P I I I R G P+A++L+PTRELA QI A F
Sbjct: 190 AQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKF 247
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 100 bits (240), Expect = 3e-20
Identities = 44/68 (64%), Positives = 57/68 (83%)
Frame = +1
Query: 283 FGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 462
+GGAP +Q R+LERGV+I++ATPGRL+D +E+ +L+ YL LDEADRMLDMGFEPQ
Sbjct: 231 YGGAPISQQFRNLERGVDILVATPGRLVDMIERARVSLRMIKYLALDEADRMLDMGFEPQ 290
Query: 463 IRKIIEQI 486
IRKI+EQ+
Sbjct: 291 IRKIVEQM 298
Score = 43.2 bits (97), Expect = 0.007
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQVAADF 250
+QTGSGKT A+ P I I R G P AL+L+PTREL+ QI + A F
Sbjct: 164 AQTGSGKTAAFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEAKKF 219
Score = 35.5 bits (78), Expect = 1.4
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Frame = +3
Query: 510 WSATW--PKEVKK--LAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLL 677
+ A W P++VK+ L + +YI +++G + S+ I+Q V+ ++ +K L LL
Sbjct: 462 FGANWVFPEKVKEIGLLRIFYANYIFLSVGRVG-SSTDLIVQRVEFVEDTDKRYHLMDLL 520
Query: 678 QEIGQSQEPG--AKTIIFVETKR 740
Q ++ P A T++FVETKR
Sbjct: 521 QSQMTNRTPKKYALTLVFVETKR 543
Score = 32.7 bits (71), Expect = 10.0
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAKRWPTSCQP-LCT*TTNRL 164
++ Y +PTPIQ PIAM+G++L+ A+ K C P +C N+L
Sbjct: 135 IRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTGSGKT-AAFCFPIICGILRNQL 187
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 100 bits (240), Expect = 3e-20
Identities = 49/93 (52%), Positives = 59/93 (63%)
Frame = +1
Query: 268 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 447
++ C++GG + Q L EIV ATPGRLIDFL+ G N R +LVLDEADRMLDM
Sbjct: 188 KHVCIYGGEDRHRQINKLRFHPEIVTATPGRLIDFLQSGVFNPNRANFLVLDEADRMLDM 247
Query: 448 GFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
GFEPQIR II + DR+T PK+ R L
Sbjct: 248 GFEPQIRAIIASLTKDRETFMFSATWPKEIRQL 280
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/53 (56%), Positives = 41/53 (77%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
++TGSGKT ++++PA++HI+ Q I DGPI LVL+PTRELA Q +VAA F
Sbjct: 129 AKTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVAAQF 181
Score = 66.9 bits (156), Expect = 5e-10
Identities = 38/86 (44%), Positives = 56/86 (65%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
R+T F +SATWPKE+++LA D+L + I +++G +L+ N I Q V + QEHEK K
Sbjct: 264 RET-FMFSATWPKEIRQLASDFLSNPIHMHVGGEELATNERIQQNVLLLQEHEKGEKCVE 322
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
+L+E QS+ K IIF +TKR +
Sbjct: 323 ILKE-NQSK----KIIIFAKTKRTVQ 343
Score = 33.9 bits (74), Expect = 4.3
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K + PTPIQ+ PI + G ++VG+AK
Sbjct: 100 IKENNWTNPTPIQSLSIPIGLKGNDMVGIAK 130
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 99 bits (238), Expect = 6e-20
Identities = 50/99 (50%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADR 435
+R V+GG+ +Q +L+RG EIV+ TPGR+ID L + TNL+R T+LV+DEADR
Sbjct: 631 IRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADR 690
Query: 436 MLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
M DMGFEPQI +II+ IRP+RQT+ P++ L R
Sbjct: 691 MFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLAR 729
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
++TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI F L
Sbjct: 573 AKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPL 629
Score = 40.3 bits (90), Expect = 0.050
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K + Y++P PIQ Q PI MSG++ +GVAK
Sbjct: 544 MKKLNYEKPMPIQTQALPIIMSGRDCIGVAK 574
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 99.1 bits (236), Expect = 1e-19
Identities = 43/78 (55%), Positives = 59/78 (75%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F +++ VR V+GG QAR+LE+G +V+ TPGRL+DF+ KG NL + YL+LD
Sbjct: 371 KFASSTCVRPVVVYGGTSVGYQARELEKGAHVVVGTPGRLLDFIGKGKINLSKVKYLILD 430
Query: 424 EADRMLDMGFEPQIRKII 477
EADRMLDMGFEP+IRK++
Sbjct: 431 EADRMLDMGFEPEIRKLV 448
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/86 (34%), Positives = 53/86 (61%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+ E+++LA+++L +Y+ + +G + AN +I Q V ++EK KL
Sbjct: 459 RQT-LMFSATFAAEIQQLAKEFLSEYVFVTVGRVG-GANSDITQEVHQVTKYEKREKLVE 516
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
+L + G +T++F+ETKR A+
Sbjct: 517 ILNQAGTD-----RTLVFLETKRSAD 537
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDG------PIALVLAPTRELAQQIQQ 235
K+ +QTGSGKT A++LP + I I G G P A+++ PTREL QI
Sbjct: 308 KDLMGCAQTGSGKTAAFLLPVLTGIIKNDLIEGGSGFGGPQYPAAIIVGPTRELVNQIYL 367
Query: 236 VAADF 250
A F
Sbjct: 368 EARKF 372
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
V+ Y PTPIQ PI +SGK+L+G A+
Sbjct: 285 VRKAKYDRPTPIQKWAIPIVLSGKDLMGCAQ 315
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 98.3 bits (234), Expect = 2e-19
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Frame = +1
Query: 277 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEADRMLDM 447
C +GG+P ++Q L++G I++ TPGR+ID L +L R T+LV+DEADRM DM
Sbjct: 492 CAYGGSPIKDQIAALKKGTHIIVCTPGRMIDLLAANQGRVLSLSRVTFLVIDEADRMFDM 551
Query: 448 GFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
GFEPQ+ K+ + IRPDRQT+ PKK L R
Sbjct: 552 GFEPQVLKLTQSIRPDRQTVLFSATFPKKMEQLAR 586
Score = 40.7 bits (91), Expect = 0.038
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIR--------RGDGPIALVLAPTRELAQQIQQVAAD 247
++TGSGKTLA++LP + HI ++ + P+ +++ PTREL QI + D
Sbjct: 422 AKTGSGKTLAFLLPMLRHIKHRVGVETHTTTLSGASSHPLGVIITPTRELCVQIYR---D 478
Query: 248 FGPHL--MFVTRVC 283
P L + +T VC
Sbjct: 479 LRPFLAALELTAVC 492
Score = 33.9 bits (74), Expect = 4.3
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
Y +PT IQAQ P MSG++++ VAK
Sbjct: 398 YDKPTSIQAQAIPAVMSGRDVISVAK 423
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 97.9 bits (233), Expect = 2e-19
Identities = 51/83 (61%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL--EKG-TTNLQRCTYLVLDEADR 435
++ ++GGA EQ L+RG EIVI TPGRLID L KG TNL+R T+LVLDEADR
Sbjct: 470 LKTLAIYGGAGIGEQLNALKRGAEIVIGTPGRLIDVLTLSKGKVTNLRRVTFLVLDEADR 529
Query: 436 MLDMGFEPQIRKIIEQIRPDRQT 504
M DMGF PQI I+ IRPDRQT
Sbjct: 530 MFDMGFAPQISAIVGNIRPDRQT 552
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
++TGSGKTLA++LPAI H +QP +R DG I LV+APTREL QI ++ F
Sbjct: 412 AETGSGKTLAFLLPAIRHALDQPSLRENDGMIVLVIAPTRELVIQISNESSKF 464
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 97.5 bits (232), Expect = 3e-19
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
++GGAP+R Q L R +IV+ TPGR+IDF+E G +L+ ++LV+DEADR+++MGFE
Sbjct: 246 IYGGAPRRSQQLQLSRRPKIVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQ 305
Query: 460 QIRKIIEQIRPDRQTLSGQLLGPKK 534
QI I IRPDRQ L PKK
Sbjct: 306 QIDGIFNSIRPDRQVLYWSATWPKK 330
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
S+TGSGKTL++ILPAI HI QP GP LV+APTRELA QI Q A +
Sbjct: 183 SKTGSGKTLSFILPAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQY 235
Score = 59.7 bits (138), Expect = 8e-08
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
WSATWPK+V AE ++ I++ IGS QL+AN NI Q I +K++ L+ +G
Sbjct: 323 WSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIVP--TDADKVDALMDTLG 380
Query: 690 Q--SQEPGAKTIIFVETKRKAE 749
+ S + A+T+IF TK+ A+
Sbjct: 381 EIYSADEKAQTLIFTMTKKGAD 402
Score = 41.9 bits (94), Expect = 0.016
Identities = 13/26 (50%), Positives = 24/26 (92%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
+++PTP+Q+ GWPIA+SG +++G++K
Sbjct: 159 FEKPTPVQSLGWPIALSGSDMLGISK 184
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 97.5 bits (232), Expect = 3e-19
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL--EKG-TTNLQRCTYLVLDEADR 435
+R V+GG+P EQ L+RGVEIV TPGRLI+ L G TNL+R T++V+DEADR
Sbjct: 490 IRTKAVYGGSPIGEQLNALKRGVEIVCGTPGRLIEVLTISNGKVTNLRRVTFVVIDEADR 549
Query: 436 MLDMGFEPQIRKIIEQIRPDRQT 504
M D+GF PQI I++ IRPDRQT
Sbjct: 550 MFDLGFSPQISAIVDNIRPDRQT 572
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
++TGSGKT+AY+LPAI H+ QP +R +G I L++APTRELA QI
Sbjct: 432 AETGSGKTMAYLLPAIRHVLYQPKLRENEGMIVLIIAPTRELASQI 477
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 97.5 bits (232), Expect = 3e-19
Identities = 47/96 (48%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QRCTYLVLDEADR 435
+R C GG+ ++Q DL+RGVEIV+ATPGRLID L + L +R T++V+DEADR
Sbjct: 381 IRTICCTGGSEMKKQINDLKRGVEIVVATPGRLIDILTLNSGKLISTKRITFVVMDEADR 440
Query: 436 MLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RN 543
+ DMGFEPQI +I++ +RPD+Q + P K R+
Sbjct: 441 LFDMGFEPQITQIMKTVRPDKQCVLFSATFPNKLRS 476
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGPHLMF 268
S+TGSGKT++YILP + I Q + + + GP+ L+LAPTRELA QI + F
Sbjct: 321 SKTGSGKTISYILPMLRQIKAQRTLSKNETGPLGLILAPTRELALQINEEVEKFTKQDRS 380
Query: 269 VTRVC 283
+ +C
Sbjct: 381 IRTIC 385
Score = 37.5 bits (83), Expect = 0.35
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 9 KTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
K + Y EPT IQ+Q P MSG++L+G++K
Sbjct: 293 KELKYDEPTAIQSQAIPAIMSGRDLIGISK 322
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 97.1 bits (231), Expect = 4e-19
Identities = 47/79 (59%), Positives = 58/79 (73%), Gaps = 3/79 (3%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEADRMLDMG 450
V+GG+ Q +L+RG EIV TPGR+ID L G TNL+R TY+VLDEADRM DMG
Sbjct: 437 VYGGSGIAAQIGELKRGAEIVACTPGRMIDILTTGGGKITNLRRVTYIVLDEADRMFDMG 496
Query: 451 FEPQIRKIIEQIRPDRQTL 507
FEPQI +I+ +RPDRQT+
Sbjct: 497 FEPQITRILANLRPDRQTV 515
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/59 (55%), Positives = 43/59 (72%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMF 268
++TGSGKTLAYILP + HIN Q P++ GDGPI +++ PTREL QI + A +G L F
Sbjct: 374 AKTGSGKTLAYILPMLRHINAQEPLKNGDGPIGMIMGPTRELVTQIGKEAKRYGKALGF 432
Score = 40.3 bits (90), Expect = 0.050
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ G+++P PIQAQ P+ MSG++ +G+AK
Sbjct: 345 IRRCGFEKPMPIQAQALPVIMSGRDCIGIAK 375
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 96.7 bits (230), Expect = 5e-19
Identities = 50/94 (53%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMG 450
VFGG + Q +L+RG EIV+ATPGRLID L TNL+R T +V+DEADRM D+G
Sbjct: 814 VFGGTGIKGQLSELKRGCEIVVATPGRLIDVLTTSNGKITNLKRITMVVIDEADRMFDLG 873
Query: 451 FEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
FEPQI KI+ RPD+QT+ PK NL +
Sbjct: 874 FEPQIAKILATTRPDKQTVLFSATFPKNVENLAK 907
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
++TGSGKTLAY+LP I H++ Q P++ GDGPI L+L PTRELA QI A F
Sbjct: 751 AETGSGKTLAYLLPMIRHVSAQRPLQEGDGPIGLILVPTRELATQIYLEAKPF 803
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 96.7 bits (230), Expect = 5e-19
Identities = 45/81 (55%), Positives = 58/81 (71%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
++N V GG +Q +L GVEI +ATPGR ID L++G T+L R +Y+VLDEADRMLD
Sbjct: 221 LKNCIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLD 280
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGFEPQIR+I+ + QTL
Sbjct: 281 MGFEPQIREIMRSLPEKHQTL 301
Score = 77.0 bits (181), Expect = 5e-13
Identities = 38/67 (56%), Positives = 49/67 (73%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
++TGSGKT A+ +P + H QPPIRRGDGP+ALVLAPTRELAQQI++ F L +
Sbjct: 162 AETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESL 221
Query: 272 TRVCLVV 292
+ C+VV
Sbjct: 222 -KNCIVV 227
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/84 (30%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ-IVDICQEHEKENKLNVLLQEI 686
+SAT P E++ LA++YL + +Q+ +G + S N+ Q +V + + + L++L++E
Sbjct: 303 FSATMPVEIEALAKEYLANPVQVKVGKVS-SPTTNVSQTLVKVSGSEKIDRLLDLLVEEA 361
Query: 687 GQSQEPGAK---TIIFVETKRKAE 749
Q+++ G + TI+FVE K + +
Sbjct: 362 SQAEKCGHRFPLTIVFVERKTRCD 385
Score = 34.3 bits (75), Expect = 3.3
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
Y P+ IQAQ PIA+SG++L+G A+
Sbjct: 138 YTRPSSIQAQAMPIALSGRDLLGCAE 163
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 96.7 bits (230), Expect = 5e-19
Identities = 43/89 (48%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLER-GVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 420
+F + C +GG K EQ+ +L+ G E+V+ TPGR+ID ++ G TN R T+LV
Sbjct: 360 KFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVF 419
Query: 421 DEADRMLDMGFEPQIRKIIEQIRPDRQTL 507
DEADRM DMGFE Q++ I + +RPDRQ L
Sbjct: 420 DEADRMFDMGFEAQVKSISDHVRPDRQCL 448
Score = 69.7 bits (163), Expect = 7e-11
Identities = 30/53 (56%), Positives = 42/53 (79%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
++TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F
Sbjct: 309 AKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKF 361
Score = 38.7 bits (86), Expect = 0.15
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK----RVPAKRWP 122
++ Y++PTPIQA P A+SG++++G+AK + A WP
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322
>UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017541 - Anopheles gambiae
str. PEST
Length = 771
Score = 96.7 bits (230), Expect = 5e-19
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F S +R ++GG ++Q RDLERG +++ATPGRL D + +G L +LVLD
Sbjct: 405 KFCYRSRMRPAVLYGGNNTQDQMRDLERGCHLIVATPGRLEDMIGRGKVGLDNIRFLVLD 464
Query: 424 EADRMLDMGFEPQIRKIIEQIR----PDRQTLSGQLLGPK 531
EADRMLDMGFEPQIR+I+E+ R +RQTL PK
Sbjct: 465 EADRMLDMGFEPQIRRIVEESRMPVTGERQTLMFSATFPK 504
Score = 49.2 bits (112), Expect = 1e-04
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+PK +++LA D+L YI + +G + S + NI Q + +E+ K + L
Sbjct: 493 RQT-LMFSATFPKAIQELASDFLYRYIFLAVGRVG-STSVNITQTIFWVEENIKRSHLLD 550
Query: 672 LLQEI---GQSQEPGAKTIIFVETKRKAEN 752
LL I + T+IFVETK+ A++
Sbjct: 551 LLSNITKQNDGDDENCLTLIFVETKKAADS 580
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 95.9 bits (228), Expect = 9e-19
Identities = 49/105 (46%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F S +R ++GG EQ R+L+RG +++ATPGRL D + +G L+ +LVLD
Sbjct: 400 KFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLD 459
Query: 424 EADRMLDMGFEPQIRKIIEQIR----PDRQTLSGQLLGPKK*RNL 546
EADRMLDMGFEPQIR+I+EQ+ RQTL PK+ + L
Sbjct: 460 EADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQEL 504
Score = 53.6 bits (123), Expect = 5e-06
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+PK++++LA D+L +YI + +G + S + NI Q + E +K + L
Sbjct: 488 RQT-LMFSATFPKQIQELASDFLSNYIFLAVGRVG-STSENITQTILWVYEPDKRSYLLD 545
Query: 672 LLQEI--GQSQEPGAKTIIFVETKRKAEN 752
LL I G + T+IFVETK+ A++
Sbjct: 546 LLSSIRDGPEYTKDSLTLIFVETKKGADS 574
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAI---VHINNQPP-------IRRGDGPIALVLAPTRELAQQIQQVA 241
+QTGSGKT A+++P + + + PP RR P+ LVLAPTRELA QI + A
Sbjct: 339 AQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEA 398
Query: 242 ADF 250
F
Sbjct: 399 KKF 401
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 95.5 bits (227), Expect = 1e-18
Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADR 435
+R+ VFGG Q L+RG EIV+ TPGR+ID L TNL+R T++VLDEADR
Sbjct: 242 IRSVAVFGGTGISNQIGALKRGTEIVVCTPGRMIDILVTNNGRITNLRRVTFVVLDEADR 301
Query: 436 MLDMGFEPQIRKIIEQIRPDRQ 501
M DMGF PQI++IIE IRPD+Q
Sbjct: 302 MFDMGFGPQIKRIIEGIRPDKQ 323
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/57 (52%), Positives = 40/57 (70%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
++TGSGKTLAY +P I H+ Q P+ +G+GPI +V AP RELA+QI FG +L
Sbjct: 184 AKTGSGKTLAYTIPLIKHVMAQRPLSKGEGPIGIVFAPIRELAEQINTEINKFGKYL 240
Score = 32.7 bits (71), Expect = 10.0
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K + Y++P+P+Q Q P+ MSG + + AK
Sbjct: 155 IKALKYEKPSPVQRQAIPVIMSGYDAIVCAK 185
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 94.7 bits (225), Expect = 2e-18
Identities = 49/90 (54%), Positives = 59/90 (65%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R C +GG K +Q+R L GV+IVI TPGRL D L K +L YLVLDEADRMLD
Sbjct: 213 IRQLCAYGGLGKIDQSRILRNGVDIVIGTPGRLNDLLRKH--HLSSVQYLVLDEADRMLD 270
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK 534
MGF PQI +I+QI +RQTL PK+
Sbjct: 271 MGFMPQIESLIDQIPKERQTLMFSATWPKE 300
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/48 (58%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +2
Query: 98 TGSGKTLAYILPAIVHINNQPPIRR-GDGPIALVLAPTRELAQQIQQV 238
TGSGKTLA++LPA++ I + P G P+ LV+APTRELAQQI++V
Sbjct: 156 TGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQIEEV 203
Score = 50.8 bits (116), Expect = 4e-05
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ-IVDICQEHEKENKLN 668
RQT +SATWPKEVK LA +L D I+I +GS +L+ + N+ Q IV+I + ++ +
Sbjct: 288 RQT-LMFSATWPKEVKLLASKFLKDPIKITVGSQELTGSINVTQHIVNIDDLSDLQSD-D 345
Query: 669 VLLQEIGQ--SQEPGAKTIIFVETKRKAEN 752
++ EI + + +P I+F K K ++
Sbjct: 346 LIYDEINKILTADPTNTVIVFCNEKYKCDD 375
Score = 36.3 bits (80), Expect = 0.81
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVA 95
G+ PT IQ Q WPI + G +LVG+A
Sbjct: 129 GFTAPTVIQGQSWPIILGGNDLVGLA 154
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 94.7 bits (225), Expect = 2e-18
Identities = 43/88 (48%), Positives = 63/88 (71%)
Frame = +1
Query: 283 FGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 462
+GG + +QA+ ++R +I++A PGRL DFL++G +L + TYLV+DEADR+LDMGFE
Sbjct: 212 YGGQNRDQQAQQIKRNPDILVACPGRLKDFLQEGILDLSKVTYLVIDEADRLLDMGFEDD 271
Query: 463 IRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
+R I+++ R DRQT+ PK RNL
Sbjct: 272 VRFIVQRTRQDRQTVFFSATWPKAVRNL 299
Score = 48.0 bits (109), Expect = 2e-04
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQ---PPIR-RGDGPIALVLAPTRELAQQI-QQVAADFGP 256
++TGSGKT Y+LP ++ I Q R R +GP L+LAPTREL QI QQV+ P
Sbjct: 144 AETGSGKTFGYLLPGLIQIKCQNYGSNFRNRINGPEILILAPTRELVMQIAQQVSLFMKP 203
Query: 257 HLMFV 271
+ + V
Sbjct: 204 NNLTV 208
Score = 46.4 bits (105), Expect = 8e-04
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEHEKENKLN 668
RQT F +SATWPK V+ L+ D+ D I + +G L+ N NI Q + IC + + KL
Sbjct: 283 RQTVF-FSATWPKAVRNLSLDFCAEDPIYVQVGRSNLTVNKNIDQEI-ICLYNNQ--KLQ 338
Query: 669 VLLQEIGQSQEPGAKTIIFVETKRKAE 749
LL + Q + K +IF ET+ E
Sbjct: 339 TLLDILDQ-LKINDKVLIFAETRISCE 364
Score = 33.1 bits (72), Expect = 7.6
Identities = 12/28 (42%), Positives = 22/28 (78%)
Frame = +3
Query: 15 MGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ ++ PTPIQ+ +P+ +SG +L+GVA+
Sbjct: 118 LNFRAPTPIQSVVFPLILSGYDLIGVAE 145
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 94.3 bits (224), Expect = 3e-18
Identities = 47/86 (54%), Positives = 57/86 (66%)
Frame = +1
Query: 277 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 456
C+ GG P EQA+D+ G+ IV+ATPGRL D L K NL+ C YLVLDEADRMLDMGFE
Sbjct: 306 CI-GGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFE 364
Query: 457 PQIRKIIEQIRPDRQTLSGQLLGPKK 534
+I+ I + RQTL P+K
Sbjct: 365 DEIKSIFYFFKAQRQTLLFSATMPRK 390
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQI 229
+ TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI
Sbjct: 234 ASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 9 KTMGYKEPTPIQAQGWPIAMSGKNLVGVA 95
K G PT IQ QG P+A+SG++++G+A
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGIA 234
Score = 33.9 bits (74), Expect = 4.3
Identities = 28/87 (32%), Positives = 48/87 (55%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT P++++ A+ L I +N+G +A+ N+LQ ++ + ENKL
Sbjct: 378 RQT-LLFSATMPRKIQFFAKSALVKPIVVNVGRAG-AASLNVLQELEFVR---SENKLVR 432
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAEN 752
+L+ + Q+ K +IF E K +N
Sbjct: 433 VLECL---QKTSPKVLIFAEKKVDVDN 456
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 94.3 bits (224), Expect = 3e-18
Identities = 46/94 (48%), Positives = 61/94 (64%)
Frame = +1
Query: 271 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 450
N C+ GG+ +EQ+ ++RGV +V+ATPGRL+D L+K L C YLVLDEADRM+DMG
Sbjct: 161 NLCI-GGSSIKEQSDAMKRGVHMVVATPGRLMDLLDKRIITLDVCRYLVLDEADRMIDMG 219
Query: 451 FEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
FE +R I + RQTL PKK +N +
Sbjct: 220 FEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAK 253
Score = 46.8 bits (106), Expect = 6e-04
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = +2
Query: 98 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF 250
TGSGKTL + LP I+ Q P +R +GP +++ P+RELA+Q +V F
Sbjct: 93 TGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIVVPSRELARQTFEVITHF 146
Score = 36.7 bits (81), Expect = 0.61
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 95
+K G PTPIQ QG P ++G++++G+A
Sbjct: 62 LKKKGITHPTPIQVQGLPAVLTGRDMIGIA 91
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 94.3 bits (224), Expect = 3e-18
Identities = 47/103 (45%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Frame = +1
Query: 244 RFWTTSY-VRNTCVFGGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 417
+ +T +Y ++ C++GG R+ Q +L R I++ATPGRL+DFL +G T L +YLV
Sbjct: 193 QLFTQNYRLKTLCIYGGINNRKNQFYNLGRFPNILVATPGRLLDFLREGATTLANVSYLV 252
Query: 418 LDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
+DEADR+L++GFE IR+I++QIR DRQT+ PK ++L
Sbjct: 253 IDEADRLLELGFEDTIREIVQQIRFDRQTVFFSATWPKAVKDL 295
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 5/52 (9%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPP-----IRRGDGPIALVLAPTRELAQQIQ 232
+QTGSGKT+AY+LP ++ I +Q ++ +GP L+L PTRELA QI+
Sbjct: 138 AQTGSGKTIAYLLPGLIQITSQKTEELNNTKKQNGPQMLILVPTRELAMQIE 189
Score = 45.6 bits (103), Expect = 0.001
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEHEKENKLN 668
RQT F +SATWPK VK LA D+ I + IG L+ N NI Q + + +K KL
Sbjct: 279 RQTVF-FSATWPKAVKDLAFDFCQYSPIYVQIGKSNLTINKNIDQEIICLFQKDKLQKLL 337
Query: 669 VLLQEIGQSQEPGAKTIIFVETKRKAE 749
+L + S K +IF E K++ E
Sbjct: 338 DILDTLKISD----KVLIFSEQKQRCE 360
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 93.9 bits (223), Expect = 4e-18
Identities = 44/77 (57%), Positives = 54/77 (70%)
Frame = +1
Query: 268 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 447
++ C++GG + EQ GVEIVIATPGRL D G +L TY+VLDEADRMLDM
Sbjct: 192 KSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDM 251
Query: 448 GFEPQIRKIIEQIRPDR 498
GFE IR+I+ +IRPDR
Sbjct: 252 GFEVAIRRILFEIRPDR 268
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 6/53 (11%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQ 232
SQTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIE 180
Score = 39.9 bits (89), Expect = 0.066
Identities = 21/80 (26%), Positives = 42/80 (52%)
Frame = +3
Query: 513 SATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQ 692
SATWP+ V+KL + Y + + GSL L++ ++ Q + + ++ ++ +
Sbjct: 274 SATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFEFVPHDSRFLRVCEIVNFLTA 333
Query: 693 SQEPGAKTIIFVETKRKAEN 752
+ K IIFV++K A++
Sbjct: 334 AHGQNYKMIIFVKSKVMADH 353
Score = 39.1 bits (87), Expect = 0.12
Identities = 12/31 (38%), Positives = 26/31 (83%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ G+++P+PIQ+Q WP+ +SG++ +GV++
Sbjct: 99 IRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQ 129
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 93.9 bits (223), Expect = 4e-18
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
++ V GGA + +Q L GVE+VIATPGRL+D LE L +CTY++LDEADRMLD
Sbjct: 407 IKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLD 466
Query: 445 MGFEPQIRKIIEQIRPD 495
MGFEP ++K++E + PD
Sbjct: 467 MGFEPDVQKVLEYM-PD 482
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFG 253
++TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 345 AETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFG 402
Score = 39.9 bits (89), Expect = 0.066
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
VK +GY EPTPIQ Q PI + ++++GVA+
Sbjct: 316 VKEIGYLEPTPIQRQAIPIGLQNRDVIGVAE 346
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 93.9 bits (223), Expect = 4e-18
Identities = 47/108 (43%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Frame = +1
Query: 238 CCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCT 408
C F +R +C GG+ E +++G E+VI TPGR+ID L TN++R T
Sbjct: 496 CQPFLKVLNIRASCCVGGSSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRVTNVRRTT 555
Query: 409 YLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
Y+V+DEADRM DMGFEPQ+ KII +RP Q + PK +L R
Sbjct: 556 YIVMDEADRMFDMGFEPQVMKIINNVRPSAQKVLFSATFPKTMESLAR 603
Score = 62.9 bits (146), Expect = 8e-09
Identities = 26/53 (49%), Positives = 40/53 (75%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
++TGSGKT+A++LP + H+ +Q P+ +GPIA+V++PTRELA QI + F
Sbjct: 447 AKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKECQPF 499
Score = 38.3 bits (85), Expect = 0.20
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K G++ PT IQAQ P MSG++++G+AK
Sbjct: 418 IKHQGWETPTSIQAQAIPAIMSGRDVIGIAK 448
Score = 36.3 bits (80), Expect = 0.81
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
+SAT+PK ++ LA L ++I +G + A I Q V++ K +L +L E+G
Sbjct: 590 FSATFPKTMESLARRILVKPLEITVGGRSVVA-PEIDQRVEVRDGDTKFTRLLEILGEMG 648
Query: 690 Q--SQEPGAKTIIFVETKRKAEN 752
+ E +T+IFV+ + A++
Sbjct: 649 EEHKDEDDFRTLIFVDRQESADD 671
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 93.5 bits (222), Expect = 5e-18
Identities = 44/93 (47%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QRCTYLVLDEADR 435
+R+ C GG+ + Q D++RGVEIVIATPGR ID L + NL +R ++V+DEADR
Sbjct: 341 IRSLCCTGGSELKRQINDIKRGVEIVIATPGRFIDLLSLNSGNLINPKRIVFVVMDEADR 400
Query: 436 MLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK 534
+ D+GFEPQ+ +I++ IRPD+Q + P K
Sbjct: 401 LFDLGFEPQVNQIMKCIRPDKQCVLFSATFPNK 433
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF 250
S+TGSGKT+++ILP + I Q P+ + GP+ L+L+PTRELA QI + F
Sbjct: 281 SKTGSGKTVSFILPLLRQIKAQRPLGGDETGPLGLILSPTRELALQIHEEVTKF 334
Score = 39.1 bits (87), Expect = 0.12
Identities = 25/77 (32%), Positives = 39/77 (50%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
+SAT+P ++K A L D + I + S L N NI Q V+I E + K + +
Sbjct: 426 FSATFPNKLKSFASKILHDPVYITVNSKSL-INENIEQKVEIFSNEEDKFKSLIHWLALT 484
Query: 690 QSQEPGAKTIIFVETKR 740
Q KTI+FV +++
Sbjct: 485 QQNLNDEKTIVFVSSQQ 501
Score = 35.1 bits (77), Expect = 1.9
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +3
Query: 9 KTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ + + PTPIQAQ P MSG++++G++K
Sbjct: 253 RELEFTVPTPIQAQAIPAIMSGRDVIGISK 282
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 93.1 bits (221), Expect = 7e-18
Identities = 40/90 (44%), Positives = 60/90 (66%)
Frame = +1
Query: 238 CCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 417
C + ++ ++ C+ GG Q R ++ G ++IATPGR ID L N+++ +YLV
Sbjct: 193 CQKIFSLMDKKSACLVGGNDIENQLRAIKNGSNVIIATPGRFIDLLSSSAFNIKKVSYLV 252
Query: 418 LDEADRMLDMGFEPQIRKIIEQIRPDRQTL 507
+DEADRM D+GFEPQ+ +I E++R DRQTL
Sbjct: 253 IDEADRMFDLGFEPQVIRIAERMRKDRQTL 282
Score = 50.4 bits (115), Expect = 5e-05
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +2
Query: 98 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 226
TGSGKTLA+I+P ++H+ QPP + + A++L+PTRELA Q
Sbjct: 147 TGSGKTLAFIIPCLLHVLAQPPTGQYEA-AAVILSPTRELAYQ 188
Score = 33.5 bits (73), Expect = 5.7
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 95
++ G+K+PT IQ Q P +SG++++G A
Sbjct: 116 LRLRGFKQPTSIQCQAIPCILSGRDIIGCA 145
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 93.1 bits (221), Expect = 7e-18
Identities = 44/79 (55%), Positives = 53/79 (67%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R V GG + +Q L G EIVIATPGRLID LE L RCTY+VLDEADRM+D
Sbjct: 497 IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMID 556
Query: 445 MGFEPQIRKIIEQIRPDRQ 501
MGFEP ++KI+E + Q
Sbjct: 557 MGFEPDVQKILEHMPVSNQ 575
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRR----GDGPIALVLAPTRELAQQIQQVAADFGPH 259
++TGSGKT A+++P +V I P I R GP A++LAPTRELAQQI++ FG
Sbjct: 435 AETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKP 494
Query: 260 L 262
L
Sbjct: 495 L 495
Score = 39.5 bits (88), Expect = 0.087
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVAK 98
GYKEPTPIQ Q PI + ++++GVA+
Sbjct: 410 GYKEPTPIQRQAIPIGLQNRDIIGVAE 436
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 92.7 bits (220), Expect = 9e-18
Identities = 46/86 (53%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 420
+F S ++ ++GG R+Q L G I+IATPGRLID +E+G L C YLVL
Sbjct: 244 KFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVL 303
Query: 421 DEADRMLDMGFEPQIRKIIEQIRPDR 498
DEADRMLDMGFEPQIRKI+ Q P +
Sbjct: 304 DEADRMLDMGFEPQIRKIVGQGMPPK 329
Score = 48.0 bits (109), Expect = 2e-04
Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 10/63 (15%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQIQQVA 241
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 183 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 242
Query: 242 ADF 250
F
Sbjct: 243 TKF 245
Score = 44.4 bits (100), Expect = 0.003
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +3
Query: 495 QTDFEWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
+T +SAT+PKE++ LA+D+L D YI + +G + S + NI Q + E EK +
Sbjct: 332 RTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSN--- 387
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKA 746
L EI ++ ++FVETKR A
Sbjct: 388 -LMEILMNEHSENLVLVFVETKRGA 411
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 92.7 bits (220), Expect = 9e-18
Identities = 44/96 (45%), Positives = 64/96 (66%), Gaps = 3/96 (3%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QRCTYLVLDEADR 435
+R+ C GG+ ++Q DL+RG EIV+ATPGR ID L L +R T++V+DEADR
Sbjct: 360 IRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADR 419
Query: 436 MLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RN 543
+ D+GFEPQI +I++ +RPD+Q + P K R+
Sbjct: 420 LFDLGFEPQITQIMKTVRPDKQCVLFSATFPNKLRS 455
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGPHLMF 268
S+TGSGKT++Y+LP + + Q P+ + + GP+ L+LAPTRELA QI + F
Sbjct: 300 SKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTS 359
Query: 269 VTRVC 283
+ VC
Sbjct: 360 IRSVC 364
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 92.3 bits (219), Expect = 1e-17
Identities = 48/105 (45%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
RF + +R+ CV+GG+ Q +++ +G +I++ATPGRL+ F EK +L YL+ D
Sbjct: 234 RFTEDTPIRSVCVYGGSDSYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLSSVRYLIFD 293
Query: 424 EADRMLDMGFEPQIRKIIE--QIRP--DRQTLSGQLLGPKK*RNL 546
EADRMLDMGFEPQIR+I E ++ P RQTL PK+ + L
Sbjct: 294 EADRMLDMGFEPQIREICEDNEMPPVGKRQTLMFSATFPKQIQRL 338
Score = 60.1 bits (139), Expect = 6e-08
Identities = 35/86 (40%), Positives = 51/86 (59%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+PK++++LA D+L DY+ I +G A + I I E+E K
Sbjct: 322 RQT-LMFSATFPKQIQRLAADFLDDYVFITVG----RAGSTVESIQQIILWVEEEIKQEA 376
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
+L +G+ G KT+IFVETKR A+
Sbjct: 377 ILDVLGEFAGKGQKTVIFVETKRGAD 402
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 8/61 (13%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDG--------PIALVLAPTRELAQQIQQVAAD 247
+QTGSGKT A++ P I I PP+ R P+AL+LAPTREL QQI + A
Sbjct: 175 AQTGSGKTAAFLFPIISDILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQIYEEAVR 234
Query: 248 F 250
F
Sbjct: 235 F 235
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 92.3 bits (219), Expect = 1e-17
Identities = 39/72 (54%), Positives = 55/72 (76%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R ++GG+ R Q DL+RG +I++ATPGRL D +++G NL+ +L+LDEADRMLD
Sbjct: 313 IRTNVLYGGSEVRSQIMDLDRGSDIIVATPGRLRDLIDRGKVNLKLIKFLILDEADRMLD 372
Query: 445 MGFEPQIRKIIE 480
MGF PQIR+I+E
Sbjct: 373 MGFAPQIREIVE 384
Score = 50.8 bits (116), Expect = 4e-05
Identities = 32/86 (37%), Positives = 54/86 (62%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+P+E+++LA+D+L +YI + +G + ++ +I+Q V +E K L
Sbjct: 395 RQTVM-FSATFPREIQQLAKDFLHNYIFLTVGRVGATSG-SIVQRVVYAEEDHKPRLLVK 452
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
LL E G+ T++FVE KR+A+
Sbjct: 453 LLLEQGE-----GLTVVFVEMKRRAD 473
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 10/63 (15%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVH-INNQPP---------IRRGDGPIALVLAPTRELAQQIQQVA 241
+QTGSGKT A++ P ++ +N+ PP I+R P+ALVL+PTRELA Q + +
Sbjct: 245 AQTGSGKTAAFLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELAIQTYEES 304
Query: 242 ADF 250
F
Sbjct: 305 RKF 307
>UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5464,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 307
Score = 91.5 bits (217), Expect = 2e-17
Identities = 58/142 (40%), Positives = 72/142 (50%), Gaps = 7/142 (4%)
Frame = +1
Query: 130 ASHCAHKQPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTT----SYVR-NTCVFGGA 294
A +CAH+ W+ FG G ++ + SA R ++R C G +
Sbjct: 173 ACYCAHQPSALLGAWRWTHMFGFGPHEGIGPAGSAGSIRLRKVLTHQKHLRVRRCAEGTS 232
Query: 295 P--KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 468
E+ DL R PG D L+RCTYLVLDEADRMLDMGFEPQIR
Sbjct: 233 NPGSGERCGDLHRHARASHRLPGGRED-------QLRRCTYLVLDEADRMLDMGFEPQIR 285
Query: 469 KIIEQIRPDRQTLSGQLLGPKK 534
KI++QIRPDRQTL PK+
Sbjct: 286 KIVDQIRPDRQTLMWSATWPKE 307
Score = 46.4 bits (105), Expect = 8e-04
Identities = 17/26 (65%), Positives = 26/26 (100%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
+KEPTPIQAQG+P+A+SG+++VG+A+
Sbjct: 106 FKEPTPIQAQGFPLALSGRDMVGIAQ 131
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 91.5 bits (217), Expect = 2e-17
Identities = 43/81 (53%), Positives = 58/81 (71%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R+ VFGG Q +L RGVEI+IATPGRL+D +++ T NL + LVLDEADRMLD
Sbjct: 116 LRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLD 175
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF P +++I+ + +RQTL
Sbjct: 176 MGFLPDLQRILNLLPKERQTL 196
Score = 37.1 bits (82), Expect = 0.46
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDG--PI-ALVLAPTRELAQQIQQVAADFGPH 259
+QTG+GKT ++ LP I + Q P+ AL+L PTRELA Q+ + H
Sbjct: 55 AQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKH 113
Score = 36.3 bits (80), Expect = 0.81
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ GY PTPIQA+ P+ +SG++++G A+
Sbjct: 26 IAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQ 56
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 91.5 bits (217), Expect = 2e-17
Identities = 50/105 (47%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F S +R ++GG EQ R+L+RG +++ATPGRL D + +G L+ +LVLD
Sbjct: 372 KFSYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLDDIINRGKIGLENLRFLVLD 431
Query: 424 EADRMLDMGFEPQIRKIIE--QIRP--DRQTLSGQLLGPKK*RNL 546
EADRMLDMGFEPQIR IIE + P RQTL PK + L
Sbjct: 432 EADRMLDMGFEPQIRHIIENRDMPPTGQRQTLMFSATFPKNIQEL 476
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+PK +++LA D+L +YI + +G + S + NI Q + E+EK + L
Sbjct: 460 RQT-LMFSATFPKNIQELASDFLSNYIFLAVGRVG-STSENITQTILWVNENEKRSYLLD 517
Query: 672 LLQEIGQSQ---EPGAKTIIFVETKRKAE 749
LL + + P + T+IFVETK+ A+
Sbjct: 518 LLSRLREGSPDYSPDSLTLIFVETKKGAD 546
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 10/63 (15%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI----------NNQPPIRRGDGPIALVLAPTRELAQQIQQVA 241
+QTGSGKT A+++P + + +N+P RR P+ LVLAPTRELA QI + A
Sbjct: 311 AQTGSGKTAAFLVPILNRMLEQGASMNPASNRPYQRRKQYPLGLVLAPTRELATQIYEEA 370
Query: 242 ADF 250
F
Sbjct: 371 KKF 373
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 91.5 bits (217), Expect = 2e-17
Identities = 45/96 (46%), Positives = 56/96 (58%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R+ GG P E + RGV IV+ATPGRL+D L+K L C YL +DEADRM+D
Sbjct: 288 IRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMID 347
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
MGFE +R I + RQTL PKK +N R
Sbjct: 348 MGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFAR 383
Score = 53.6 bits (123), Expect = 5e-06
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +2
Query: 98 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
TGSGKTL ++LP I+ Q P R +GP L++ P+RELA+Q ++ + HL
Sbjct: 223 TGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHL 280
Score = 40.3 bits (90), Expect = 0.050
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 3 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 95
G+ G K PTPIQ QG P ++G++L+G+A
Sbjct: 191 GLAAKGIKNPTPIQVQGLPTVLAGRDLIGIA 221
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 91.1 bits (216), Expect = 3e-17
Identities = 45/80 (56%), Positives = 55/80 (68%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F S VR V+GG R Q +D+ +G +++ATPGRL D LE+ L YLVLD
Sbjct: 313 KFSYRSLVRPCVVYGGRDIRGQLQDISQGCNMLVATPGRLSDMLERCKIGLDCIRYLVLD 372
Query: 424 EADRMLDMGFEPQIRKIIEQ 483
EADRMLDMGFEPQIRKI+EQ
Sbjct: 373 EADRMLDMGFEPQIRKIVEQ 392
Score = 53.6 bits (123), Expect = 5e-06
Identities = 32/86 (37%), Positives = 53/86 (61%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+P+E++ LA D+L DY+ + +G + S + NI Q + E+EK + L
Sbjct: 401 RQT-LMFSATFPREIQMLASDFLKDYLFLRVGKVG-STSQNITQRIVYVDENEKRDHLLD 458
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
+L +I + + ++FVETKR A+
Sbjct: 459 ILTDI----DSDSLILVFVETKRGAD 480
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIR-------RGDGPIALVLAPTRELAQQIQQVAADF 250
+QTGSGKT A+++P + + P + + P+AL+LAPTRELA QI A F
Sbjct: 255 AQTGSGKTAAFLIPLLSMMYQDGPGNSLSHSGYKKEYPVALILAPTRELAVQIYDEARKF 314
Query: 251 GPHLMFVTRVCLV 289
+ R C+V
Sbjct: 315 S--YRSLVRPCVV 325
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 91.1 bits (216), Expect = 3e-17
Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Frame = +1
Query: 247 FWTTSYVRNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEKGT---TNLQRCTYL 414
F S + C +GG P +Q ++RG + I+ AT GRLID L+ + + +R TY+
Sbjct: 605 FLNASGITIKCAYGGQPISDQIAMIKRGGIHILCATAGRLIDLLQSNSGRVLSFRRITYV 664
Query: 415 VLDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPK 531
VLDEADRM DMGFEPQ+ KI+ IRPDRQT+ PK
Sbjct: 665 VLDEADRMFDMGFEPQVMKILASIRPDRQTILFSATFPK 703
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/46 (58%), Positives = 37/46 (80%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
++TGSGKTLA+ +P I H+ +Q P++ DGPI L+LAPTREL+ QI
Sbjct: 553 AKTGSGKTLAFGIPMIRHVLDQRPLKPADGPIGLILAPTRELSLQI 598
Score = 40.7 bits (91), Expect = 0.038
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 15 MGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+GY PT IQAQ PIA SG++L+GVAK
Sbjct: 527 VGYARPTAIQAQAIPIAESGRDLIGVAK 554
Score = 35.1 bits (77), Expect = 1.9
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+PK + LA L ++ IG A I + +EK K+
Sbjct: 692 RQTIL-FSATFPKTMAALARKALDKPAEVIIGGRSKVAPEITQHITIVPPSYEK--KIAK 748
Query: 672 LLQEIGQ--SQEPGAKTIIFVETKRKAEN 752
LL +GQ S + A+ +IF E + AE+
Sbjct: 749 LLHHLGQTFSDDENAQVLIFTERQETAED 777
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 90.6 bits (215), Expect = 4e-17
Identities = 41/78 (52%), Positives = 57/78 (73%)
Frame = +1
Query: 274 TCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 453
T GGAP R+Q RDL +GV+I++ATPGRL D +++ L +LVLDEAD+MLD+GF
Sbjct: 208 THAIGGAPIRKQMRDLSKGVDILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGF 267
Query: 454 EPQIRKIIEQIRPDRQTL 507
P +++II ++ DRQTL
Sbjct: 268 LPAVKRIISKVNKDRQTL 285
Score = 51.2 bits (117), Expect = 3e-05
Identities = 26/63 (41%), Positives = 36/63 (57%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
K+ +QTG+GKT A+ LP I + P +G A++L+PTRELA QI + FG
Sbjct: 141 KDLVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFG 200
Query: 254 PHL 262
L
Sbjct: 201 KRL 203
Score = 41.5 bits (93), Expect = 0.022
Identities = 31/89 (34%), Positives = 45/89 (50%)
Frame = +3
Query: 483 NTPRQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENK 662
N RQT +SAT KE+KKL E YL D +Q+++ N + +I K+NK
Sbjct: 279 NKDRQT-LLFSATMSKEIKKLTETYLTDPVQVSV----TPENSTVDKIEQSLMHLSKQNK 333
Query: 663 LNVLLQEIGQSQEPGAKTIIFVETKRKAE 749
+ LQ I S P + I+F TK ++
Sbjct: 334 -GLALQRI-ISANPKKRVIVFSRTKHGSD 360
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 15 MGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+GY PTPIQ+Q P ++ K+LVG+A+
Sbjct: 121 LGYTLPTPIQSQAIPAVLNSKDLVGLAQ 148
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 90.6 bits (215), Expect = 4e-17
Identities = 42/78 (53%), Positives = 55/78 (70%)
Frame = +1
Query: 274 TCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 453
T V+GG +Q DL+RGV++V ATPGRL+D +E+GT L LVLDE DRMLDMGF
Sbjct: 233 TVVYGGVGYGKQREDLQRGVDVVAATPGRLLDHIEQGTMTLADVEILVLDEVDRMLDMGF 292
Query: 454 EPQIRKIIEQIRPDRQTL 507
P +++I++Q RQTL
Sbjct: 293 LPDVKRIVQQCPQARQTL 310
Score = 38.7 bits (86), Expect = 0.15
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
V MGY EPTPIQAQ P ++G+++ G A+
Sbjct: 148 VTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQ 178
Score = 35.1 bits (77), Expect = 1.9
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 235
++ + +QTG+GKT A+ LP + + R LVL PTRELA Q+++
Sbjct: 171 RDVTGSAQTGTGKTAAFALPILHKLGAHERRLR-----CLVLEPTRELALQVEE 219
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 90.6 bits (215), Expect = 4e-17
Identities = 49/103 (47%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Frame = +1
Query: 238 CCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEK--GTT---NLQR 402
C +F + R+ ++GGA K +Q R L G ++V+ATPGRL DFLE G T + +
Sbjct: 192 CAKFCPAAGCRSAVLYGGAAKGDQLRALRSGADVVVATPGRLNDFLEPPPGFTAPVSAVK 251
Query: 403 CTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPK 531
Y+VLDEADRMLDMGFEPQI+KI + RQT+ PK
Sbjct: 252 AAYVVLDEADRMLDMGFEPQIKKIFKLCPSARQTVMFTATWPK 294
Score = 51.6 bits (118), Expect = 2e-05
Identities = 32/89 (35%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGD--YIQINIGSLQLSANHNILQIVDICQEHEKENK- 662
RQT ++ATWPK V+K+A+ + +IQI G +L+AN +I Q V++ +E EK ++
Sbjct: 283 RQTVM-FTATWPKGVQKIADAFTTKPIHIQIGSGGDKLTANKSITQTVEVVEEEEKFDRC 341
Query: 663 LNVLLQEIGQSQEPGAKTIIFVETKRKAE 749
+ +L +E+G+++ I+F TKR+ +
Sbjct: 342 VAILKKELGKNE----TCIMFAGTKRRCD 366
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K GY PTPIQA+ WPI + GK++V +AK
Sbjct: 101 LKAQGYDAPTPIQAEAWPILLKGKDVVAIAK 131
Score = 41.5 bits (93), Expect = 0.022
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 13/68 (19%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI-----NNQPPIRRGDG--------PIALVLAPTRELAQQIQ 232
++TGSGKT ++LPA+ I P ++ DG P +VLAPTRELA QI
Sbjct: 130 AKTGSGKTCGFLLPALAKIVAEGTQKAPEMQLVDGRWRPGAVTPSVIVLAPTRELAIQIH 189
Query: 233 QVAADFGP 256
A F P
Sbjct: 190 DECAKFCP 197
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 89.4 bits (212), Expect = 8e-17
Identities = 45/88 (51%), Positives = 56/88 (63%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
RF VR + GG +QA L + EIVIATPGRL+D LE+G L LVLD
Sbjct: 93 RFGHARRVRGAVIIGGVGMAQQAEALRQKREIVIATPGRLVDHLEQGNARLDGIEALVLD 152
Query: 424 EADRMLDMGFEPQIRKIIEQIRPDRQTL 507
EADRMLDMGF+PQ+ +I+ ++ RQTL
Sbjct: 153 EADRMLDMGFKPQLDRILRRLPKQRQTL 180
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/60 (45%), Positives = 35/60 (58%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
K+ + TG+GKT A++LP I + +P R ALVLAPTRELA QI + FG
Sbjct: 42 KDVIGTAATGTGKTAAFLLPLIDRLAGKPGTR------ALVLAPTRELALQIGEELERFG 95
Score = 37.1 bits (82), Expect = 0.46
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 95
++ G++ PTPIQAQ P A++GK+++G A
Sbjct: 19 LRRAGFEHPTPIQAQAIPPALAGKDVIGTA 48
Score = 34.3 bits (75), Expect = 3.3
Identities = 28/86 (32%), Positives = 42/86 (48%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT EV A +L D +++ + +A Q+ + +HEK L
Sbjct: 177 RQT-LLFSATMAGEVADFARAHLRDPVRVEVARSGTTAARAEQQVF-LADQHEKLPLLLT 234
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
LL+ G S T+IF TKR+A+
Sbjct: 235 LLERDGDS------TLIFTRTKRRAD 254
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/96 (44%), Positives = 57/96 (59%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R GG R Q +++GV IV+ATPGRL D L K NL C YL LDEADR++D
Sbjct: 293 IRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVD 352
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
+GFE IR++ + + RQTL PKK +N +
Sbjct: 353 LGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAK 388
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = +2
Query: 98 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF 250
TGSGKTL ++LP I+ + PI G+GP +++ P+RELA+Q V F
Sbjct: 228 TGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQF 281
Score = 38.7 bits (86), Expect = 0.15
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 95
++ G +PTPIQ QG P+ +SG++++G+A
Sbjct: 197 LREKGIVQPTPIQVQGLPVVLSGRDMIGIA 226
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/81 (50%), Positives = 57/81 (70%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R V+GG P Q + L+RG +I++ATPGRL+D L + +L++ YLVLDEADRMLD
Sbjct: 105 MRVISVYGGVPVENQIKRLKRGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLD 164
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
+GF I+KI++ DRQTL
Sbjct: 165 LGFIDPIQKIMDYAADDRQTL 185
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGPHL 262
+QTG+GKT ++ LP I ++ P G P+ ALVLAPTRELA Q+ ++G L
Sbjct: 48 AQTGTGKTASFALPIIEKLSKNPI--DGYRPVRALVLAPTRELAIQVADNTLEYGRDL 103
Score = 35.9 bits (79), Expect = 1.1
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K +GY++PTPIQ+Q P+ + G +L+ A+
Sbjct: 19 LKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQ 49
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 88.6 bits (210), Expect = 1e-16
Identities = 40/81 (49%), Positives = 55/81 (67%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+ + C++GG K Q L+ GV+IVI TPGR+ D +E G L +++VLDEADRMLD
Sbjct: 259 ISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLD 318
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGFEP++R I+ Q RQT+
Sbjct: 319 MGFEPEVRAILSQTASVRQTV 339
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/70 (37%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEHEKENKLN 668
RQT +SATWP V +LA++++ + I++ IGS L+ANH+++QIV++ + ++++L
Sbjct: 336 RQTVM-FSATWPPAVHQLAQEFMDPNPIKVVIGSEDLAANHDVMQIVEVLDDRSRDSRLV 394
Query: 669 VLLQEIGQSQ 698
LL + ++Q
Sbjct: 395 ALLDKYHKAQ 404
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINN---QPPIRRGDGPIALVLAPTRELAQQIQQVAA 244
++F + TGSGKT+A+ +PA++H+ + ++G P LVL+PTRELAQQI V
Sbjct: 130 RDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGV-PRVLVLSPTRELAQQIADVLC 188
Query: 245 DFGPHLMFVTRVCL 286
+ G ++ VCL
Sbjct: 189 EAGAP-CGISSVCL 201
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+ + C++GG K Q L+ GV+IVI TPGR+ D +E G L ++++ D
Sbjct: 196 ISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVIAD 248
Score = 36.3 bits (80), Expect = 0.81
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVA 95
G++ P+PIQA WP + G++ +G+A
Sbjct: 111 GFERPSPIQAYAWPYLLDGRDFIGIA 136
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 88.6 bits (210), Expect = 1e-16
Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Frame = +1
Query: 277 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 456
CV+GG PK EQ L++ ++V+ATPGRL+D L++G+ +L + YLVLDEADRML+ GFE
Sbjct: 215 CVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFE 273
Query: 457 PQIRKII-EQIRPDRQTLSGQLLGPKK*RNL 546
I+ II E RQTL PK+ R L
Sbjct: 274 EDIKNIIRETDASKRQTLMFTATWPKEVREL 304
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNILQIVDICQEHEKENKLN 668
RQT ++ATWPKEV++LA ++ + I+++IG+ QL+AN I QIV++ KE KL
Sbjct: 288 RQT-LMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLL 346
Query: 669 VLLQEIGQSQEPGAKTIIFVETKRKA 746
LL++ + K +IF K++A
Sbjct: 347 ELLKKYHSGPKKNEKVLIFALYKKEA 372
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
++TGSGKT A+ +PAI H+ N R G LV++PTRELA QI
Sbjct: 156 AETGSGKTFAFGVPAISHLMNDQKKR---GIQVLVISPTRELASQI 198
Score = 39.1 bits (87), Expect = 0.12
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ +PTPIQA WP +SGK++VGVA+
Sbjct: 132 FPKPTPIQAVAWPYLLSGKDVVGVAE 157
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 87.8 bits (208), Expect = 3e-16
Identities = 41/76 (53%), Positives = 51/76 (67%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
+ GG P EQ LE+GV+++IATPGRL+D E+G L C LV+DEADRMLDMGF P
Sbjct: 106 LIGGVPMAEQQAALEKGVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIP 165
Query: 460 QIRKIIEQIRPDRQTL 507
I I ++ RQTL
Sbjct: 166 DIETICTKLPTSRQTL 181
Score = 38.3 bits (85), Expect = 0.20
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPH 259
+QTG+GKT +++LP I + + R P +L+L PTRELA Q+ + +G +
Sbjct: 45 AQTGTGKTASFVLPMIDILAHGRC--RARMPRSLILEPTRELAAQVAENFEKYGKY 98
Score = 33.1 bits (72), Expect = 7.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
V +GY+EPTP+QA P + ++L+ VA+
Sbjct: 16 VAELGYEEPTPVQAAAIPSVLMMRDLIAVAQ 46
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 87.8 bits (208), Expect = 3e-16
Identities = 41/81 (50%), Positives = 53/81 (65%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R GG +R Q RD+ G IV+ATPGRL DF+ +G NL L+LDE+DRMLD
Sbjct: 101 IRAAVAVGGLNERSQLRDIRGGANIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLD 160
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF P I++II + +RQTL
Sbjct: 161 MGFLPTIKRIIAAMPAERQTL 181
Score = 49.6 bits (113), Expect = 8e-05
Identities = 30/76 (39%), Positives = 45/76 (59%)
Frame = +2
Query: 8 KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 187
K+N + T S + + + K+ +QTG+GKTLA++LP I ++ +P R G
Sbjct: 19 KNNFTEPTPIQSLA-IEPALAGKDIVATAQTGTGKTLAFLLPTIQLLSTEP---RQPGVR 74
Query: 188 ALVLAPTRELAQQIQQ 235
AL+L PTRELA QI +
Sbjct: 75 ALILTPTRELALQINE 90
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 87.8 bits (208), Expect = 3e-16
Identities = 39/80 (48%), Positives = 55/80 (68%)
Frame = +1
Query: 268 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 447
R T +FGG + Q R L+RGV + IATPGRL+D +++G +L + VLDEADRMLDM
Sbjct: 99 RLTTIFGGVGQNPQVRALKRGVHVAIATPGRLLDLMDQGYVDLSQAKTFVLDEADRMLDM 158
Query: 448 GFEPQIRKIIEQIRPDRQTL 507
GF P ++ I+ ++ RQT+
Sbjct: 159 GFMPALKTIVSKLPKQRQTI 178
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMF 268
+QTG+GKT A+ LP + ++ P LVL+PTRELA QI Q +G ++ F
Sbjct: 40 AQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRNVKF 98
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 87.8 bits (208), Expect = 3e-16
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F + VR +GG Q RDL+RG I+IATPGRL+DF+ +G L +++LD
Sbjct: 412 KFSRGTVVRPVVAYGGTSMNHQIRDLQRGCHILIATPGRLMDFINRGLVGLDHVEFVILD 471
Query: 424 EADRMLDMGFEPQIRKIIEQ----IRPDRQTL 507
EADRMLDMGFE +IRK+ + DR TL
Sbjct: 472 EADRMLDMGFETEIRKLASSPGMPSKSDRHTL 503
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/81 (30%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEI 686
+SAT+P E+++LA D+L D++ + +G + + I+ + Q+ +K KL L+ ++
Sbjct: 505 FSATFPDEIQRLAHDFLREDFLFLTVGRVGGACTDVTQSIIQVDQD-DKRAKLLELISDV 563
Query: 687 GQSQEPGAKTIIFVETKRKAE 749
+++ ++T++FVETKR A+
Sbjct: 564 AETR---SRTLVFVETKRGAD 581
Score = 37.5 bits (83), Expect = 0.35
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVH-INN---QPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
+QTGSGKT A++LP + I N P A+V+ PTREL QI A F
Sbjct: 357 AQTGSGKTAAFLLPVLTKLITNGLQSSQFSEKQTPRAIVVGPTRELIYQIFLEARKF 413
>UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 154
Score = 87.8 bits (208), Expect = 3e-16
Identities = 47/95 (49%), Positives = 66/95 (69%)
Frame = +2
Query: 2 RCKDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDG 181
RC G+ +++ +RLA Y+ ++TGSGKTL+Y+LPA++ I+ Q +RRGDG
Sbjct: 17 RCL-RGVNHSNSDPVARLASRYM----VGITKTGSGKTLSYLLPALMPIDEQSRLRRGDG 71
Query: 182 PIALVLAPTRELAQQIQQVAADFGPHLMFVTRVCL 286
PIAL+LAPTRELAQQI+QV DFG + + +CL
Sbjct: 72 PIALILAPTRELAQQIKQVTDDFG-RAIKIKNICL 105
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 87.4 bits (207), Expect = 3e-16
Identities = 44/96 (45%), Positives = 54/96 (56%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R GG P E + RGV I++ATPGRL+D L+K L C YL +DEADRM+D
Sbjct: 290 IRCCLAIGGVPVSESLDVISRGVHIMVATPGRLMDMLDKKMVKLGVCRYLCMDEADRMID 349
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
MGFE +R I RQTL PKK +N R
Sbjct: 350 MGFEEDVRTIFSFFEGQRQTLLFSATMPKKIQNFAR 385
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Frame = +2
Query: 98 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQ----IQQVAADFGP 256
TGSGKTL ++LP I+ Q P R +GP L++ P+RELA+Q IQ
Sbjct: 225 TGSGKTLVFVLPLIMFCLEQEVALPFGRNEGPYGLIICPSRELAKQTYDIIQHYTNSLRH 284
Query: 257 HLMFVTRVCLVV 292
H R CL +
Sbjct: 285 HHCPEIRCCLAI 296
Score = 38.7 bits (86), Expect = 0.15
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 3 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 95
G++ G +PTPIQ QG P +SG++++G+A
Sbjct: 193 GLEQKGITKPTPIQVQGIPAVLSGRDIIGIA 223
Score = 33.1 bits (72), Expect = 7.6
Identities = 26/86 (30%), Positives = 47/86 (54%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT PK+++ A L + IN+G +A+ N++Q V+ ++ E K+
Sbjct: 367 RQT-LLFSATMPKKIQNFARSALVKPVTINVGRAG-AASMNVIQEVEYVKQ---EAKIVY 421
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
LL+ + ++ P +IF E K+ +
Sbjct: 422 LLECLKKTPPP---VLIFAEKKQDVD 444
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 87.4 bits (207), Expect = 3e-16
Identities = 42/93 (45%), Positives = 61/93 (65%)
Frame = +1
Query: 256 TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADR 435
T V+ T ++GG +Q +DLE+GV+IV+ TPGR+ID L + T +L YLVLDEADR
Sbjct: 114 TKRVKITTLYGGQSLEKQFKDLEKGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADR 173
Query: 436 MLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK 534
MLDMGF + +II++ +++T PK+
Sbjct: 174 MLDMGFLDDVLEIIKRTGENKRTFLFSATMPKE 206
Score = 33.9 bits (74), Expect = 4.3
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
K+ ++QTG+GKT A+ +P + I+ + A+++ PTRELA QI
Sbjct: 57 KDLIAQAQTGTGKTAAFGIPLLERID----FKANKFVKAIIVTPTRELALQI 104
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 87.4 bits (207), Expect = 3e-16
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
VR V+GGA R Q +L RG ++++ATPGRL+D +G +L+LDEADRMLD
Sbjct: 265 VRCVVVYGGADPRHQVHELSRGCKLLVATPGRLMDMFSRGYVRFSEIRFLILDEADRMLD 324
Query: 445 MGFEPQIRKIIE 480
MGFEPQIR I++
Sbjct: 325 MGFEPQIRMIVQ 336
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAI----VHINNQPPIRRG--DGPIALVLAPTRELAQQIQQVAADFG 253
+QTGSGKT +Y++PAI ++I+N+PP G P AL+LAPTREL+ QI A F
Sbjct: 201 AQTGSGKTASYLIPAINEILLNISNRPPYSPGSHSSPQALILAPTRELSLQIYGEARKFT 260
Query: 254 PH 259
H
Sbjct: 261 YH 262
Score = 33.1 bits (72), Expect = 7.6
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
VK GY +PTP+Q+ G P A++ ++L+ A+
Sbjct: 172 VKRCGYTKPTPVQSLGIPTALNHRDLMACAQ 202
>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
Dugesia japonica|Rep: Putative RNA helicase protein -
Dugesia japonica (Planarian)
Length = 515
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/76 (52%), Positives = 52/76 (68%)
Frame = +1
Query: 259 SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRM 438
+++R+ V GG R Q D RG +IATPGRL D ++G +L+ C LV+DEADRM
Sbjct: 204 THLRSVSVIGGVDARSQINDASRGCHALIATPGRLKDLTDRGIFSLKYCNKLVIDEADRM 263
Query: 439 LDMGFEPQIRKIIEQI 486
LDMGFEPQIR+II +
Sbjct: 264 LDMGFEPQIREIINNL 279
Score = 43.2 bits (97), Expect = 0.007
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 10/60 (16%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPP------IRRGDG----PIALVLAPTRELAQQIQQVA 241
++TGSGKT+AY+ P + +I P +++ D P+ LVLAPTREL QI VA
Sbjct: 138 AETGSGKTIAYLAPLLNNIMKHYPEEMMNELKQNDEELQYPLLLVLAPTRELVNQITSVA 197
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 87.0 bits (206), Expect = 4e-16
Identities = 42/81 (51%), Positives = 57/81 (70%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R+T V+GG Q + L RGVE+VIATPGRL+D +++ + NL + LVLDEADRMLD
Sbjct: 125 LRSTVVYGGVDINPQIQTLRRGVELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLD 184
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF P +++II + RQ L
Sbjct: 185 MGFLPDLQRIINLLPKTRQNL 205
Score = 36.3 bits (80), Expect = 0.81
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ GY +PTPIQA+ P+ M+G +++G A+
Sbjct: 35 IDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQ 65
Score = 35.5 bits (78), Expect = 1.4
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPI-ALVLAPTRELAQQI 229
+QTG+GKT + LP + + N P R P+ AL+L PTRELA Q+
Sbjct: 64 AQTGTGKTAGFSLPILNRLMPLATENTSPARH---PVRALILTPTRELADQV 112
>UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG09816;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG09816 - Caenorhabditis
briggsae
Length = 628
Score = 86.6 bits (205), Expect = 6e-16
Identities = 39/73 (53%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = +1
Query: 265 VRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 441
+ + ++GG ++Q L G I+IATPGRL+D +E+G L+ C YLVLDEADRML
Sbjct: 272 ITSALLYGGRENYKDQIHKLRLGCHILIATPGRLLDVMEQGLIGLEGCRYLVLDEADRML 331
Query: 442 DMGFEPQIRKIIE 480
DMGFEPQIR+++E
Sbjct: 332 DMGFEPQIRQVVE 344
Score = 51.6 bits (118), Expect = 2e-05
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEI 686
+SAT+PKE++ LA+D+L +Y+ + +G + S + NI+Q + +E EK + L LL
Sbjct: 359 FSATFPKEIQLLAQDFLKQNYVFLAVGRVG-STSENIMQKIVWVEEDEKRSYLMDLLDAT 417
Query: 687 GQSQEPGAKTIIFVETKRKAEN 752
G S + T++FVETKR A +
Sbjct: 418 GDS----SLTLVFVETKRGASD 435
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 86.2 bits (204), Expect = 8e-16
Identities = 40/81 (49%), Positives = 54/81 (66%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R VFGG Q L+ GVEI++ATPGRL+D +E+ N + LVLDEADRMLD
Sbjct: 110 LRTAVVFGGINIEPQIAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLD 169
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF P I++++ + P RQ+L
Sbjct: 170 MGFLPDIKRVMALLSPQRQSL 190
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINN--QPPIRRGDGPI-ALVLAPTRELAQQIQQVAA 244
K+ +QTG+GKT + LP + + + P+ AL++APTRELA QI +
Sbjct: 43 KDVMASAQTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVR 102
Query: 245 DFGPHLMFVTRV 280
+G +L T V
Sbjct: 103 KYGKYLALRTAV 114
Score = 33.5 bits (73), Expect = 5.7
Identities = 25/89 (28%), Positives = 48/89 (53%)
Frame = +3
Query: 486 TPRQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 665
+P++ +SAT+ E++KLA+ L ++I ++Q + N +I ++ + ++K
Sbjct: 184 SPQRQSLMFSATFSGEIRKLADSLLKQPVRIE-AAVQNTVNESISHVIHWV---KPDSKF 239
Query: 666 NVLLQEIGQSQEPGAKTIIFVETKRKAEN 752
+LL I Q A +IFV+TK A +
Sbjct: 240 ALLLHLIRQQNLKQA--LIFVKTKHGASH 266
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 86.2 bits (204), Expect = 8e-16
Identities = 41/89 (46%), Positives = 57/89 (64%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
VR T +FGG + Q + LE GV+I++A PGRL+D +E+G +L + LVLDEAD+MLD
Sbjct: 109 VRVTTIFGGVSQVHQVKALEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLD 168
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPK 531
MGF I +I+ + DR T+ PK
Sbjct: 169 MGFAKPIERIVATLPEDRHTVLFSATMPK 197
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPH 259
+QTG+GKT ++ LP + + P +G LVLAPTREL QI F H
Sbjct: 51 AQTGTGKTASFALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRH 106
Score = 37.1 bits (82), Expect = 0.46
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVAK 98
GY +PTPIQAQ P+ + G++L+G+A+
Sbjct: 26 GYVKPTPIQAQSIPLLLEGRDLLGLAQ 52
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 85.8 bits (203), Expect = 1e-15
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +1
Query: 268 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 447
R C+ GGAP Q + L + V++V+ATPGRLID LE+G + R LVLDEADRMLDM
Sbjct: 104 RTACLVGGAPYGLQLKRLSQPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLDM 163
Query: 448 GFEPQIRKIIEQIRPDRQTL 507
GF I+ I + +RQTL
Sbjct: 164 GFVDDIKAIAARCPAERQTL 183
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
S TGSGKT A++LP+I + +P ++ GP LVL PTRELA Q+++ A +G +
Sbjct: 45 SHTGSGKTAAFLLPSIQRLLAEPAVK-SIGPRVLVLTPTRELALQVEKAAMTYGKEMRRF 103
Query: 272 TRVCLV 289
CLV
Sbjct: 104 RTACLV 109
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 85.8 bits (203), Expect = 1e-15
Identities = 41/73 (56%), Positives = 50/73 (68%)
Frame = +1
Query: 268 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 447
R V GG QA +L RGVEIVI TPGRL D LEK T L +C Y++LDEADRM+DM
Sbjct: 804 RTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEADRMMDM 863
Query: 448 GFEPQIRKIIEQI 486
GFE + I+++I
Sbjct: 864 GFEDTVHYILDKI 876
Score = 54.0 bits (124), Expect = 4e-06
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAADFGPH 259
++TGSGKT A++LP + ++ PP+ DGP ALV+AP+RELA QI + F +
Sbjct: 742 AETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASY 800
Score = 36.3 bits (80), Expect = 0.81
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K Y++PTPIQ Q PIA+ ++L+G+A+
Sbjct: 713 IKKAKYEKPTPIQMQAIPIALEMRDLIGIAE 743
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/79 (49%), Positives = 56/79 (70%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R + GG +QA L +GVEI+IATPGR+ D LEK T L +C+Y++LDEADRM+D
Sbjct: 251 IRTLSIVGGRNIDQQAFSLRKGVEIIIATPGRMQDCLEKTLTVLVQCSYVILDEADRMID 310
Query: 445 MGFEPQIRKIIEQIRPDRQ 501
+GF+ + I++QI P+ Q
Sbjct: 311 LGFQDSLNFILDQIPPEIQ 329
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/53 (45%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVA 241
++TGSGKT+A+++P I ++ N+P + +GP L+LAP RELA QI+ A
Sbjct: 186 AETGSGKTIAFLIPLISYVGNKPILDYKTSQEGPYGLILAPARELALQIEDEA 238
Score = 35.5 bits (78), Expect = 1.4
Identities = 12/31 (38%), Positives = 24/31 (77%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ +GY++PTPIQ Q PI + ++++G+A+
Sbjct: 157 IRNIGYEKPTPIQMQCIPIGLKLRDMIGIAE 187
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/81 (48%), Positives = 54/81 (66%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R CV+GG Q LE G +I+IATPGRL+D L G N+ + LVLDEADRMLD
Sbjct: 106 LRIVCVYGGTSIGVQKNKLEEGADILIATPGRLLDHLFNGNVNISKTGVLVLDEADRMLD 165
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF P +++I+ ++ D+Q +
Sbjct: 166 MGFWPDLQRILRRLPNDKQIM 186
Score = 46.4 bits (105), Expect = 8e-04
Identities = 25/62 (40%), Positives = 35/62 (56%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
K+ +QTG+GKT A+ LP I + + +R P AL+L PTRELAQQ+ +
Sbjct: 45 KDLLAAAQTGTGKTAAFGLPIIQAVQQK---KRNGTPHALILVPTRELAQQVFDNLTQYA 101
Query: 254 PH 259
H
Sbjct: 102 EH 103
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/89 (44%), Positives = 58/89 (65%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+ + VFGG R Q + L RGV+I++ATPGRL+D +E+ +L+ +L+LDEADRMLD
Sbjct: 106 ISHCVVFGGVSVRPQIQALARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLD 165
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPK 531
MGF + KI+ + DRQ++ PK
Sbjct: 166 MGFVRDVMKIVGKCPDDRQSMMFSATMPK 194
Score = 43.2 bits (97), Expect = 0.007
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 247
+QTG+GKT A+ LP + H + +P R AL+L+PTRELA QI + AD
Sbjct: 48 AQTGTGKTAAFALPLLHHLMTVGGKPTTRTTK---ALILSPTRELAVQIAESIAD 99
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/90 (45%), Positives = 54/90 (60%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R+ GG R Q ++RGV IV+ATPGRL D L K +L C YL LDEADR++D
Sbjct: 257 LRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVD 316
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK 534
+GFE IR++ + + RQTL P K
Sbjct: 317 LGFEDDIREVFDHFKSQRQTLLFSATMPTK 346
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Frame = +2
Query: 98 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF 250
TGSGKTL ++LP I+ + PI G+GPI L++ P+RELA+Q +V F
Sbjct: 192 TGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQF 245
Score = 38.3 bits (85), Expect = 0.20
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 95
+K G +PTPIQ QG P+ ++G++++G+A
Sbjct: 161 LKEKGIVQPTPIQVQGLPVILAGRDMIGIA 190
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 84.6 bits (200), Expect = 2e-15
Identities = 42/87 (48%), Positives = 54/87 (62%)
Frame = +1
Query: 271 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 450
+T GG P Q R L +GVE+++ATPGRL+D ++ L +LVLDEADRMLDMG
Sbjct: 120 STLAIGGVPMGRQVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMG 179
Query: 451 FEPQIRKIIEQIRPDRQTLSGQLLGPK 531
F IRKI+ ++ RQTL PK
Sbjct: 180 FINDIRKIVAKLPIKRQTLFFSATMPK 206
Score = 36.3 bits (80), Expect = 0.81
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
+QTG+GKT ++ LP + + + LVL+PTREL+ QI +G H+
Sbjct: 60 AQTGTGKTASFALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHI 116
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
Y PTPIQAQ P A++G+++VG+A+
Sbjct: 36 YVTPTPIQAQTIPTALTGRDVVGIAQ 61
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 84.6 bits (200), Expect = 2e-15
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = +1
Query: 271 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 450
+T +FGG + Q L++G++I+IATPGRL+D + +G +L+ + VLDEADRMLDMG
Sbjct: 186 STVIFGGVNQNPQTASLQKGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMG 245
Query: 451 FEPQIRKIIEQIRPDRQTL 507
F IRKI+ ++ +Q+L
Sbjct: 246 FIHDIRKILAELPKKKQSL 264
Score = 39.5 bits (88), Expect = 0.087
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPH 259
+QTG+GKT A+ +P + +N + +L++ PTRELA QI + +G H
Sbjct: 126 AQTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRH 181
Score = 35.1 bits (77), Expect = 1.9
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ GY+ PTPIQA+ P+ + G +L+G A+
Sbjct: 97 IEEEGYQTPTPIQAEAIPLILDGNDLLGCAQ 127
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/83 (48%), Positives = 56/83 (67%)
Frame = +1
Query: 259 SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRM 438
S V + V+GG EQ R L G I++ATPGRL+D L K +L + T+LV DEADRM
Sbjct: 110 SSVTSVMVYGGVSIGEQIRQLANGTHILVATPGRLLDLLRKRALSLSQLTHLVFDEADRM 169
Query: 439 LDMGFEPQIRKIIEQIRPDRQTL 507
LDMGF+ +I ++++++ RQTL
Sbjct: 170 LDMGFKDEIVEVLKRLPSTRQTL 192
Score = 39.5 bits (88), Expect = 0.087
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 9/55 (16%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAI----VHINN---QPPIRR-GDGPI-ALVLAPTRELAQQI 229
+QTG+GKT A+ LP + H +N QP + PI ALVL PTRELAQQ+
Sbjct: 45 AQTGTGKTAAFALPLLHQLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQV 99
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/90 (44%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R+ ++GG + Q + L+RG I++ATPGRL+D + +G L + VLDEADRMLD
Sbjct: 104 LRSVLIYGGVGQGNQVKALKRGAHILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLD 163
Query: 445 MGFEPQIRKIIEQIRPDRQTL-SGQLLGPK 531
MGF P +++II Q+ RQ+L L PK
Sbjct: 164 MGFLPDLKRIITQLPTQRQSLFFSATLAPK 193
Score = 46.4 bits (105), Expect = 8e-04
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
+QTG+GKT A LP + + P+ALVLAPTRELA QI +G HL
Sbjct: 46 AQTGTGKTAALALPILNQLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHL 102
Score = 33.9 bits (74), Expect = 4.3
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
YK PTPIQAQ P A+ G++++G A+
Sbjct: 22 YKIPTPIQAQTIPAALEGRDVLGCAQ 47
>UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 548
Score = 84.6 bits (200), Expect = 2e-15
Identities = 39/72 (54%), Positives = 50/72 (69%)
Frame = +1
Query: 262 YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 441
+ R V+GG + Q +L +G +IATPGRLIDFL++G + C +VLDEADRML
Sbjct: 218 FPRAVGVYGGQNRSRQIHELSKGCHFMIATPGRLIDFLDEGMLRMDHCHSVVLDEADRML 277
Query: 442 DMGFEPQIRKII 477
DMGFE QIRKI+
Sbjct: 278 DMGFEHQIRKIL 289
Score = 47.6 bits (108), Expect = 3e-04
Identities = 30/56 (53%), Positives = 34/56 (60%), Gaps = 10/56 (17%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPP------IRRGD----GPIALVLAPTRELAQQI 229
SQTGSGKTLAY+LP + I N P + + D P ALVL PTREL QQI
Sbjct: 151 SQTGSGKTLAYVLPIVNRILNSYPKLAMNTLAKSDLNIQCPSALVLVPTRELVQQI 206
>UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Takifugu
rubripes|Rep: Probable ATP-dependent RNA helicase DDX43
(EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein
HAGE) (Helical antigen). - Takifugu rubripes
Length = 510
Score = 84.2 bits (199), Expect = 3e-15
Identities = 58/158 (36%), Positives = 76/158 (48%), Gaps = 26/158 (16%)
Frame = +1
Query: 151 QPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTTSYVRNTCVFGGAPKREQARDLERG 330
QP ER L + ++ A C ++ Y ++ CV+GG ++ Q +ERG
Sbjct: 140 QPVPKCERNGPGMLVLTPTRELALQVDAECKKYSYKDY-KSVCVYGGGDRKAQIHKVERG 198
Query: 331 VEIVIATPGRLIDFLEKGTTNLQRCTYL--------------------------VLDEAD 432
V+IVIATPGRL D NL+ TYL VLDEAD
Sbjct: 199 VDIVIATPGRLHDLQMNKLINLRSITYLVSCLHVFVFKMWDSRLRSVRLFLCNKVLDEAD 258
Query: 433 RMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
RMLD+GFEPQI KI+ +RPDRQT+ P R +
Sbjct: 259 RMLDLGFEPQIMKILLDVRPDRQTVMTSATWPASVRRM 296
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQP-PIRRGDGPIALVLAPTRELAQQI 229
+QTG+GKTLAY+LP +H+N QP P +GP LVL PTRELA Q+
Sbjct: 119 AQTGTGKTLAYLLPGFIHMNGQPVPKCERNGPGMLVLTPTRELALQV 165
Score = 50.4 bits (115), Expect = 5e-05
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +3
Query: 513 SATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ-IVDICQEHEKENKLNVLLQEIG 689
SATWP V+++A YL D + + +GSL L+A ++ Q I+ + E +K LN L
Sbjct: 286 SATWPASVRRMATSYLKDPMMVYVGSLDLTAVSSVQQKILIVSAEEKKPYLLNFL----- 340
Query: 690 QSQEPGAKTIIFVETKRKAEN 752
++ EP K +IFV K A++
Sbjct: 341 KNMEPQDKVLIFVGRKLTADD 361
Score = 41.9 bits (94), Expect = 0.016
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
VK G+ PTPIQ+Q WP+ +SG +L+ +A+
Sbjct: 90 VKHAGFVNPTPIQSQAWPVLLSGDDLIAIAQ 120
>UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11;
Plasmodium|Rep: DEAD-box helicase 11 - Plasmodium
falciparum
Length = 941
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/78 (50%), Positives = 54/78 (69%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F + ++ ++GG + Q +L++G +I++ATPGRL D LEKG L T+LVLD
Sbjct: 473 KFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLD 532
Query: 424 EADRMLDMGFEPQIRKII 477
EADRMLDMGF PQIR I+
Sbjct: 533 EADRMLDMGFSPQIRSIV 550
Score = 49.2 bits (112), Expect = 1e-04
Identities = 35/86 (40%), Positives = 51/86 (59%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+ KE++ LA++YL Y + +G + S N I Q + +E ENK N
Sbjct: 581 RQT-IMFSATFRKEIQVLAKEYLCKYTFLLVGKVG-STNEYIKQNLVFVEE---ENKCNY 635
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
LL + ++ TI+FVETKRKA+
Sbjct: 636 LLNLLAENN--NGLTILFVETKRKAD 659
Score = 41.1 bits (92), Expect = 0.029
Identities = 31/69 (44%), Positives = 35/69 (50%), Gaps = 16/69 (23%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVH-INNQPP---------------IRRGDGPIALVLAPTRELAQ 223
+QTGSGKT Y+LP I H + N PP R PI L+LAPTRELA
Sbjct: 406 AQTGSGKTAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPICLILAPTRELAV 465
Query: 224 QIQQVAADF 250
QI A F
Sbjct: 466 QIFYDAKKF 474
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/71 (54%), Positives = 50/71 (70%)
Frame = +1
Query: 268 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 447
R T + GG EQ + +G EIVIATPGRLID LE+ L +C Y+VLDEADRM+DM
Sbjct: 419 RVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDM 478
Query: 448 GFEPQIRKIIE 480
GFEPQ+ +++
Sbjct: 479 GFEPQVAGVLD 489
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
++TGSGKT A++LP + +I+ PP+ +GP A+V+APTRELAQQI++ F +L
Sbjct: 357 AETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYL 416
Query: 263 MF 268
F
Sbjct: 417 GF 418
Score = 32.7 bits (71), Expect = 10.0
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
V+ GYK+P+PIQ P+ + ++++G+A+
Sbjct: 328 VERAGYKKPSPIQMAAIPLGLQQRDVIGIAE 358
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/76 (53%), Positives = 55/76 (72%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V+GG R Q L +GV+I+IATPGRL+D L T+L + LVLDEADRMLDMGF P
Sbjct: 111 VYGGTSIRVQQEQLAKGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGFLP 170
Query: 460 QIRKIIEQIRPDRQTL 507
I++I++++ +RQTL
Sbjct: 171 DIQRIMKRMPEERQTL 186
Score = 46.4 bits (105), Expect = 8e-04
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADFGPH 259
+QTG+GKT AY LP I ++ Q P AL+LAPTRELAQQ+ + H
Sbjct: 47 AQTGTGKTAAYGLPLIQMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQH 103
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 83.8 bits (198), Expect = 4e-15
Identities = 44/84 (52%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 441
V V+GGA +Q L+RG +IV+ATPGRLIDF K N C LV+DEADRML
Sbjct: 197 VNADAVYGGAEYEKQMELLKRGKTDIVVATPGRLIDFHNKRLVNFDNCQTLVIDEADRML 256
Query: 442 DMGFEPQIRKIIEQI--RPDRQTL 507
DMGF P +R+I+ + + DRQTL
Sbjct: 257 DMGFIPDVRRIVSWMPKKRDRQTL 280
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADF 250
K+ ++ TG+GKT +++ + + G P AL+LAPTREL QI + A
Sbjct: 132 KDLIGKANTGTGKTAVFLVGVMARLLADKKGGLGKRTPRALILAPTRELVMQIVKDAKKL 191
Query: 251 G 253
G
Sbjct: 192 G 192
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +1
Query: 256 TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADR 435
T +V T V GG + Q L+ G +I++ATPGRL+D +E+G +L LVLDEADR
Sbjct: 165 TGHVAVTVV-GGVSYKPQTAALKYGCDILVATPGRLVDLIEQGACHLDEVKVLVLDEADR 223
Query: 436 MLDMGFEPQIRKIIEQIRPDRQTL 507
MLDMGF P +R+I+ + +RQTL
Sbjct: 224 MLDMGFLPAVRRIVRETPAERQTL 247
Score = 44.8 bits (101), Expect = 0.002
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 19/69 (27%)
Frame = +2
Query: 92 SQTGSGKTLAYILPA---IVHINNQPPIRR----------------GDGPIALVLAPTRE 214
+QTG+GKT A++LP + HI P+R G GP+ LV+ PTRE
Sbjct: 90 AQTGTGKTAAFLLPTMNNLEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPVMLVITPTRE 149
Query: 215 LAQQIQQVA 241
LAQQI +VA
Sbjct: 150 LAQQIDEVA 158
Score = 33.9 bits (74), Expect = 4.3
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ +GY PTP+QA P+ + G++L+ A+
Sbjct: 61 IENLGYTAPTPVQAGSIPVVLEGRDLLAAAQ 91
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 83.4 bits (197), Expect = 5e-15
Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
VFGG +Q R LE+ V++VI TPGR+ID+ G+ L + LV+DEADRMLDMGF P
Sbjct: 233 VFGGMDHEKQRRSLEQPVDLVIGTPGRIIDYSRGGSLKLSKVEVLVIDEADRMLDMGFIP 292
Query: 460 QIRKIIEQI--RPDRQTL 507
+++I+ Q+ + +RQTL
Sbjct: 293 DVKRIVSQLPRKGERQTL 310
Score = 53.6 bits (123), Expect = 5e-06
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVA 241
++ + ++QTG+GKT A++L + N P R G P ALVLAPTRELA QIQ+ A
Sbjct: 163 RDLAGKAQTGTGKTAAFLLAVFTRLLNHPLEERKPGCPRALVLAPTRELAMQIQKDA 219
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 83.4 bits (197), Expect = 5e-15
Identities = 42/99 (42%), Positives = 65/99 (65%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
VR+ C++GGAP +Q L++ +IV+ATPGRL+D +++ T L + +VLDEADRMLD
Sbjct: 110 VRSVCLYGGAPIEKQITTLKKHPQIVVATPGRLMDHMKRRTVKLDKVETVVLDEADRMLD 169
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLRITW 561
MGF + +I++QI+ R+ L L R ++ I+W
Sbjct: 170 MGFIHDVTRILDQIK-SRKNLG--LFSATISREVMDISW 205
Score = 52.4 bits (120), Expect = 1e-05
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +2
Query: 71 WKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
WK+ ++ TG+GKT A+ +P + HI+ + D ALVLAPTRELA QIQ D
Sbjct: 49 WKDVIAKAPTGTGKTFAFGIPMVEHIDPE-----SDAVQALVLAPTRELALQIQDELRDL 103
Query: 251 GPHLMFVTRVCL 286
V VCL
Sbjct: 104 CEFKEGVRSVCL 115
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 83.4 bits (197), Expect = 5e-15
Identities = 41/96 (42%), Positives = 57/96 (59%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R+ ++GG + Q + L RGVEI + PGRL+D LE+GT L+ L+LDEAD+M D
Sbjct: 99 LRSVTLYGGVGYQGQIQRLRRGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFD 158
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
MGF P +R+I+ RQT+ P R L R
Sbjct: 159 MGFLPDVRRILRLAPAQRQTMLFSATMPDAIRALAR 194
Score = 43.2 bits (97), Expect = 0.007
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPH 259
+QTG+GKT A++LP + + P RG A+++ PTRELA+QIQ V G +
Sbjct: 45 AQTGTGKTAAFVLPILQRLMRGP---RGRVR-AMIVTPTRELAEQIQGVIEALGKY 96
Score = 38.7 bits (86), Expect = 0.15
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 3 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
G++ +GY PTPIQ Q P A+ G++++G+A+
Sbjct: 15 GIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQ 46
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase
PRP28, putative; n=2; Eukaryota|Rep: Pre-mRNA splicing
factor RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 83.4 bits (197), Expect = 5e-15
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 268 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 447
R V GG QA +L +GVEI+I TPGR+ D LEK T L +C Y++LDEADRM+DM
Sbjct: 687 RTVAVVGGRNAEAQAFELRKGVEIIIGTPGRIHDCLEKAYTVLNQCNYVILDEADRMMDM 746
Query: 448 GFEPQIRKIIEQI 486
GFE + I+++I
Sbjct: 747 GFEDSVHFILDKI 759
Score = 53.2 bits (122), Expect = 7e-06
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQI 229
++TGSGKT A++LP + ++ PP+ DGP AL++AP+RELA QI
Sbjct: 625 AETGSGKTAAFVLPMLAYVKQLPPLTYETSQDGPYALIIAPSRELAIQI 673
Score = 36.3 bits (80), Expect = 0.81
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K Y++PTPIQ Q PIA+ ++L+G+A+
Sbjct: 596 IKKAKYEKPTPIQMQAIPIALEMRDLIGIAE 626
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 83.0 bits (196), Expect = 7e-15
Identities = 41/89 (46%), Positives = 54/89 (60%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
++GG Q R L R EI++ TPGRL+D + +GT +L Y+VLDEAD MLDMGF P
Sbjct: 105 IYGGQSIELQLRSLRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLP 164
Query: 460 QIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
I+KI+ Q +RQT P + R L
Sbjct: 165 DIQKILSQCPRERQTFLFSATLPDEVREL 193
Score = 37.9 bits (84), Expect = 0.27
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 235
++QTG+GKT ++ +P + N+ + +G+G ALVL PTRELA Q+ +
Sbjct: 47 QAQTGTGKTASFGIPIL----NR--VIKGEGLQALVLCPTRELAVQVTE 89
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVAK 98
G+++PTPIQ + PIAM+G +L+G A+
Sbjct: 23 GFEKPTPIQVKSIPIAMAGLDLMGQAQ 49
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 83.0 bits (196), Expect = 7e-15
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADR 435
+R V+GG+ Q L+RGVEI++ TPGR+ID L TNL R +++VLDEADR
Sbjct: 771 LRILAVYGGSNIGTQLNTLKRGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADR 830
Query: 436 MLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
+LD+GFE QI I+ R D+QT P +NL +
Sbjct: 831 LLDLGFESQIHNILNNCRKDKQTAMISATFPNYIQNLAK 869
Score = 70.9 bits (166), Expect = 3e-11
Identities = 28/53 (52%), Positives = 42/53 (79%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
++TGSGKTL+Y+ P I H+ +QPP+R DGPIA++L PTREL++Q++ A +
Sbjct: 713 AETGSGKTLSYLFPLIRHVLHQPPLRNNDGPIAIILTPTRELSKQVKSEARPY 765
>UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Candida glabrata|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 816
Score = 83.0 bits (196), Expect = 7e-15
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ---RCTYLVLDEADR 435
+ + C GG+ ++Q L+ GVEI IATPGR ID L NL R +++V+DEADR
Sbjct: 355 ISSICCTGGSDLKKQIDKLKTGVEIAIATPGRFIDLLSLNGGNLVSTLRISFVVMDEADR 414
Query: 436 MLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RN 543
+ D GFEPQI ++ +RPDRQ + P K N
Sbjct: 415 LFDFGFEPQIASVLRTVRPDRQCVLFSATFPSKVSN 450
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/49 (57%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQ 235
S+TGSGKT++Y+LP I H+ Q +R G+ GPIA++ APTRELA QI +
Sbjct: 296 SKTGSGKTISYLLPMIRHVKAQKKLRNGETGPIAVIFAPTRELAVQINE 344
Score = 38.3 bits (85), Expect = 0.20
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
+SAT+P +V A +L +QI + + + N I Q IC + + K + L ++
Sbjct: 440 FSATFPSKVSNFASRFLDSPLQITVNAEGM-VNERINQKFTICSDESDKFKELLSLLKVF 498
Query: 690 QSQEPGAKTIIFVETKR 740
S+ KTIIFV +++
Sbjct: 499 NSETVDEKTIIFVSSQQ 515
Score = 33.1 bits (72), Expect = 7.6
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
YK TPIQ Q P MSG++++G++K
Sbjct: 272 YKSLTPIQTQTIPAIMSGRDVIGISK 297
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 82.6 bits (195), Expect = 9e-15
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFL---EKGTTNLQRCTYLVLDEADRMLDMG 450
V+GG+ Q L++GVEI++ TPGR+ID L TNL R +++VLDEADR+LD+G
Sbjct: 676 VYGGSNIGAQLNVLKKGVEIIVGTPGRIIDILTISNSKVTNLNRASFIVLDEADRLLDLG 735
Query: 451 FEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
FE QI I+ R D+QT P +NL +
Sbjct: 736 FESQIHSILNNCRKDKQTAMISATFPNYIQNLAK 769
Score = 60.5 bits (140), Expect = 4e-08
Identities = 24/51 (47%), Positives = 38/51 (74%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 244
++TGSGKT++Y+ P I H+ +Q +R DGPI ++L PTREL+ Q++ A+
Sbjct: 613 AETGSGKTISYLFPLIRHVLHQDKLRNNDGPIGIILTPTRELSIQVKNEAS 663
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/87 (45%), Positives = 52/87 (59%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F S +R ++GG Q L+RGV IV+ TPGR+ID LE+G L + + VLD
Sbjct: 93 QFVGNSGLRTLAIYGGQSIDRQMLQLKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVLD 152
Query: 424 EADRMLDMGFEPQIRKIIEQIRPDRQT 504
EAD ML MGF + KI+ Q DRQT
Sbjct: 153 EADEMLSMGFIDDVEKILSQAPQDRQT 179
Score = 41.1 bits (92), Expect = 0.029
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
+SQTG+GKT A+ LP + ++ Q + A+VL PTRELA Q+ A F
Sbjct: 46 QSQTGTGKTAAFSLPILERLDPQQKAVQ-----AIVLTPTRELAIQVHDAMAQF 94
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/81 (49%), Positives = 55/81 (67%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R+T +FGG +Q DL G EIV+AT GRL+D +++ +L + +VLDEADRMLD
Sbjct: 134 LRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLD 193
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF IRKI++ + RQTL
Sbjct: 194 MGFIDDIRKIMQMLPKQRQTL 214
Score = 39.9 bits (89), Expect = 0.066
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDG--PIA-LVLAPTRELAQQIQQ 235
+QTG+GKT A++LP++ + P+ LVL PTRELA QI Q
Sbjct: 73 AQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQ 123
Score = 32.7 bits (71), Expect = 10.0
Identities = 23/86 (26%), Positives = 45/86 (52%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+ ++KLA+D++ + + + Q + N N+ Q + +K N L
Sbjct: 211 RQT-LLFSATFSAPIRKLAQDFMNAPETVEVAA-QNTTNANVEQHIIAVDTIQKRNLLER 268
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
L+ ++ +Q I+F +TK+ +
Sbjct: 269 LIVDLHMNQ-----VIVFCKTKQSVD 289
>UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Trichomonas vaginalis G3|Rep: Type
III restriction enzyme, res subunit family protein -
Trichomonas vaginalis G3
Length = 505
Score = 82.2 bits (194), Expect = 1e-14
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +1
Query: 286 GGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 465
G K +Q L +G +++I TPGRL++FL+ T N Q CTY+V+DEADR+ + GF Q+
Sbjct: 222 GNQMKHKQQSSLMKGADVIIGTPGRLMNFLK--TVNWQFCTYVVVDEADRIFETGFLRQL 279
Query: 466 RKIIEQIRPDRQT-LSGQLLGPK 531
R I++ IRPDRQT L G L P+
Sbjct: 280 RSIMDYIRPDRQTLLFGATLPPQ 302
Score = 42.7 bits (96), Expect = 0.009
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 226
S TG+GKTL +++P + H+ Q + +GP AL+L+PT LA+Q
Sbjct: 160 SPTGTGKTLCFLIPLLYHVLAQ---GKQEGPTALILSPTELLARQ 201
Score = 32.7 bits (71), Expect = 10.0
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 9 KTMGYKEPTPIQAQGWPIAMSGKNLVGVA 95
K +PTP+QAQ PIA++G NL+ V+
Sbjct: 132 KDHSINKPTPVQAQVLPIAINGNNLIVVS 160
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/90 (44%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F SY++ V+GG R Q + RG +VIATPGRL+DF+++ + ++VLD
Sbjct: 340 KFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLD 399
Query: 424 EADRMLDMGFEPQIRKIIEQI--RPDRQTL 507
EADRMLDMGF +R+I+ + RP+ QTL
Sbjct: 400 EADRMLDMGFSEDMRRIMTHVTMRPEHQTL 429
Score = 46.0 bits (104), Expect = 0.001
Identities = 30/92 (32%), Positives = 52/92 (56%)
Frame = +3
Query: 474 H*ANTPRQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEK 653
H P +SAT+P+E++++A ++L +Y+ + IG + A ++ Q + ++ K
Sbjct: 419 HVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVG-GACSDVKQTIYEVNKYAK 477
Query: 654 ENKLNVLLQEIGQSQEPGAKTIIFVETKRKAE 749
+KL +L E Q G TI+FVETKR A+
Sbjct: 478 RSKLIEILSE----QADG--TIVFVETKRGAD 503
Score = 42.3 bits (95), Expect = 0.012
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
+QTGSGKT A++LP + + P P ++++PTRELA QI A F
Sbjct: 289 AQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKF 341
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 81.8 bits (193), Expect = 2e-14
Identities = 37/81 (45%), Positives = 52/81 (64%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+ ++GGAP +Q R L++GV++V+ATPGR I F+E G L YLVLDEAD ML+
Sbjct: 100 ITTVTLYGGAPIMDQKRALKKGVDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLN 159
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF + K+++ DR L
Sbjct: 160 MGFVEDVEKVLKASPDDRTVL 180
Score = 41.9 bits (94), Expect = 0.016
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
++QTG+GKT A+ LP + I +P +++ P AL+L PTRELA Q+ + F
Sbjct: 46 QAQTGTGKTAAFGLPIVQKI--EPGLKK---PQALILCPTRELAIQVNEEIKSF 94
>UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. RNA
SFII helicase; n=3; Cryptosporidium|Rep: Nucleolar
protein GU2. eIF4A-1-family. RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 738
Score = 81.8 bits (193), Expect = 2e-14
Identities = 32/72 (44%), Positives = 56/72 (77%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V+GG+P+ Q +++++GV+IV+ PGR++DF+E+G N+ + + L LDEAD+ML+MGF+
Sbjct: 174 VYGGSPEYPQIQEIKKGVDIVVGCPGRVLDFIERGILNVSKISVLTLDEADKMLEMGFKE 233
Query: 460 QIRKIIEQIRPD 495
+ KII+ +R +
Sbjct: 234 TVDKIIDCVRKE 245
Score = 53.6 bits (123), Expect = 5e-06
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +2
Query: 8 KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQ---PPIRRGD 178
+ G++R + Y K+ +++TG+GKTLA++LP I + + P + G
Sbjct: 80 RSRGIERLFPIQAQSFESIYGKKDVLGKAKTGTGKTLAFVLPVIERLLKKGKFDPNKHGR 139
Query: 179 GPIALVLAPTRELAQQI 229
P+ LVL PTRELAQQ+
Sbjct: 140 RPLVLVLLPTRELAQQV 156
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 81.8 bits (193), Expect = 2e-14
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F S ++ +GG Q L G I++ATPGRL+DF+EKG +LVLD
Sbjct: 295 KFSLNSILKTVVAYGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLD 354
Query: 424 EADRMLDMGFEPQIRKII--EQIRP--DRQTLSGQLLGPKK*RNLLR 552
EADRMLDMGF P I K++ E + P +RQTL P + ++L R
Sbjct: 355 EADRMLDMGFLPSIEKMVDHETMVPLGERQTLMFSATFPDEVQHLAR 401
Score = 40.3 bits (90), Expect = 0.050
Identities = 26/86 (30%), Positives = 50/86 (58%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+P EV+ LA +L +Y+ + +G + + + ++ + ++K++ L
Sbjct: 383 RQT-LMFSATFPDEVQHLARRFLNNYLFLAVGIVGGACSDVEQNFYEVAR-NKKKDLLKE 440
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
+L+ S G T++FVE K+KA+
Sbjct: 441 ILERENDSGTLGG-TLVFVEMKKKAD 465
Score = 37.5 bits (83), Expect = 0.35
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K GYK+PTP+Q PI M+G++L+ A+
Sbjct: 211 IKKSGYKKPTPVQKHALPIIMNGRDLMACAQ 241
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 81.8 bits (193), Expect = 2e-14
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
++GG Q R LER ++V+ATPGRL+D +E+GT +L LVLDEADRMLDMGF
Sbjct: 103 IYGGVAINPQIRQLERA-DVVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFID 161
Query: 460 QIRKIIEQIRPDRQTL 507
+ +II++ DRQT+
Sbjct: 162 DVEEIIDECPSDRQTM 177
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
K+ + TGSGKTLA+ I I +G+G ALVL PTRELA+Q+Q +F
Sbjct: 40 KDIIGGAATGSGKTLAFGCGII------QKIEKGNGIRALVLTPTRELAEQVQNSLKEFS 93
Query: 254 PH 259
H
Sbjct: 94 RH 95
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 81.8 bits (193), Expect = 2e-14
Identities = 40/89 (44%), Positives = 60/89 (67%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F + VR ++GG Q L+RG EI++ATPGRLID +++G+ ++ R T+LVLD
Sbjct: 91 KFAKYTKVRPVAIYGGQSMGVQLDALKRGAEILVATPGRLIDHIKRGSISIDRVTHLVLD 150
Query: 424 EADRMLDMGFEPQIRKIIEQIRPDRQTLS 510
EAD MLDMGF I+ I++ + PD + +S
Sbjct: 151 EADTMLDMGFIDDIQFILD-LTPDEKVMS 178
Score = 35.9 bits (79), Expect = 1.1
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +2
Query: 8 KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 187
+D G ++ + + ++ ++ TG+GKT AY + + I + G G
Sbjct: 18 RDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQEI------KEGGGIQ 71
Query: 188 ALVLAPTRELAQQIQQVAADFGPH 259
L++APTRELA QI + F +
Sbjct: 72 GLIVAPTRELAVQITEEVKKFAKY 95
Score = 33.1 bits (72), Expect = 7.6
Identities = 25/81 (30%), Positives = 43/81 (53%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
+SAT P E+ +L+E+YL + Q + + LS I Q + ++ EK + L ++E G
Sbjct: 180 FSATMPIEILRLSEEYLKNPKQFLLDADDLS-GEGIDQSYLVIRDREKMDYLVDFIKENG 238
Query: 690 QSQEPGAKTIIFVETKRKAEN 752
+ Q TI+F TK + +
Sbjct: 239 KGQ-----TIVFCSTKYRTRD 254
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
+ GG +Q + L+RGV+++IATPGRL+D E+G + +LV+DEADRMLDMGF P
Sbjct: 107 LIGGVSFGDQEKKLDRGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIP 166
Query: 460 QIRKIIEQIRPDRQTL 507
I +I + P +QTL
Sbjct: 167 DIERIFKMTPPKKQTL 182
Score = 42.3 bits (95), Expect = 0.012
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
+QTG+GKT A+ LP I + N R P ALV+APTRELA Q+
Sbjct: 46 AQTGTGKTAAFTLPLIDKLMNGRAKARM--PRALVIAPTRELADQV 89
Score = 33.5 bits (73), Expect = 5.7
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
V GY TPIQA P+A++G++++G+A+
Sbjct: 17 VADTGYTTATPIQAAAIPVALAGQDVLGIAQ 47
>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
magnipapillata (Hydra)
Length = 890
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/79 (46%), Positives = 51/79 (64%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F S ++ ++GG QA L G +++ATPGRL DF+++G N Q YL+LD
Sbjct: 551 KFSYNSSLKPVVLYGGVAVAHQADRLRMGCHLLVATPGRLEDFIKRGKVNFQNLKYLILD 610
Query: 424 EADRMLDMGFEPQIRKIIE 480
EAD+M+DMGF PQI IIE
Sbjct: 611 EADKMIDMGFGPQIEHIIE 629
Score = 41.5 bits (93), Expect = 0.022
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
+SAT+P +++ LA +L DY+ + +G + + ++ + ++E L LLQ G
Sbjct: 644 FSATFPDQIQHLAAQFLNDYLFLTVGRVGGTCTDVTQSVIQVSGTKKRET-LENLLQTSG 702
Query: 690 QSQEPGAKTIIFVETKRKAE 749
Q T++FVE KR A+
Sbjct: 703 TDQ-----TLVFVEKKRDAD 717
Score = 41.1 bits (92), Expect = 0.029
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQ--PPIRRG-DG---PIALVLAPTRELAQQIQQVAADF 250
+QTGSGKT +++LP I ++ N+ I DG P+A +LAPTREL Q+ A F
Sbjct: 494 AQTGSGKTASFLLPIITNLMNEGLDNIDSNIDGVALPLAAILAPTRELVVQLFTEARKF 552
>UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_158_79919_77949 - Giardia lamblia
ATCC 50803
Length = 656
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = +1
Query: 250 WTTSY---VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 420
W SY + +GG P Q L+ G +I++ATPGRL+DF+++G ++V
Sbjct: 241 WMLSYGTSILTRVAYGGDPSGPQRDALQMGCDILVATPGRLLDFIKQGVVETTYVRFVVF 300
Query: 421 DEADRMLDMGFEPQIRKIIEQIRP 492
DE DRMLDMGFEPQIR I+ ++ P
Sbjct: 301 DECDRMLDMGFEPQIRDILHELPP 324
Score = 33.9 bits (74), Expect = 4.3
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGD--YIQINIGSLQLSANHNILQIVDICQEHEKENKL 665
RQT +SAT+PKE+K LA ++L + I +G + S+N N+ Q V + + +KL
Sbjct: 343 RQT-LLFSATFPKEIKNLAMEFLRQDRLVSITVGQIG-SSNPNLAQRVVLVE--RSNDKL 398
Query: 666 NVLLQEI-GQSQE 701
+L + I GQ+ +
Sbjct: 399 RLLTEYITGQNAD 411
>UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_15_15676_17025 - Giardia lamblia
ATCC 50803
Length = 449
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V+GG REQ L++G +IVIATPGRL DFLE+ +L+ +VLDEAD+MLDMGFEP
Sbjct: 81 VYGGEGAREQRGLLKKGCDIVIATPGRLKDFLERRCLSLKYVRVMVLDEADKMLDMGFEP 140
Query: 460 QIRKII 477
QIR ++
Sbjct: 141 QIRDLV 146
Score = 35.9 bits (79), Expect = 1.1
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 11/57 (19%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINN---QPPIRRGDG--------PIALVLAPTRELAQQI 229
SQTGSGKT +++ P I + + + I D P+A++L+PTREL QQI
Sbjct: 7 SQTGSGKTFSFLSPIIAQLISSRAKDAISDDDKNMEQSMSFPLAVILSPTRELTQQI 63
>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
franciscana|Rep: VASA RNA helicase - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 726
Score = 81.4 bits (192), Expect = 2e-14
Identities = 34/78 (43%), Positives = 52/78 (66%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F + ++ V+GG R Q+ ++ G I++ TPGRLIDF+ +G N C +LVLD
Sbjct: 403 KFSYDTIIKPVVVYGGVAPRYQSDKVKSGCNILVGTPGRLIDFMNRGVFNFSACKFLVLD 462
Query: 424 EADRMLDMGFEPQIRKII 477
EADRMLDMGF +++K++
Sbjct: 463 EADRMLDMGFMGEVKKVV 480
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/80 (26%), Positives = 54/80 (67%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
+SAT+P EV++LA ++L +YI + +G++ + + ++++I + +++++ LL+ +
Sbjct: 496 FSATFPNEVQELAAEFLENYIFVTVGTVGGACMDVLQEVIEI----DAKSRIDRLLEIL- 550
Query: 690 QSQEPGAKTIIFVETKRKAE 749
+++ G KT++F +K+ A+
Sbjct: 551 -TEKEGVKTLVFASSKKTAD 569
Score = 38.7 bits (86), Expect = 0.15
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQ----PPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
+QTGSGKT AY++P I + + P A+V+ PTRELA QI + A F
Sbjct: 348 AQTGSGKTGAYLIPIINRLIEEGCAASSYDETQTPEAVVMCPTRELAIQIFKEAVKF 404
>UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep:
Vasa-like protein - Macrobrachium rosenbergii (Giant
fresh water prawn)
Length = 710
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/71 (50%), Positives = 49/71 (69%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
VR V+GG Q R++ +G IV TPGRL+D +++G L + YLVLDEADRMLD
Sbjct: 384 VRPVVVYGGVNTGFQLREISKGCNIVCGTPGRLLDVIQRGWIGLTKLRYLVLDEADRMLD 443
Query: 445 MGFEPQIRKII 477
MGFEP +R+++
Sbjct: 444 MGFEPDMRRLV 454
Score = 42.7 bits (96), Expect = 0.009
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENKLN 668
RQT +SAT+P++++KLA D+L DY+ + +G + A ++ Q ++ K +L
Sbjct: 465 RQT-LLFSATYPQDIQKLAADFLKTDYLFLAVGIVG-GACSDVEQTFVQVTKYSKREQLL 522
Query: 669 VLLQEIGQSQEPGAKTIIFVETKRKAE 749
L+ IG +T++FVETKR+A+
Sbjct: 523 DFLKTIGNE-----RTMVFVETKRQAD 544
Score = 36.3 bits (80), Expect = 0.81
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRG----DGPIALVLAPTRELAQQIQQVAADF 250
+QTGSGKT A++LP + + P A+++APTREL QI A F
Sbjct: 322 AQTGSGKTAAFLLPILQQLMADGVAASSFVELQEPEAIIVAPTRELINQIFLEARKF 378
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/74 (50%), Positives = 51/74 (68%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R + GG +QA L G EIVIATPGRL D +E+ L +CTY+V+DEAD+M+D
Sbjct: 372 LRCVSIVGGRDMNDQAYALRDGAEIVIATPGRLKDCIERHVLVLSQCTYVVMDEADKMVD 431
Query: 445 MGFEPQIRKIIEQI 486
MGFEPQ+ I++ +
Sbjct: 432 MGFEPQVNFILDSL 445
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
++TGSGKT ++++P + +I+ P + + GP AL+L PTRELAQQI+ F L
Sbjct: 311 AETGSGKTASFLIPLLAYISKLPKLDEHTKALGPQALILVPTRELAQQIETETNKFAGRL 370
Score = 39.9 bits (89), Expect = 0.066
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ +GYKEP+PIQ Q PI + ++L+G+A+
Sbjct: 282 IEEVGYKEPSPIQRQAIPIGLQNRDLIGIAE 312
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/81 (46%), Positives = 53/81 (65%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R+ VFGG R Q + L+ GV+I++ATPGRL+D + + LVLDEADRMLD
Sbjct: 125 LRSDAVFGGVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLD 184
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF I+K+IE + +RQ +
Sbjct: 185 MGFIRDIKKVIEYLPKNRQNM 205
Score = 42.7 bits (96), Expect = 0.009
Identities = 25/63 (39%), Positives = 37/63 (58%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
K+ +QTG+GKT A+ILP I + + +R +LVL PTRELA Q++ A +
Sbjct: 62 KDIMASAQTGTGKTAAFILPIIELLRAEDKPKRYQ-VHSLVLTPTRELAAQVEASAKAYT 120
Query: 254 PHL 262
+L
Sbjct: 121 KYL 123
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 81.0 bits (191), Expect = 3e-14
Identities = 35/92 (38%), Positives = 58/92 (63%)
Frame = +1
Query: 277 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 456
C++GG P +Q R L+ GV++ + TPGR+ID +++G NL ++VLDEAD+ML +GF
Sbjct: 209 CLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFA 268
Query: 457 PQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
+ I+E++ RQ++ P R+L +
Sbjct: 269 EDVEIILEKLPEKRQSMMFSATMPSWIRSLTK 300
Score = 50.4 bits (115), Expect = 5e-05
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
R++TG+GKTLA+ +P I I RG P+ LVLAPTRELA+Q+++ + P L
Sbjct: 147 RARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSL 205
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 81.0 bits (191), Expect = 3e-14
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDL-ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 441
+++ C+FGG K QAR+L ++ +V+ TPGR +D + G +L +YLVLDEADRML
Sbjct: 283 LKSVCIFGGVGKDGQARELSQKDTRVVVGTPGRTLDLADSGELDLSSVSYLVLDEADRML 342
Query: 442 DMGFEPQIRKIIEQI---RPDRQTLSGQLLGPKK*RNL 546
D GFE IR+II + RQT+ P+ R L
Sbjct: 343 DAGFENDIRRIIAHTPGHKEGRQTVMFSATWPESVRRL 380
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 8/62 (12%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPI---RRGDGPI-----ALVLAPTRELAQQIQQVAAD 247
++TGSGKTLA+ +P I ++ PP+ ++G G + LVLAPTRELAQQ + +
Sbjct: 217 AETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVPGQIQMLVLAPTRELAQQSHEHLSA 276
Query: 248 FG 253
FG
Sbjct: 277 FG 278
Score = 48.0 bits (109), Expect = 2e-04
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE-HEKE---- 656
RQT +SATWP+ V++LA +L + ++I +GS +LSAN I QIV++ +K+
Sbjct: 364 RQTVM-FSATWPESVRRLASTFLNNPLRITVGSDELSANKRIEQIVEVLDNPRDKDFRLT 422
Query: 657 NKLNVLLQEIGQSQEPGAKTIIFVETKRKAE 749
+ L L+ S+ + ++F K++A+
Sbjct: 423 HHLKAHLKVHPNSKTSPTRILVFALYKKEAQ 453
Score = 35.9 bits (79), Expect = 1.1
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
+++PTPIQA WP +S K++VG+A+
Sbjct: 193 FEKPTPIQACSWPALLSKKDVVGIAE 218
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 80.6 bits (190), Expect = 4e-14
Identities = 34/79 (43%), Positives = 53/79 (67%)
Frame = +1
Query: 271 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 450
+ C+FGG Q + + +GV++++A PGRL+D +G+ +L R LVLDEADRMLDMG
Sbjct: 110 SACIFGGVGMNPQVQAMAKGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMG 169
Query: 451 FEPQIRKIIEQIRPDRQTL 507
F ++K++ ++ RQ L
Sbjct: 170 FIHDVKKVLARLPAKRQNL 188
Score = 35.9 bits (79), Expect = 1.1
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPI---ALVLAPTRELAQQIQQVAADFGP 256
+QTG+GKT + LP + + P + GP LVL PTRELA Q+ +
Sbjct: 45 AQTGTGKTGGFALPILERLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYAR 104
Query: 257 HLMFVT 274
L F++
Sbjct: 105 DLNFIS 110
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 80.6 bits (190), Expect = 4e-14
Identities = 37/81 (45%), Positives = 52/81 (64%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R+ VFGG P Q + L GV++++ATPGRL+D +++ + LVLDEADRMLD
Sbjct: 102 LRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLD 161
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF I+KI+ + RQ L
Sbjct: 162 MGFIRDIKKILALLPAKRQNL 182
Score = 42.3 bits (95), Expect = 0.012
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
K+ +QTG+GKT + LP + ++ + G ALVL PTRELA Q+ + +G
Sbjct: 39 KDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETYG 97
Query: 254 PHL 262
+L
Sbjct: 98 KYL 100
Score = 32.7 bits (71), Expect = 10.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
V GY P+PIQAQ P ++GK+++ A+
Sbjct: 16 VTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQ 46
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 80.6 bits (190), Expect = 4e-14
Identities = 43/91 (47%), Positives = 54/91 (59%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
++GG P R QA L +G I+I TPGR+ D L KGT L+ LVLDEADRMLDMGF
Sbjct: 106 LYGGVPLRAQADSLAKGAHILIGTPGRIQDHLAKGTLTLESIKTLVLDEADRMLDMGFYE 165
Query: 460 QIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
+I KI + +QTL P K +L +
Sbjct: 166 EIIKIGSNMPKQKQTLLFSATFPPKIESLAK 196
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/52 (40%), Positives = 35/52 (67%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
K+ +S+TGSGKTLA+ +PA++ + + + P +V+ PTRELA+Q+
Sbjct: 41 KDILAQSKTGSGKTLAFGIPAVMGTD-----VKSNKPQTIVITPTRELAEQV 87
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 80.6 bits (190), Expect = 4e-14
Identities = 40/83 (48%), Positives = 50/83 (60%)
Frame = +1
Query: 286 GGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 465
GG P R Q + + G IV+ TPGR++ L K + +L LVLDEADRMLDMGF+ +I
Sbjct: 109 GGMPFRPQMKSVAHGAHIVVGTPGRILKHLNKSSLSLDHVRTLVLDEADRMLDMGFQDEI 168
Query: 466 RKIIEQIRPDRQTLSGQLLGPKK 534
II+Q RQTL PKK
Sbjct: 169 DAIIDQTNKQRQTLLFSATYPKK 191
>UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putative;
n=2; Theileria|Rep: DEAD-box family (RNA) helicase,
putative - Theileria annulata
Length = 797
Score = 80.6 bits (190), Expect = 4e-14
Identities = 40/97 (41%), Positives = 56/97 (57%)
Frame = +1
Query: 187 CFGLGAYQRVSTTNSASCCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 366
C L + ++ +F + +R ++GG+ R Q +LERG +I +ATPGRL
Sbjct: 332 CLVLSPTRELAVQTYTESRKFNFGTGIRTVVLYGGSEVRRQLIELERGCDICVATPGRLT 391
Query: 367 DFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII 477
D +E+ YLVLDEADRMLDMGF PQI+ I+
Sbjct: 392 DLVERRKIVFSCIKYLVLDEADRMLDMGFSPQIKSIL 428
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/86 (34%), Positives = 53/86 (61%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+PKE+++LA ++L DYI + +G + S N I Q + +++ K+
Sbjct: 506 RQTVM-FSATFPKEIQQLAREFLNDYIYLAVGRVG-STNEFIKQRLLYA---DQDQKIKY 560
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
L++ + + G +IFVETK++A+
Sbjct: 561 LIKLLKDNTNLGGLVLIFVETKKRAD 586
Score = 39.1 bits (87), Expect = 0.12
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 10/55 (18%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVH-INNQPPIRRGDG---------PIALVLAPTRELAQQ 226
+QTGSGKT A++LP + + PP + G P+ LVL+PTRELA Q
Sbjct: 290 AQTGSGKTAAFLLPIVTSMLRTGPPKQPSLGPLYNSRVALPVCLVLSPTRELAVQ 344
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 80.6 bits (190), Expect = 4e-14
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Frame = +1
Query: 277 CVFGGAPKREQARDLERG--VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 450
C++GG K+EQ R L + V IV+ TPGR++D G+ +L TYLVLDEADRMLD G
Sbjct: 272 CLYGGVSKQEQVRLLNQSPPVRIVVGTPGRVLDMARDGSLDLSGVTYLVLDEADRMLDKG 331
Query: 451 FEPQIRKII 477
FEP IR II
Sbjct: 332 FEPDIRAII 340
Score = 56.0 bits (129), Expect = 9e-07
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE-HEKENKLNVLLQEI 686
+SATWP V+ LAE ++ +++ +GS +LSAN + Q V++ + + KE +LN L+ +
Sbjct: 355 FSATWPPAVRGLAESFMNGPVRVTVGSDELSANRRVEQTVEVLADGYAKERRLNDFLRSV 414
Query: 687 GQSQEPGAKTIIFVETKRKAE 749
+Q K +IF K++A+
Sbjct: 415 -NAQRSKDKILIFALYKKEAQ 434
Score = 41.9 bits (94), Expect = 0.016
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPI-------RRGDGPIALVLAPTRELAQQIQQVAADF 250
++TGSGKT A+ LPA+ H+ + + +G LV+APTRELA Q ++ A
Sbjct: 203 AETGSGKTFAFGLPALQHLVTKHKVLDSGKKKAKGAQVNVLVIAPTRELAIQTEENMAKL 262
Query: 251 GPHLMFVTRVCL 286
G M + +CL
Sbjct: 263 GKS-MGIGMICL 273
Score = 37.1 bits (82), Expect = 0.46
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 12 TMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ G+ PTPIQA WP+ + K++VG+A+
Sbjct: 176 SQGFSTPTPIQACCWPVLLQNKDVVGIAE 204
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 80.2 bits (189), Expect = 5e-14
Identities = 34/81 (41%), Positives = 55/81 (67%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
++ ++G +P Q +L++ IV+ TPGR++D +EKGT +L+R YLV+DEAD ML+
Sbjct: 101 IKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLN 160
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF Q+ II+++ R T+
Sbjct: 161 MGFIDQVEAIIDELPTKRMTM 181
Score = 39.5 bits (88), Expect = 0.087
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
K+ +SQTGSGKT ++ +P + + + P ALVL PTRELA Q+++ + G
Sbjct: 42 KDLVVKSQTGSGKTASFGIPLCEMVEWEE-----NKPQALVLTPTRELAVQVKEDITNIG 96
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 80.2 bits (189), Expect = 5e-14
Identities = 38/82 (46%), Positives = 50/82 (60%)
Frame = +1
Query: 286 GGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 465
GG P R Q LE G +++ TPGR++D LE+ +L T LVLDEADRML+MGF+ +
Sbjct: 126 GGEPSRIQTNSLEHGAHVLVGTPGRVLDHLEQRNVDLSMLTTLVLDEADRMLEMGFQDSL 185
Query: 466 RKIIEQIRPDRQTLSGQLLGPK 531
I++ I RQTL PK
Sbjct: 186 NAIVKHIPKTRQTLLFSATYPK 207
Score = 37.9 bits (84), Expect = 0.27
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
R+ TGSGKT A+ L + + + P ALVL PTRELA Q+
Sbjct: 64 RADTGSGKTTAFALTLLAKLE-----AKSFSPQALVLCPTRELAHQV 105
>UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Chlorobium phaeobacteroides
BS1|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 356
Score = 80.2 bits (189), Expect = 5e-14
Identities = 35/71 (49%), Positives = 51/71 (71%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V+GGAP +Q + L+R +V+ATPGRLID L +G +L YLVLDEAD M++MGF+
Sbjct: 4 VYGGAPIDDQIQKLKRATHVVVATPGRLIDLLNRGVLSLDDLKYLVLDEADEMINMGFKA 63
Query: 460 QIRKIIEQIRP 492
+I +I++ +P
Sbjct: 64 EIDEILKSCKP 74
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 80.2 bits (189), Expect = 5e-14
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
VFGG R Q RGV+++I TPGRL+D L +LVLDEADRMLDMGF P
Sbjct: 104 VFGGVSIRPQEHAFRRGVDVLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLDMGFLP 163
Query: 460 QIRKIIEQIRPDRQTL 507
IR+I++ I RQTL
Sbjct: 164 DIRRILKHIPARRQTL 179
Score = 42.3 bits (95), Expect = 0.012
Identities = 28/84 (33%), Positives = 43/84 (51%)
Frame = +2
Query: 8 KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 187
K+ G R + + + ++ + TGSGKT A++LP + + ++P RG
Sbjct: 17 KELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQLIDRP---RGTTR- 72
Query: 188 ALVLAPTRELAQQIQQVAADFGPH 259
ALV+ PTRELA QI + D H
Sbjct: 73 ALVITPTRELAAQILEDLNDLAVH 96
Score = 33.9 bits (74), Expect = 4.3
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 95
+K +G+ PTPIQA P AMSG++++ A
Sbjct: 16 LKELGFPRPTPIQADAIPPAMSGRDVMASA 45
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/94 (41%), Positives = 58/94 (61%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R+ ++GGA Q + L +G +IV+ATPGRL+D + K +L+ LVLDEADRMLD
Sbjct: 104 IRSVAIYGGAAINPQMQSLSKGCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLD 163
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
+GF ++ I++Q + QTL P K + L
Sbjct: 164 LGFADELDDILDQTPGNVQTLLFSATFPDKVKEL 197
Score = 40.3 bits (90), Expect = 0.050
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 235
++TGSGKT ++LP + +++ P + ALVL PTRELA Q+ Q
Sbjct: 45 AETGSGKTAGFVLPLLEKLHSIPA-PGNNLTHALVLVPTRELAVQVSQ 91
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 80.2 bits (189), Expect = 5e-14
Identities = 36/81 (44%), Positives = 56/81 (69%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R+ +FGG ++ Q L++GV+I++ATPGRL+D +G +L R VLDEADRMLD
Sbjct: 101 LRSAVIFGGVGQQPQVDKLKKGVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLD 160
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF +R++++ + +QTL
Sbjct: 161 MGFLHDVRRVLKLLPAVKQTL 181
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGPHL 262
+QTG+GKT A+ P + + P R PI +L+L PTRELA QIQ+ +G HL
Sbjct: 45 AQTGTGKTCAFAAPILQRLGGDIPAGR---PIRSLILTPTRELALQIQESFEAYGKHL 99
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMG 450
V+GG+ Q + L++GVEI++ TPGR+ID L TNL R +++VLDEADR+LD+G
Sbjct: 830 VYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLG 889
Query: 451 FEPQIRKIIEQIRPDRQT 504
FE QI I+ R D+QT
Sbjct: 890 FESQIYNILRNCRKDKQT 907
Score = 64.9 bits (151), Expect = 2e-09
Identities = 26/50 (52%), Positives = 39/50 (78%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 241
++TGSGKTL+Y+ P I H+ +Q P+R DGPI+++L PTREL+ Q++ A
Sbjct: 767 AETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNEA 816
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 80.2 bits (189), Expect = 5e-14
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V+GG P Q + L RGV+I+I TPGR+ID +++ T L + +VLDEAD+MLDMGF
Sbjct: 107 VYGGQPIERQIKALSRGVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFRE 166
Query: 460 QIRKIIEQIRPDRQTL 507
I +I+ I +RQT+
Sbjct: 167 DIEEILSHIPKERQTV 182
Score = 33.9 bits (74), Expect = 4.3
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 95
++ +GY+EPTPIQ + P+ ++G ++ G A
Sbjct: 19 IRDIGYEEPTPIQQEVIPLILAGNDVAGQA 48
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 80.2 bits (189), Expect = 5e-14
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = +1
Query: 268 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 447
R V GG EQ+ + +G IV+ATPGRL+D LE+ L +CTY+V+DEADRMLDM
Sbjct: 355 RCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDM 414
Query: 448 GFEPQIRKIIEQI 486
GFE + KI+ +
Sbjct: 415 GFEDDVNKILSSL 427
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQQVAADFGPHL 262
++TGSGKT A+I+P I+ I+ PP+ + GP A+VLAPTRELAQQIQ F L
Sbjct: 293 AETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPL 352
Query: 263 MF 268
F
Sbjct: 353 GF 354
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 79.8 bits (188), Expect = 7e-14
Identities = 40/94 (42%), Positives = 55/94 (58%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
V+ ++GG Q R L GV++VI TPGR++D L + T +L + +VLDEAD MLD
Sbjct: 103 VKTIAIYGGQSIERQIRSLRFGVDVVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLD 162
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
MGF I KI++ +RQTL P + R L
Sbjct: 163 MGFIEDIEKILQNTPAERQTLLFSATMPPEIRRL 196
Score = 37.5 bits (83), Expect = 0.35
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
K+ ++QTG+GKT A+ +P + + P +R ALVL PTRELA Q+ + G
Sbjct: 44 KDVIGQAQTGTGKTAAFGVPIVERL---VPGQRAVQ--ALVLTPTRELAIQVAEEITKIG 98
Query: 254 PH 259
H
Sbjct: 99 RH 100
Score = 37.1 bits (82), Expect = 0.46
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +3
Query: 15 MGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
MG++EP+PIQAQ P + GK+++G A+
Sbjct: 24 MGFEEPSPIQAQAIPALLQGKDVIGQAQ 51
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 79.8 bits (188), Expect = 7e-14
Identities = 39/76 (51%), Positives = 50/76 (65%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V+GGAP Q R L +GV++V+ATPGR +D + +GT L +VLDEAD MLDMGF
Sbjct: 162 VYGGAPIGRQVRALVQGVDVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAE 221
Query: 460 QIRKIIEQIRPDRQTL 507
I I+EQ RQT+
Sbjct: 222 DIDAILEQAPQKRQTV 237
Score = 46.4 bits (105), Expect = 8e-04
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGPHL 262
++ TG+GKT A+ LP + + + R GD GP ALVL PTRELA Q+ + +G L
Sbjct: 100 QAATGTGKTAAFALPLLHRLTDD---RTGDHGPQALVLVPTRELAVQVSEAIHRYGRDL 155
Score = 33.9 bits (74), Expect = 4.3
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +3
Query: 15 MGYKEPTPIQAQGWPIAMSGKNLVGVA 95
+GY+EPTPIQ + P ++G++L+G A
Sbjct: 75 LGYEEPTPIQREAVPPLVAGRDLLGQA 101
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 79.8 bits (188), Expect = 7e-14
Identities = 37/76 (48%), Positives = 49/76 (64%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V+GG P R Q L+R IV+ TPGR+ID + + L+ +VLDEADRMLD+GF P
Sbjct: 108 VYGGKPLRSQMEKLKRAPHIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRP 167
Query: 460 QIRKIIEQIRPDRQTL 507
I KI+ + +RQTL
Sbjct: 168 DIEKILRRCPEERQTL 183
Score = 41.9 bits (94), Expect = 0.016
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 244
+++TG+GKT A+ +P I + + P R P AL+L PTRELA Q++ A
Sbjct: 47 QARTGTGKTAAFGIPIIERLEHGPNSRN---PQALILTPTRELAVQVRDEIA 95
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 79.8 bits (188), Expect = 7e-14
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V+GG P Q + L++GV+I+I TPGR++D +++GT +L ++LDEAD MLDMGF
Sbjct: 107 VYGGQPIDRQIKALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFRE 166
Query: 460 QIRKIIEQIRPDRQTL 507
I I+E I +RQ L
Sbjct: 167 DIEYILEDIPYERQFL 182
Score = 39.5 bits (88), Expect = 0.087
Identities = 22/75 (29%), Positives = 41/75 (54%)
Frame = +2
Query: 11 DNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 190
D G + S + K+ + ++QTG+GKT A+ +P + +I+++ + A
Sbjct: 21 DMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLENIDSE-----DNNLQA 75
Query: 191 LVLAPTRELAQQIQQ 235
++L PTRELA Q+ +
Sbjct: 76 IILCPTRELAIQVAE 90
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 79.4 bits (187), Expect = 9e-14
Identities = 35/81 (43%), Positives = 55/81 (67%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+++ +FGG ++ Q L G++I++ATPGRL+D + +G +L + VLDEADRMLD
Sbjct: 100 LKHAVIFGGVGQKPQTDALRSGIQILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLD 159
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF I++I++ + RQTL
Sbjct: 160 MGFIHDIKRILKLLPARRQTL 180
Score = 36.3 bits (80), Expect = 0.81
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVAK 98
GY PTPIQ Q PI + GK+L+G A+
Sbjct: 20 GYTSPTPIQEQSIPILLQGKDLLGCAQ 46
Score = 35.9 bits (79), Expect = 1.1
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
+QTG+GKT A+ +P + + + G ALVL PTRELA QI + +G
Sbjct: 45 AQTGTGKTAAFSIPILQKLYKTDHRK---GIKALVLTPTRELAIQIGESFEAYG 95
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 79.4 bits (187), Expect = 9e-14
Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V GG +R Q + + G +V+ATPGRL D++ + +L + LVLDEADRM+DMGF P
Sbjct: 130 VMGGTSERNQIQSIRSGARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEADRMMDMGFLP 189
Query: 460 QIRKIIEQIRPDRQTLS-GQLLGP 528
I++I+ + D+QTL +GP
Sbjct: 190 AIKRILRALPRDKQTLCFSATMGP 213
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 238
+QTG+GKTLA+I+PA+ + + P G L+L PTRELA Q+ V
Sbjct: 71 AQTGTGKTLAFIIPALEMLRDTEPC----GVQVLILVPTRELAMQVHGV 115
>UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=30;
cellular organisms|Rep: DEAD/DEAH box helicase-like
protein - Silicibacter sp. (strain TM1040)
Length = 710
Score = 79.4 bits (187), Expect = 9e-14
Identities = 39/78 (50%), Positives = 52/78 (66%)
Frame = +1
Query: 274 TCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 453
+CV GG R++ R LERG IV+ATPGRL D + +G+ +L +VLDEAD MLD+GF
Sbjct: 109 SCV-GGMDMRDERRALERGAHIVVATPGRLRDHITRGSIDLSGVAAVVLDEADEMLDLGF 167
Query: 454 EPQIRKIIEQIRPDRQTL 507
+ I+E+ DRQTL
Sbjct: 168 REDLEFILEETPEDRQTL 185
Score = 41.9 bits (94), Expect = 0.016
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 92 SQTGSGKTLAYILP-AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 235
+QTGSGKT+ + L A + R P+ALV+APTRELA Q+++
Sbjct: 46 AQTGSGKTVGFGLAIAPTILGEDGTFERAASPLALVIAPTRELALQVKR 94
>UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3;
Ostreococcus|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1025
Score = 79.4 bits (187), Expect = 9e-14
Identities = 47/107 (43%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Frame = +1
Query: 232 ASCCRFWTTSYVRNTCVFGGAPKREQARDLERGVE-IVIATPGRLIDFL-EKGTTNLQRC 405
A C +F + V+GGA EQ L IVI TPGRL D + ++G +L++
Sbjct: 133 AECEKFGAERGFHSVVVYGGASAYEQKNALRSKKPCIVIGTPGRLTDLMSQEGVLSLEKL 192
Query: 406 TYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
+ +VLDEADRMLDMGFEPQI+ I RQTL PK R L
Sbjct: 193 SVIVLDEADRMLDMGFEPQIKTIFGATPASRQTLLFSATWPKSVRKL 239
Score = 45.2 bits (102), Expect = 0.002
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGD--------YIQINIGSLQLSANHNILQIVDICQEH 647
RQT +SATWPK V+KLA YL +I +L+AN I Q ++H
Sbjct: 223 RQT-LLFSATWPKSVRKLAACYLNQDKSRVREVFIGEGAQDGELAANKAITQRFVEARDH 281
Query: 648 EKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAEN 752
EK+ L L+ E+ ++ +IF TKR+ EN
Sbjct: 282 EKDEHLYNLICELPDD----SRVVIFANTKRRVEN 312
Score = 33.9 bits (74), Expect = 4.3
Identities = 24/54 (44%), Positives = 31/54 (57%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
++TGSGKTLA+ H +++ G LV+APTRELA QIQ FG
Sbjct: 97 AKTGSGKTLAF------H-----GMKKHGGVEGLVVAPTRELAIQIQAECEKFG 139
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 79.4 bits (187), Expect = 9e-14
Identities = 36/76 (47%), Positives = 49/76 (64%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
++GG P Q R L+ V++VI TPGR+ID +++GT +L T +LDEAD+MLDMGF
Sbjct: 108 IYGGQPIERQLRALKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFRE 167
Query: 460 QIRKIIEQIRPDRQTL 507
I I DRQT+
Sbjct: 168 DIEDIFRDTPKDRQTI 183
Score = 35.5 bits (78), Expect = 1.4
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 226
K+ + ++QTG+GKT A+ +P I ++ P + ALVL+PTRELA Q
Sbjct: 43 KDVTGQAQTGTGKTAAFGIPIIERLD--PDNKNVQ---ALVLSPTRELAIQ 88
Score = 34.7 bits (76), Expect = 2.5
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 15 MGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
MG++EPTPIQA P + GK++ G A+
Sbjct: 23 MGFEEPTPIQAMAIPQILDGKDVTGQAQ 50
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 79.4 bits (187), Expect = 9e-14
Identities = 32/69 (46%), Positives = 51/69 (73%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V GG +EQA ++ G E+++ATPGRL+D +++ L +C Y+V+DEADRM+DMGFE
Sbjct: 273 VVGGYSAQEQALAVQEGAELIVATPGRLLDVIDRRLLVLNQCCYVVMDEADRMVDMGFEE 332
Query: 460 QIRKIIEQI 486
Q++K++ +
Sbjct: 333 QVQKVLASL 341
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
++TGSGKT ++++P I +I P + + +GP L+LAPTRELA QI+ A F L
Sbjct: 207 AETGSGKTASFLIPLISYICELPKLDERSKVNGPYGLILAPTRELAMQIKDEAVKFCAPL 266
Query: 263 MF 268
F
Sbjct: 267 GF 268
Score = 39.5 bits (88), Expect = 0.087
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ MGYKEPTPIQ PIA+ ++++GVA+
Sbjct: 178 ISRMGYKEPTPIQRAAIPIALGIRDVIGVAE 208
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/91 (40%), Positives = 57/91 (62%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
++GG P Q R L+ GV+IV+ TPGR++D + + + L +LVLDEAD ML+MGF
Sbjct: 108 IYGGQPIDRQIRALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFID 167
Query: 460 QIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
+ +I++ ++ DRQTL P + + L R
Sbjct: 168 DLEEIVKSLKTDRQTLLFSATMPPQIKKLAR 198
Score = 43.6 bits (98), Expect = 0.005
Identities = 27/84 (32%), Positives = 40/84 (47%)
Frame = +2
Query: 8 KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 187
KD G + + + + + ++QTG+GKT A+ INN + P
Sbjct: 20 KDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAF---GCAIINNADFSGKKKSPK 76
Query: 188 ALVLAPTRELAQQIQQVAADFGPH 259
AL+LAPTRELA Q+ + G H
Sbjct: 77 ALILAPTRELAIQVNEELVRLGKH 100
Score = 37.9 bits (84), Expect = 0.27
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAKRWPTSC 131
+K MG++EP+ IQA+ P+A+ G +++G A+ K C
Sbjct: 19 IKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGC 60
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 79.0 bits (186), Expect = 1e-13
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 YVRNT--CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADR 435
Y+R T + GG EQ L RGV+++IATPGRL+D +G L + + LV+DEADR
Sbjct: 388 YLRLTHALLIGGESMAEQRDVLNRGVDVLIATPGRLLDLFGRGGLLLTQTSTLVIDEADR 447
Query: 436 MLDMGFEPQIRKIIEQIRPDRQTL 507
MLDMGF P I KI+ + RQTL
Sbjct: 448 MLDMGFIPDIEKIVALLPAHRQTL 471
Score = 38.3 bits (85), Expect = 0.20
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
+QTG+GKT ++ LP + + R P +L+L PTRELA Q+ + +G +L
Sbjct: 335 AQTGTGKTASFTLPMLQKLAGSRA--RARMPRSLILEPTRELALQVAENFKLYGKYL 389
Score = 37.1 bits (82), Expect = 0.46
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ +GY+ PTPIQAQ P + G +++GVA+
Sbjct: 306 IEELGYEHPTPIQAQAIPEVLKGHDVLGVAQ 336
>UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10;
Streptomyces|Rep: Probable DEAD-box RNA helicase -
Streptomyces coelicolor
Length = 498
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R V GG QA L G E+V+ATPGRL D +++G L + + VLDEAD+M D
Sbjct: 169 LRLATVVGGMSIGRQASALRGGAEVVVATPGRLKDLIDRGDCRLNQVSVTVLDEADQMAD 228
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF PQ+ +++Q+RP+ Q +
Sbjct: 229 MGFMPQVTALLDQVRPEGQRM 249
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +2
Query: 44 SSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 223
++ L +S ++ R +TGSGKTLA+ L + + R P+ LVL PTRELAQ
Sbjct: 97 AATLPNSLAGRDIMGRGRTGSGKTLAFGLALLARTAGRRAEPRQ--PLGLVLVPTRELAQ 154
Query: 224 QI 229
Q+
Sbjct: 155 QV 156
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 79.0 bits (186), Expect = 1e-13
Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Frame = +1
Query: 265 VRNTCVFGG---APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADR 435
V + V+GG A +Q + L G IVIATPGRL+ L+ GT NL++ +LVLDEADR
Sbjct: 99 VSSIAVYGGGDGATWDQQRKALTDGANIVIATPGRLLAQLQSGTANLKQIKHLVLDEADR 158
Query: 436 MLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
MLDMGF I ++I + +RQT+ P K R L
Sbjct: 159 MLDMGFYDDIVRVISYLPTERQTIMFSATMPTKMRAL 195
Score = 39.9 bits (89), Expect = 0.066
Identities = 25/53 (47%), Positives = 29/53 (54%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
+QTG+GKT AY+LP + I D LVL PTRELA QI Q F
Sbjct: 45 AQTGTGKTAAYMLPILHKIIES----NTDSLDTLVLVPTRELAIQIDQQIEGF 93
Score = 34.3 bits (75), Expect = 3.3
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ +MG+ +PTPIQ + P+ MS +LV A+
Sbjct: 16 LSSMGFNKPTPIQTEAIPVIMSNSDLVACAQ 46
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 79.0 bits (186), Expect = 1e-13
Identities = 40/76 (52%), Positives = 49/76 (64%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
+ GG Q R LERG +++IATPGRL+D E+GT L LV+DEADRMLDMGF P
Sbjct: 111 LIGGVSFDHQDRKLERGADVLIATPGRLLDHFERGTLLLMGVEILVIDEADRMLDMGFIP 170
Query: 460 QIRKIIEQIRPDRQTL 507
I +I + RQTL
Sbjct: 171 DIERICKLTPFTRQTL 186
Score = 38.7 bits (86), Expect = 0.15
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
+QTG+GKT +++LP + + R P L+L PTRELA Q+++ +G
Sbjct: 50 AQTGTGKTASFVLPMLTLLEKGRAKARM--PRTLILEPTRELAAQVKENFDKYG 101
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/81 (45%), Positives = 51/81 (62%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R+ VFGG P Q + L GV++++ATPGRL+D ++ + LVLDEADRMLD
Sbjct: 102 LRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLD 161
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF I+KI+ + RQ L
Sbjct: 162 MGFIRDIKKILAMLPAKRQNL 182
Score = 42.3 bits (95), Expect = 0.012
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
K+ +QTG+GKT + LP + ++ + G ALVL PTRELA Q+ + +G
Sbjct: 39 KDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETYG 97
Query: 254 PHL 262
+L
Sbjct: 98 KYL 100
Score = 32.7 bits (71), Expect = 10.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
V GY P+PIQAQ P ++GK+++ A+
Sbjct: 16 VTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQ 46
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/79 (46%), Positives = 50/79 (63%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+++ CV+GG+ K Q + GV+IVI TPGRL D +E L +++VLDEADRMLD
Sbjct: 220 LKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLD 279
Query: 445 MGFEPQIRKIIEQIRPDRQ 501
MGFE +R I+ RQ
Sbjct: 280 MGFEEPVRFILSNTNKVRQ 298
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/81 (35%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEI 686
+SATWP +V KLA++++ + I++ IGS+ L+ANH+++QI+++ E ++ +L LL++
Sbjct: 302 FSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKY 361
Query: 687 GQSQEPGAKTIIFVETKRKAE 749
+SQ+ + ++F K +AE
Sbjct: 362 HKSQK--NRVLVFALYKVEAE 380
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI-NNQPPIRRGD---GPIALVLAPTRELAQQIQQVAADFG 253
++TGSGKTLA+ +PAI+H+ I G P LVL+PTRELA QI V + G
Sbjct: 158 AKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAG 215
Score = 36.7 bits (81), Expect = 0.61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
+++P+PIQ+ WP + G++L+G+AK
Sbjct: 134 FEKPSPIQSHTWPFLLDGRDLIGIAK 159
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/82 (43%), Positives = 51/82 (62%)
Frame = +1
Query: 262 YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 441
Y+ CV+GG Q L RGV++V+ TPGR+ID +E + L YLVLDEAD+ML
Sbjct: 206 YLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQML 265
Query: 442 DMGFEPQIRKIIEQIRPDRQTL 507
+GFE + I+E + RQ++
Sbjct: 266 AVGFEEAVESILENLPTKRQSM 287
Score = 46.8 bits (106), Expect = 6e-04
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQP----PIRR-GDGPIALVLAPTRELAQQIQQVAADFG 253
R++TG+GKTLA+ +P I + + RR G P LVLAPTRELA+Q+++ +
Sbjct: 145 RAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESA 204
Query: 254 PHLMFV 271
P+L V
Sbjct: 205 PYLSTV 210
Score = 36.7 bits (81), Expect = 0.61
Identities = 26/88 (29%), Positives = 43/88 (48%)
Frame = +3
Query: 486 TPRQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 665
T RQ+ +SAT P VKKLA YL + + I++ Q + + + + +
Sbjct: 282 TKRQSML-FSATMPTWVKKLARKYLDNPLNIDLVGDQ---DEKLAEGIKLYAIATTSTSK 337
Query: 666 NVLLQEIGQSQEPGAKTIIFVETKRKAE 749
+L ++ G KTI+F +TKR A+
Sbjct: 338 RTILSDLITVYAKGGKTIVFTQTKRDAD 365
>UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and RNA
helicases; n=1; Bifidobacterium longum DJO10A|Rep:
COG0513: Superfamily II DNA and RNA helicases -
Bifidobacterium longum DJO10A
Length = 670
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/79 (45%), Positives = 49/79 (62%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+ T V+GG Q RDL+ G +IV+A PGRL D L + L +V+DEAD M D
Sbjct: 138 MNTTTVYGGVKYIHQIRDLKAGADIVVACPGRLEDLLRQQALTLSSVEVVVIDEADEMAD 197
Query: 445 MGFEPQIRKIIEQIRPDRQ 501
MGF P +++++EQI PD Q
Sbjct: 198 MGFLPPVKRLLEQISPDAQ 216
Score = 34.3 bits (75), Expect = 3.3
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 26/88 (29%)
Frame = +2
Query: 53 LADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPI---------------------- 166
L DS ++ R +TGSGKTLA+ +P + + +
Sbjct: 41 LPDSLAGRDILGRGRTGSGKTLAFSIPLVTRLGSYDSFGEIAMEEFRKEIKRRKKASLEE 100
Query: 167 RRGDG----PIALVLAPTRELAQQIQQV 238
RR D P LVLAPTRELA QI V
Sbjct: 101 RRADDFLPHPRGLVLAPTRELANQINDV 128
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/93 (38%), Positives = 56/93 (60%)
Frame = +1
Query: 256 TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADR 435
++++ V GG K Q + + G++++IATPGRL D + G +L + +LVLDEADR
Sbjct: 186 SAHISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADR 245
Query: 436 MLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK 534
MLDMGF +++I + +RQT PK+
Sbjct: 246 MLDMGFINDVKRIAKATHAERQTALFSATMPKE 278
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/48 (54%), Positives = 31/48 (64%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 235
+QTGSGKT A+ LP + I RR AL+LAPTRELA QI+Q
Sbjct: 131 AQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQ 178
Score = 36.3 bits (80), Expect = 0.81
Identities = 27/86 (31%), Positives = 41/86 (47%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT PKE+ LAE L D +++ + +A+ I Q+V EK L+
Sbjct: 266 RQTAL-FSATMPKEIASLAERLLRDPVRVEVAPQGATAS-EITQVVHPVPTKEKRRLLSA 323
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
+L + I+F TK A+
Sbjct: 324 MLTDADM-----RSVIVFTRTKHGAD 344
Score = 33.9 bits (74), Expect = 4.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 3 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
GV+ G EP PIQ Q P + G++++G+A+
Sbjct: 101 GVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQ 132
>UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=3;
Bifidobacterium|Rep: Possible ATP-dependent RNA helicase
- Bifidobacterium longum
Length = 728
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/79 (45%), Positives = 49/79 (62%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+ T V+GG Q RDL+ G +IV+A PGRL D L + L +V+DEAD M D
Sbjct: 154 MNTTTVYGGVKYIHQIRDLKAGADIVVACPGRLEDLLRQQALTLSSVEVVVIDEADEMAD 213
Query: 445 MGFEPQIRKIIEQIRPDRQ 501
MGF P +++++EQI PD Q
Sbjct: 214 MGFLPPVKRLLEQISPDAQ 232
Score = 34.3 bits (75), Expect = 3.3
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 26/88 (29%)
Frame = +2
Query: 53 LADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPI---------------------- 166
L DS ++ R +TGSGKTLA+ +P + + +
Sbjct: 57 LPDSLAGRDILGRGRTGSGKTLAFSIPLVTRLGSYDSFGEIAMEEFRKEIKRRKKASLEE 116
Query: 167 RRGDG----PIALVLAPTRELAQQIQQV 238
RR D P LVLAPTRELA QI V
Sbjct: 117 RRADDFLPHPRGLVLAPTRELANQINDV 144
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 78.6 bits (185), Expect = 2e-13
Identities = 37/74 (50%), Positives = 48/74 (64%)
Frame = +1
Query: 286 GGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 465
GGAP Q L++GV++++ATPGRL+D + G +L LVLDEADRMLDMGF I
Sbjct: 152 GGAPYNGQITALKKGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDI 211
Query: 466 RKIIEQIRPDRQTL 507
I+ DRQT+
Sbjct: 212 SDILRAAPIDRQTI 225
Score = 41.1 bits (92), Expect = 0.029
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
+QTGSGKT A+++P + ++ + AL+L PTRELAQQ+
Sbjct: 88 AQTGSGKTAAFVIPVLDRLSRATSFDKLTK--ALILTPTRELAQQV 131
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 78.6 bits (185), Expect = 2e-13
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V+GG +QA+ L +GV+I++ TPGR++D E+G +L L LDEADRMLDMGF P
Sbjct: 106 VYGGTDLEKQAKTLAKGVDIIVGTPGRVMDMNERGHIDLNSPKMLCLDEADRMLDMGFFP 165
Query: 460 QIRKIIEQIRPDRQTL 507
I I+E++ +QTL
Sbjct: 166 DIMWIVERMTSRQQTL 181
Score = 37.9 bits (84), Expect = 0.27
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 235
+++TGSGKT A+ LP + ++ ALVLAPTRELA Q+ Q
Sbjct: 48 QARTGSGKTAAFGLPILERCQPSGKLQ------ALVLAPTRELANQVAQ 90
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 78.6 bits (185), Expect = 2e-13
Identities = 38/76 (50%), Positives = 48/76 (63%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V+GGA Q L RGV++V+ TPGRLID LE+G +L Y VLDEAD ML +GF
Sbjct: 108 VYGGAAYGPQENALRRGVDVVVGTPGRLIDHLERGNLDLSAIQYAVLDEADEMLSVGFAD 167
Query: 460 QIRKIIEQIRPDRQTL 507
I I++Q RQT+
Sbjct: 168 AIETILQQTPAARQTM 183
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = +2
Query: 2 RCKDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHI---NNQPPIRR 172
R + G+ + L + K+ R++TG+GKTLA+ LP I ++ + + R
Sbjct: 14 RLAERGITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPIIQNLTAPDGRGSRER 73
Query: 173 GDGPIALVLAPTRELAQQIQQVAADFGPHLMFVT 274
G P A+V+APTRELA+Q+ + + GP L VT
Sbjct: 74 GRLPRAIVIAPTRELAKQVAEEFSKSGPQLSTVT 107
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 78.6 bits (185), Expect = 2e-13
Identities = 40/102 (39%), Positives = 59/102 (57%)
Frame = +1
Query: 247 FWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 426
F S+++ + GG Q + ERG ++++ATPGRLID L++ L +LVLDE
Sbjct: 167 FTEGSHLKLQVIVGGVAIGPQIKRAERGADLIVATPGRLIDLLDRKALRLSETRFLVLDE 226
Query: 427 ADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
AD+MLD+GF +RKI + +RQT+ PK+ L R
Sbjct: 227 ADQMLDLGFIHALRKIAPLLPAERQTMLFSATMPKQMEELSR 268
Score = 37.9 bits (84), Expect = 0.27
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +2
Query: 92 SQTGSGKTLAYILP---AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF--GP 256
+QTG+GKT A+ LP A++ +P R G L+LAPTREL QI + F G
Sbjct: 115 AQTGTGKTAAFGLPLLDALMKAGTKPAPRTCRG---LILAPTRELVSQICESLRAFTEGS 171
Query: 257 HL 262
HL
Sbjct: 172 HL 173
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 78.6 bits (185), Expect = 2e-13
Identities = 35/86 (40%), Positives = 52/86 (60%)
Frame = +1
Query: 247 FWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 426
F T + CV+GG P +Q L RGV+IV+ TPGR++D + + +L ++VLDE
Sbjct: 122 FITAPTLDTACVYGGTPIGQQESKLRRGVDIVVGTPGRIMDLMNRRALDLSEIEFVVLDE 181
Query: 427 ADRMLDMGFEPQIRKIIEQIRPDRQT 504
AD+ML++GFE + I+ RQT
Sbjct: 182 ADQMLNVGFEEDVEAILHDCPAGRQT 207
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHI--NNQPPIRRG-DGPIALVLAPTRELAQQIQ 232
R++TG+GKTLA+ LP I + N + RG P +VLAPTRELA+Q++
Sbjct: 68 RARTGTGKTLAFSLPVIEKLLSNGRGSGGRGYRNPKCIVLAPTRELAKQVE 118
>UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 580
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
+ GG E + GV IV+ATPGRLID LE+G NL C + +DEAD+M+DMGFE
Sbjct: 271 IIGGHQYEETVHSVRNGVHIVVATPGRLIDSLERGIINLSNCYFFTMDEADKMIDMGFEK 330
Query: 460 QIRKIIEQIRPDRQ---TLSGQLLGPKK 534
++ I+ + + T+ G++ KK
Sbjct: 331 SLQSILNYLPASEKLETTIDGKIFNIKK 358
Score = 41.9 bits (94), Expect = 0.016
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINN---------QPPIRRGDGPIALVLAPTRELAQQIQQVAA 244
++TGSGKTLA++LP +I + + P+ L+LAPTRELA QI + A
Sbjct: 199 AETGSGKTLAFLLPLFSYILSVDSNYLLYEHQQESNFNKPLGLILAPTRELALQITKEAK 258
Query: 245 DFGPHL 262
FG L
Sbjct: 259 LFGDKL 264
Score = 40.3 bits (90), Expect = 0.050
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K +GY PTPIQ P+A++G+++VG+A+
Sbjct: 170 IKNLGYDSPTPIQRASIPLALNGRDIVGIAE 200
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
++ T VFG + +Q +L++ IV+ TPGR++D +EKGT L R +YLV+DEAD ML+
Sbjct: 99 IKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLN 158
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF Q+ II+ + +R T+
Sbjct: 159 MGFIEQVEAIIKHLPTERTTM 179
Score = 39.1 bits (87), Expect = 0.12
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
K+ +SQTGSGKT ++ +P + + N + P AL+L PTRELA Q+++ + G
Sbjct: 40 KDLVVKSQTGSGKTASFGIP-LCELANWDENK----PQALILTPTRELAVQVKEDITNIG 94
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 78.6 bits (185), Expect = 2e-13
Identities = 39/72 (54%), Positives = 48/72 (66%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V+GGAPK EQAR + ++I TPGRL+D + G+ + + YLVLDEADRMLD GFE
Sbjct: 270 VYGGAPKSEQAR-AAKNASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQ 328
Query: 460 QIRKIIEQIRPD 495
IR II PD
Sbjct: 329 DIRNIISH-TPD 339
Score = 63.3 bits (147), Expect = 6e-09
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +3
Query: 483 NTPRQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE-HEKEN 659
N RQT F +SATWP+ V+ LA +L D ++I IGS +L+A+ NI QIV+I + KE
Sbjct: 343 NGSRQTVF-FSATWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKER 401
Query: 660 KLNVLLQEIGQSQEPGAKTIIFVETKRKA 746
L+ LL++ S K +IFV K++A
Sbjct: 402 MLDNLLRKHLSSGGKDDKILIFVLYKKEA 430
Score = 41.5 bits (93), Expect = 0.022
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
YKEPTPIQA WP ++G+++VG+A+
Sbjct: 185 YKEPTPIQAATWPYLLAGRDVVGIAE 210
Score = 38.7 bits (86), Expect = 0.15
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 226
++TGSGKT+A+ +PA+ ++N + P LV++PTRELA Q
Sbjct: 209 AETGSGKTVAFGIPALQYLNGLSDNK--SVPRVLVVSPTRELAIQ 251
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/77 (48%), Positives = 49/77 (63%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
VR ++GGA R Q ++RG IV+ATPGRL+DFLE+ LQ +VLDEAD ML
Sbjct: 142 VRVVTIYGGASYRTQIDGIKRGAHIVVATPGRLVDFLEQKMIKLQSVKTVVLDEADEMLS 201
Query: 445 MGFEPQIRKIIEQIRPD 495
MGF+ + I+ +PD
Sbjct: 202 MGFKEALETILSATQPD 218
Score = 35.5 bits (78), Expect = 1.4
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2
Query: 77 EFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 235
+F + TG+GKT A+ +P I +I++ + ALVL+PTRELA Q+ +
Sbjct: 84 DFIGLASTGTGKTAAFGIPLIENIDSTVKDTQ-----ALVLSPTRELALQVAE 131
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/81 (43%), Positives = 52/81 (64%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
++ V+GG ++ Q +E G++I++ATPGRL+D +E G N + VLDEAD MLD
Sbjct: 104 LKTKVVYGGVGRQAQVDSIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLD 163
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF ++ II ++ RQTL
Sbjct: 164 MGFFKDVQSIISKLPKSRQTL 184
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
+QTG+GKT A+ LP I + +L+L PTRELA QI Q D+ L
Sbjct: 46 AQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLK 105
Query: 272 TRV 280
T+V
Sbjct: 106 TKV 108
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
V GYK+PTPIQ + P ++G +L+G+A+
Sbjct: 17 VNLKGYKQPTPIQKECIPALINGNDLLGIAQ 47
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/104 (34%), Positives = 61/104 (58%)
Frame = +1
Query: 196 LGAYQRVSTTNSASCCRFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 375
L + ++T + S + +R +FGG + Q R LE+G++I++ATPGRL+D +
Sbjct: 81 LAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLEKGIDILVATPGRLLDLI 140
Query: 376 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 507
+G +L + VLDE D+MLDMG +++II + +RQ +
Sbjct: 141 NQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYLPRERQNM 184
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGPHLMF 268
+QTG+GKT A+ +P + + + +G I ALVLAPTRELA QI + +G +L
Sbjct: 45 AQTGTGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPTRELATQIAESFTAYGVNLPL 104
Query: 269 VTRV 280
T V
Sbjct: 105 RTLV 108
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/86 (44%), Positives = 53/86 (61%)
Frame = +1
Query: 274 TCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 453
TCV GG R++ R LERG IV+ TPGRL+D + +G+ + +VLDEAD MLD+GF
Sbjct: 108 TCV-GGMDMRDERRALERGAHIVVGTPGRLVDHINRGSFDTSAIRAVVLDEADEMLDLGF 166
Query: 454 EPQIRKIIEQIRPDRQTLSGQLLGPK 531
++ I+E +R+TL PK
Sbjct: 167 REELELILEDTPKERRTLMFSATVPK 192
Score = 35.1 bits (77), Expect = 1.9
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQI 229
++TGSGKT+A+ L + + R P+ L++APTRELA Q+
Sbjct: 44 ARTGSGKTVAFGLAIANELLGGEDTFLIRAATPLGLIIAPTRELALQV 91
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/78 (47%), Positives = 52/78 (66%)
Frame = +1
Query: 274 TCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 453
+C+ GG R +A+ LERG IV+ TPGRL D L +G NL R +VLDEAD MLD+GF
Sbjct: 150 SCI-GGMDARREAQALERGCHIVVGTPGRLCDHLGRGRLNLSRLRAVVLDEADEMLDLGF 208
Query: 454 EPQIRKIIEQIRPDRQTL 507
++ +I++ +R+TL
Sbjct: 209 RDELEEILDATPAERRTL 226
Score = 46.4 bits (105), Expect = 8e-04
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +2
Query: 92 SQTGSGKTLAYILP-AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 235
+QTGSGKT+AY L A + + + P+AL++APTRELA Q+QQ
Sbjct: 87 AQTGSGKTVAYGLALADTLLGADERLGQAGAPLALIVAPTRELAMQVQQ 135
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/89 (44%), Positives = 55/89 (61%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V GGA QAR +E GV++++ATPGRL+D + G L +VLDEAD+MLD+GF P
Sbjct: 164 VIGGAKPGPQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIP 223
Query: 460 QIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
IR+I+ ++ RQ + PK R L
Sbjct: 224 AIRQIMAKLPRQRQAVMFSATMPKPIRAL 252
Score = 50.8 bits (116), Expect = 4e-05
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLM 265
+QTG+GKT A++LP + I N P R ALVLAPTRELA QI A +G
Sbjct: 101 AQTGTGKTAAFVLPILHRIAANRARPAPRACR--ALVLAPTRELATQIADAARTYGK--- 155
Query: 266 FVTRVCLVVLLKESKPG 316
TR + V++ +KPG
Sbjct: 156 -FTRPSVAVVIGGAKPG 171
Score = 35.5 bits (78), Expect = 1.4
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ Y+ PTPIQA+ P+ + G +LVG+A+
Sbjct: 72 ISEQSYETPTPIQARSIPVMLEGHDLVGIAQ 102
>UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1;
Ostreococcus tauri|Rep: DEAD/DEAH box RNA helicase -
Ostreococcus tauri
Length = 507
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/62 (62%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +1
Query: 268 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLE-KGTTNLQRCTYLVLDEADRMLD 444
R +FGGA K EQ + L G EIV+ATPGRLID L K + +L+R TYL LDEADRMLD
Sbjct: 207 RCCAIFGGASKHEQLKRLRAGAEIVVATPGRLIDVLHVKNSIDLRRVTYLALDEADRMLD 266
Query: 445 MG 450
MG
Sbjct: 267 MG 268
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +2
Query: 98 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
TGSGKTLA++LPA I+ Q P+R+ +GP+ALVLAPTRELA QI A F
Sbjct: 149 TGSGKTLAFLLPAYAQISRQRPLRKKEGPMALVLAPTRELATQIANEANAF 199
>UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 566
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Frame = +1
Query: 238 CCRFWTTSYVRNTCVFG--GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 411
C +F + C+ G G Q + + GV IVI TPGR+ D + K N+ C +
Sbjct: 217 CQKFQKKGFPAIHCLLGIGGMDMSSQLQSIRNGVHIVIGTPGRISDMVNKKKINMDLCRF 276
Query: 412 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK 534
+VLDEADRMLD FE +IR I+E RQT+ PKK
Sbjct: 277 IVLDEADRMLDQVFELEIRNILEHFTGPRQTMLFSATLPKK 317
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = +2
Query: 98 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF 250
+G GKTL ++LPA++ + P+ RG+GP AL+L P+ ELA ++A +
Sbjct: 163 SGQGKTLVFLLPALLQCIEEEMKMPVIRGEGPFALILLPSHELAILTYELAKQY 216
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 15 MGYKEPTPIQAQGWPIAMSGKNLVGVA 95
M K+PTPIQ QG P + G++++GVA
Sbjct: 135 MKIKKPTPIQMQGLPAVLMGRDIIGVA 161
Score = 32.7 bits (71), Expect = 10.0
Identities = 26/88 (29%), Positives = 47/88 (53%)
Frame = +3
Query: 489 PRQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLN 668
PRQT +SAT PK++++ + L D + IN+G N N++Q + ++ E KL+
Sbjct: 304 PRQTML-FSATLPKKIQEFTKQTLVDPLVINVGR-SGQINLNVIQEILYVKQ---EEKLH 358
Query: 669 VLLQEIGQSQEPGAKTIIFVETKRKAEN 752
LL + ++ P +IF E + ++
Sbjct: 359 YLLDCLKKTTPP---VVIFSEHQNDVDD 383
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = +1
Query: 259 SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRM 438
S +R V+GG +Q + RG I++ TPGR +D +++G N + +Y VLDEAD M
Sbjct: 96 SGIRTVVVYGGVSINKQIELILRGANIIVGTPGRTLDLIDRGILNFDKVSYFVLDEADEM 155
Query: 439 LDMGFEPQIRKIIEQIRPDRQT 504
LDMGF I+KII + +RQ+
Sbjct: 156 LDMGFIEDIKKIINVLPVERQS 177
Score = 46.4 bits (105), Expect = 8e-04
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
RS+TGSGKT AY++P I + + IR AL+L PTRELA Q+ +V+ G
Sbjct: 45 RSKTGSGKTAAYLIPIINNTAKEKGIR------ALILLPTRELAVQVAKVSEALG 93
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/81 (45%), Positives = 52/81 (64%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
V+ V+GG Q L RGV +++ATPGRLID +E+GT +L + +VLDEAD ML+
Sbjct: 100 VKVLAVYGGQSIGNQIAQLRRGVHVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLN 159
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF I +I+ + RQT+
Sbjct: 160 MGFIDDIERILSHVPERRQTM 180
Score = 36.3 bits (80), Expect = 0.81
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
+QTG+GKT A+ +P + ++ + P AL++ PTREL Q+ + G ++
Sbjct: 48 AQTGTGKTAAFAIPVLENLEAERV------PQALIICPTRELCLQVSEEIKRIGKYM 98
>UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 44; n=1; Arabidopsis thaliana|Rep: Putative
DEAD-box ATP-dependent RNA helicase 44 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 622
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/59 (59%), Positives = 46/59 (77%)
Frame = +1
Query: 304 EQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE 480
+QA L +G EIVIATPGRL+D LE+ L +C YLVLDEADRM+DM FEPQ+ ++++
Sbjct: 328 KQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLD 386
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
S TGSGKT A++LP + +I+ PP+R + +GP ALV+ PTRELA QI++ F +L
Sbjct: 254 SATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETVKFSRYL 313
Query: 263 MF 268
F
Sbjct: 314 GF 315
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R ++GG Q + L++GV++VI TPGR+ID L + T L ++LDEAD MLD
Sbjct: 102 IRTLPIYGGQSIVHQIKALKQGVQVVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLD 161
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF I I+ Q++ +RQTL
Sbjct: 162 MGFIDDIESILRQVKNERQTL 182
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
++QTG+GKT A+ +P + ++ ++ AL+L PTRELA Q+
Sbjct: 49 QAQTGTGKTAAFGIPVVEKVSTGRHVQ------ALILTPTRELAIQV 89
Score = 33.1 bits (72), Expect = 7.6
Identities = 12/28 (42%), Positives = 22/28 (78%)
Frame = +3
Query: 15 MGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
MG++EP+PIQA+ P ++G +++G A+
Sbjct: 24 MGFEEPSPIQAKAIPAILAGGDVIGQAQ 51
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = +1
Query: 286 GGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 465
GG Q R LE G ++V+ TPGR+ D L++GT +VLDEADRMLD+GF PQI
Sbjct: 150 GGKNMNRQLRQLENGTQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLDIGFRPQI 209
Query: 466 RKIIEQIRPDRQTL 507
+I+ + +RQTL
Sbjct: 210 ERIMRKCPRNRQTL 223
Score = 40.3 bits (90), Expect = 0.050
Identities = 22/74 (29%), Positives = 40/74 (54%)
Frame = +2
Query: 8 KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 187
KD G ++ + + K+ +++TG+GKT A+ +P + +++ R P
Sbjct: 60 KDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPILEQLDSLEDCR---DPQ 116
Query: 188 ALVLAPTRELAQQI 229
A+V+ PTRELA Q+
Sbjct: 117 AIVIVPTRELADQV 130
Score = 32.7 bits (71), Expect = 10.0
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
VK G+ P+PIQA P A++GK+++G A+
Sbjct: 59 VKDAGFTTPSPIQAALIPHALNGKDVIGQAR 89
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 77.8 bits (183), Expect = 3e-13
Identities = 37/81 (45%), Positives = 51/81 (62%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
V+ VFGG Q +L G +IV+ATPGRL+D LE + + LVLDEADR+LD
Sbjct: 108 VKVAVVFGGVSINPQMMNLRGGADIVVATPGRLLDLLEHNALKISEVSTLVLDEADRLLD 167
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
+GF ++ +I+E + P RQ L
Sbjct: 168 LGFGEELGRILELLPPRRQNL 188
Score = 48.0 bits (109), Expect = 2e-04
Identities = 30/93 (32%), Positives = 45/93 (48%)
Frame = +2
Query: 11 DNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 190
D G + A S + + ++ +QTGSGKT A+ LP + + N P
Sbjct: 22 DKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLAN-APTGTPRPTRG 80
Query: 191 LVLAPTRELAQQIQQVAADFGPHLMFVTRVCLV 289
L+L PTRELA Q+ + A F +L +V +V
Sbjct: 81 LILVPTRELAAQVGEAIAGFAKYLPQRVKVAVV 113
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 77.8 bits (183), Expect = 3e-13
Identities = 37/94 (39%), Positives = 57/94 (60%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R ++GG +Q R L GV++V+A PGRL+D + +GT ++ L++DEADRM D
Sbjct: 99 IRECSIYGGVNMDQQIRRLRSGVDVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFD 158
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
MGF+P I+ I++ + QTL P + R L
Sbjct: 159 MGFQPDIQSILKCLVQPHQTLLFSATMPPEVRKL 192
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +3
Query: 3 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
GV+ GYKEPTPIQAQ P M+G +++G+A+
Sbjct: 15 GVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQ 46
Score = 39.5 bits (88), Expect = 0.087
Identities = 26/54 (48%), Positives = 31/54 (57%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
+QTG+GKT AY LP I + + P RG LV+APTRELA QI G
Sbjct: 45 AQTGTGKTAAYALPIIQKMLSTP---RG-RVRTLVIAPTRELACQISDSFRSLG 94
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 77.8 bits (183), Expect = 3e-13
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = +1
Query: 268 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 447
R + GG +QA + +G EI+IATPGRL D LEK L +C Y+VLDEAD M+D+
Sbjct: 519 RVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADMMIDL 578
Query: 448 GFEPQIRKIIE 480
GFEPQ+ +++
Sbjct: 579 GFEPQVTSVLD 589
Score = 66.1 bits (154), Expect = 9e-10
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAADFGPHL 262
++TGSGKT A+++P +++I+ QP + + DGP ALV+APTREL QQI++ +F H
Sbjct: 457 AETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHF 516
Query: 263 MF 268
F
Sbjct: 517 GF 518
Score = 39.1 bits (87), Expect = 0.12
Identities = 12/31 (38%), Positives = 27/31 (87%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ +GY++P+PIQ Q PI+++G++++G+A+
Sbjct: 428 IRQLGYEKPSPIQMQSIPISLTGRDILGIAE 458
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 77.8 bits (183), Expect = 3e-13
Identities = 35/73 (47%), Positives = 50/73 (68%)
Frame = +1
Query: 268 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 447
R+ V GG QA +L +G EI+I TPGR+ D L++ T L +C Y++LDEADRM+DM
Sbjct: 445 RSVAVVGGRNAESQAFELRKGCEIIIGTPGRVKDCLDRAYTVLSQCNYVILDEADRMIDM 504
Query: 448 GFEPQIRKIIEQI 486
GFE ++ I++ I
Sbjct: 505 GFEDVLKYILDCI 517
Score = 53.2 bits (122), Expect = 7e-06
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = +2
Query: 98 TGSGKTLAYILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQIQQVAADF 250
TGSGKT A++LP + ++ PP+ DGP AL+LAP+RELA QI F
Sbjct: 385 TGSGKTAAFVLPMLTYVKKLPPLDDETSLDGPYALILAPSRELALQIYDETVKF 438
Score = 37.5 bits (83), Expect = 0.35
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 95
+K GY +PTPIQ Q PIA+ ++L+G+A
Sbjct: 354 IKKAGYIKPTPIQMQAIPIALEMRDLIGIA 383
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 77.8 bits (183), Expect = 3e-13
Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Frame = +1
Query: 286 GGAPKREQARDLE-RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 462
GG +Q + LE R +I++ATPGRL+DF ++G +L +VLDEADRMLDMGF PQ
Sbjct: 120 GGMDFDKQLKALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQ 179
Query: 463 IRKIIEQIRP--DRQTL 507
+R+II Q P +RQTL
Sbjct: 180 VRQIIRQTPPKSERQTL 196
Score = 46.4 bits (105), Expect = 8e-04
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIR-RGDG-PIALVLAPTRELAQQIQQVAA 244
R+QTG+GKT A+++ I + PP + R G P AL++APTREL QI + AA
Sbjct: 52 RAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAA 105
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 77.8 bits (183), Expect = 3e-13
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Frame = +1
Query: 277 CVFGGAPKREQARDLER--GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 450
C+FGG+ K EQ L + GV+I+ ATPGRL DFL +G+ +L ++ VLDEADRMLD G
Sbjct: 290 CIFGGSDKNEQRNLLYKNNGVDIITATPGRLKDFLSEGSISLANVSFAVLDEADRMLDRG 349
Query: 451 FEPQIRKIIEQIRP--DRQTL 507
F I+ I+ P RQTL
Sbjct: 350 FSEDIKLILSGCPPKEQRQTL 370
Score = 44.8 bits (101), Expect = 0.002
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINI-------------GSLQLSANHNILQIVD 632
RQT ++ATWP +++KLAE Y+ + Q+ I G+++L AN I Q V+
Sbjct: 367 RQT-LMFTATWPLDIQKLAESYMINPAQVTIGHRTRAGGDGEGNGNIELQANSRIEQKVE 425
Query: 633 ICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKA 746
+ KE +L LL+E + + + ++F K++A
Sbjct: 426 VVDPRGKEFRLYELLKEAQKGSQKDDRILVFCLYKKEA 463
Score = 40.7 bits (91), Expect = 0.038
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIR-----RGDGPIALVLAPTRELAQQIQQVAADFGP 256
++TGSGKT+A+ LP + + ++P + R P A++++PTRELA Q +
Sbjct: 223 AETGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRELAMQTHAALSGLA- 281
Query: 257 HLMFVTRVCL 286
L+ ++ VC+
Sbjct: 282 SLVGLSAVCI 291
Score = 38.7 bits (86), Expect = 0.15
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
Y PTPIQ+ WP ++SG++++G+A+
Sbjct: 199 YTNPTPIQSASWPFSLSGRDVIGIAE 224
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 77.4 bits (182), Expect = 4e-13
Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 4/105 (3%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F S ++ ++GG Q + + +GV+I++ATPGRL+D + KG ++VLD
Sbjct: 403 KFSKDSVLKCHIIYGGTSTSHQMKQIFQGVDILVATPGRLLDLVGKGKITFDAIEFVVLD 462
Query: 424 EADRMLDMGFEPQIRKII--EQIRP--DRQTLSGQLLGPKK*RNL 546
EADRMLDMGF P + K++ + ++P +RQTL P++ + L
Sbjct: 463 EADRMLDMGFLPDVEKVLRHDTMKPPGERQTLMFSATFPQEIQQL 507
Score = 41.9 bits (94), Expect = 0.016
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT+P+E+++LA +L +Y+ + +G + SA +I Q ++ +K KL
Sbjct: 491 RQT-LMFSATFPQEIQQLAAKFLNNYVFVTVGIVG-SACTDIEQSFFEVKKSDKRTKLKE 548
Query: 672 LL-QEIGQSQEPGAKTIIFVETKRKAE 749
LL +EI Q+ G ++FV K+ A+
Sbjct: 549 LLNEEIEQNMLNG--ILVFVSEKKTAD 573
Score = 36.7 bits (81), Expect = 0.61
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K GY +PTP+Q G PI +SG++L+ A+
Sbjct: 317 IKKSGYTKPTPVQKYGIPILLSGRDLMACAQ 347
Score = 34.7 bits (76), Expect = 2.5
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 8/61 (13%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVH--------INNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 247
+QTGSGKT A+++P I+H +++ + + P AL+++PTREL QI A
Sbjct: 346 AQTGSGKTAAFLIP-IIHTLLAKDRDLSDMSSANQVE-PRALIISPTRELTIQIFDEARK 403
Query: 248 F 250
F
Sbjct: 404 F 404
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 77.4 bits (182), Expect = 4e-13
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
++GG QA+ L++G +I++ATPGRL++ + +L +LVLDEADRMLDMGF
Sbjct: 108 IYGGMKMATQAQKLKQGADIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFST 167
Query: 460 QIRKIIEQIRPDRQTL 507
I+KI++ + RQ L
Sbjct: 168 DIQKILQAVNKKRQNL 183
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
+QTG+GKT A+ LP + ++ +P + AL+L PTRELA Q+ + + H+
Sbjct: 45 AQTGTGKTAAFALPILQKMHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHM 101
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 77.4 bits (182), Expect = 4e-13
Identities = 37/91 (40%), Positives = 55/91 (60%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V+GG Q R L+R V++V+ TPGR+ID L +GT ++ + YLV+DEAD MLDMGF
Sbjct: 105 VYGGVSIGNQIRALKRRVDLVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIE 164
Query: 460 QIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
+ I+ + ++Q L P++ L R
Sbjct: 165 DVEMILSKTNKEKQILMFSATMPQRIVTLAR 195
Score = 36.3 bits (80), Expect = 0.81
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
++QTG+GKT A+ +P I ++ + + ALVL PTRELA Q+
Sbjct: 46 QAQTGTGKTAAFGIPLIERLDE-----KANDVQALVLTPTRELALQV 87
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 77.4 bits (182), Expect = 4e-13
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +1
Query: 244 RFWTTSYVRNTCV-FGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 420
R ++ S V CV +GGA Q + + G I++ATPGRL+DFLEKG YLVL
Sbjct: 359 RKFSHSSVAKCCVAYGGAAGFHQLKTIHSGCHILVATPGRLLDFLEKGKIVFSSLKYLVL 418
Query: 421 DEADRMLDMGFEPQIRKII 477
DEADRMLDMGF I+ +I
Sbjct: 419 DEADRMLDMGFLSSIKTVI 437
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI--NNQP--PIRRGDGPIALVLAPTRELAQQIQQVAADF 250
+QTGSGKT A++LP + +I NN P P LV+ PTRELA QI + A F
Sbjct: 305 AQTGSGKTAAFLLPMLHYILDNNCPSNAFEEPAQPTGLVICPTRELAIQIMREARKF 361
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 77.4 bits (182), Expect = 4e-13
Identities = 35/66 (53%), Positives = 45/66 (68%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V GG P Q L G ++V+ATPGRL+D ++G L + TYLV+DEADRML MG E
Sbjct: 147 VCGGVPVSTQTIALREGADVVVATPGRLLDLCKRGALCLDKITYLVMDEADRMLGMGMEE 206
Query: 460 QIRKII 477
Q+RKI+
Sbjct: 207 QLRKIV 212
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
++TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 84 AETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 129
Score = 32.7 bits (71), Expect = 10.0
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAKRVPAKRWPTSCQPLC 143
++ PTPIQ Q MSG++++G+A+ K S PLC
Sbjct: 60 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSL-PLC 99
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 77.4 bits (182), Expect = 4e-13
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVLDEADRM 438
VR+TC+ GG +QARDL R I+IATPGRL+D LE KG +L++ +LV+DEADR+
Sbjct: 178 VRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKG-FSLRKLKFLVMDEADRL 236
Query: 439 LDMGFEPQIRKIIEQIRPDRQT 504
LDM F P + +I++ I +T
Sbjct: 237 LDMEFGPVLDRILKIIPTQERT 258
Score = 46.4 bits (105), Expect = 8e-04
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +2
Query: 5 CKDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHI-NNQPPIRRGDG 181
CK+ + S + + + +QTGSGKT A+ +P + + ++Q P
Sbjct: 96 CKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPY----- 150
Query: 182 PIALVLAPTRELAQQIQQVAADFGPHLMFVTRVCLV 289
A +LAPTRELAQQI++ G LM V C+V
Sbjct: 151 -YACILAPTRELAQQIKETFDSLG-SLMGVRSTCIV 184
Score = 34.3 bits (75), Expect = 3.3
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 9 KTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
K + Y +PTPIQ++ P A+ G +++G+A+
Sbjct: 97 KNLNYSKPTPIQSKAIPPALEGHDIIGLAQ 126
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=16; Pezizomycotina|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Coccidioides immitis
Length = 817
Score = 77.4 bits (182), Expect = 4e-13
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
+ GG EQ+ L G EI+IATPGRL+D +E+ L +C Y+++DEADRM+D+GFE
Sbjct: 489 IVGGHSLEEQSFSLRNGAEIIIATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEE 548
Query: 460 QIRKIIEQI 486
+ KI++ +
Sbjct: 549 PVNKILDAL 557
Score = 60.1 bits (139), Expect = 6e-08
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 5/56 (8%)
Frame = +2
Query: 98 TGSGKTLAYILPAIVHINNQPPI-----RRGDGPIALVLAPTRELAQQIQQVAADF 250
TGSGKT A++LP +V+I P + R+ DGP A++LAPTRELAQQI+ A F
Sbjct: 423 TGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENEARKF 478
Score = 37.1 bits (82), Expect = 0.46
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 95
+ +GYK+P+PIQ PIA+ ++L+GVA
Sbjct: 392 IDKVGYKDPSPIQRAAIPIALQNRDLIGVA 421
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 77.0 bits (181), Expect = 5e-13
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V+GG+ Q R L+RGV I++ATPGRL+D +E+ T +L +V+DEAD ML+MGF
Sbjct: 106 VYGGSSIDSQIRSLKRGVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLNMGFTD 165
Query: 460 QIRKIIEQIRPDRQTL 507
I I+ + +R TL
Sbjct: 166 SINAILADVPKERNTL 181
Score = 36.7 bits (81), Expect = 0.61
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
+QTG+GKT A+ LP + I+ + + P +L+L PTREL QI D+ ++
Sbjct: 47 AQTGTGKTAAFGLPLLQQIDVKNRV-----PQSLILCPTRELCLQIAGDLNDYSKYI 98
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 77.0 bits (181), Expect = 5e-13
Identities = 39/89 (43%), Positives = 54/89 (60%)
Frame = +1
Query: 286 GGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 465
GG REQA LE GV+IV+ TPGRL DF+ + +L +VLDEAD+MLDMGF +I
Sbjct: 152 GGQSGREQADALENGVQIVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLDMGFADEI 211
Query: 466 RKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
+ ++ + RQT+ P+ +L R
Sbjct: 212 KTVMRDLPGSRQTVLFSATFPESIEHLSR 240
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
K+ +++TGSGKT A+ LP + IN P+ + AL+L PTRELA Q+
Sbjct: 85 KDIIGQAKTGSGKTAAFSLPILNKINLDQPLLQ-----ALILCPTRELASQV 131
Score = 33.1 bits (72), Expect = 7.6
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
V+ +G++ TPIQ + P+ ++GK+++G AK
Sbjct: 62 VQELGFETLTPIQQESIPLLLAGKDIIGQAK 92
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 77.0 bits (181), Expect = 5e-13
Identities = 35/81 (43%), Positives = 51/81 (62%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R V+GG Q RDL+ G IV+ TPGR+ID L++ T N + ++LDEAD ML+
Sbjct: 99 LRVLAVYGGESIERQIRDLKAGAHIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLN 158
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF I I+ ++ +RQT+
Sbjct: 159 MGFREDIELILTRLPEERQTV 179
Score = 40.3 bits (90), Expect = 0.050
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
K+ + ++QTG+GKT A+ +PAI H++ I + +L+L PTRELA Q+
Sbjct: 39 KDLTGQAQTGTGKTAAFGIPAIEHVDIS--INQTQ---SLILCPTRELALQV 85
Score = 36.3 bits (80), Expect = 0.81
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++++GY E TPIQ + PI M+GK+L G A+
Sbjct: 16 IESIGYSEATPIQEKTIPILMTGKDLTGQAQ 46
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 77.0 bits (181), Expect = 5e-13
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+ + + GG +Q L +GV+++IATPGRLID ++G L LV+DEADRMLD
Sbjct: 323 LNHALLIGGESMNDQRDVLSKGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLD 382
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF P + +I+ + +RQTL
Sbjct: 383 MGFIPDVERIVSLLPHNRQTL 403
Score = 40.3 bits (90), Expect = 0.050
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
+QTG+GKT ++ LP + ++++ R P +L+L PTRELA Q+ + +G +L
Sbjct: 267 AQTGTGKTASFTLPMMDILSDRRA--RARMPRSLILEPTRELALQVAENFVKYGQYL 321
Score = 37.5 bits (83), Expect = 0.35
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+ MGY PTPIQAQ P+ + G++++G A+
Sbjct: 238 ITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQ 268
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 77.0 bits (181), Expect = 5e-13
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R + V GG P Q L+RG++++IATPGRL+D +++ +L VLDEAD M D
Sbjct: 248 LRLSVVVGGVPYGRQIAALQRGIDVLIATPGRLVDLIDRDAVSLAEVDVAVLDEADHMAD 307
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
+GF P +R I+E +P Q +
Sbjct: 308 LGFLPNVRAILEGTKPGGQRM 328
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/82 (36%), Positives = 39/82 (47%)
Frame = +2
Query: 17 GLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 196
G+ A S L D ++ R++TGSGKTL + LP + + Q R P LV
Sbjct: 165 GMTAPFAIQSRTLPDGIAGRDILGRARTGSGKTLGFGLPMLARLAQQKRPRITGAPRGLV 224
Query: 197 LAPTRELAQQIQQVAADFGPHL 262
L PTRELA Q+ G L
Sbjct: 225 LVPTRELAMQVADALRPLGDSL 246
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 77.0 bits (181), Expect = 5e-13
Identities = 42/92 (45%), Positives = 55/92 (59%)
Frame = +1
Query: 259 SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRM 438
S +R+T VFGG Q L +GV+I++ATPGRLID +G +L + VLDEAD M
Sbjct: 102 SNLRSTAVFGGVSLEPQKEILAKGVDILVATPGRLIDLQMQGNIDLSQLEIFVLDEADLM 161
Query: 439 LDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK 534
LDMGF I+KI + +QTL P+K
Sbjct: 162 LDMGFINDIKKIEKLCPRKKQTLLFSATIPEK 193
Score = 42.3 bits (95), Expect = 0.012
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQI 229
+QTG+GKT A+ LP I + ++ +G+ I ALV+ PTRELA QI
Sbjct: 45 AQTGTGKTAAFALPIINLLFDKQDAEKGEKKIKALVITPTRELAIQI 91
>UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 697
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGV-EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 441
++ + ++GG K Q LE+ +I+I+TPGRLI+ +E G +L T LVLDEAD+ML
Sbjct: 320 IKTSVIYGGISKNLQIEQLEKEKPQILISTPGRLIEMIENGHVDLSSVTMLVLDEADKML 379
Query: 442 DMGFEPQIRKIIEQIRPDRQTL 507
G PQ+++I QIRPD Q +
Sbjct: 380 SKGLIPQLKQIRGQIRPDSQNI 401
Score = 40.3 bits (90), Expect = 0.050
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +3
Query: 489 PRQTDFEWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQIVDICQEHEKENKL 665
P + +SAT+P +K++++D++ D I++ IGS +L ++I Q + H+K L
Sbjct: 396 PDSQNILFSATFPDSLKEVSKDWIKDPSIRLRIGSSELPKLNHIQQDAQLIAHHKKPRAL 455
Query: 666 NVLLQEIGQSQEPGAKTIIF 725
LL E Q +E KTI+F
Sbjct: 456 IKLLSE-PQFKEK-KKTIVF 473
Score = 32.7 bits (71), Expect = 10.0
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 12/58 (20%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVH------------INNQPPIRRGDGPIALVLAPTRELAQQI 229
S GSGKTL Y+ P I H I + ++ G + LVL PTREL Q+
Sbjct: 250 SLPGSGKTLGYLAPMIPHCLARVDRGGKNKITGEKAPKQYTGILVLVLVPTRELGLQV 307
>UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 634
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 423
+F T + VR GG R L GV +++ATPGRL+ F+ G +L C ++VLD
Sbjct: 308 KFATGTSVRVHLTHGGVNVRHDLMQLRSGVSVLVATPGRLLHFIRSGLISLSMCNFIVLD 367
Query: 424 EADRMLDMGFEPQIRKIIE-QIRPDRQT 504
EADR+LD GFE ++R+ +E + P R+T
Sbjct: 368 EADRLLDEGFEGEMREFLEHEDLPPRET 395
Score = 38.3 bits (85), Expect = 0.20
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 7/53 (13%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI--NNQPPIR--RGDG---PIALVLAPTRELAQQI 229
+QTGSGKT A++LP + + ++ P+ DG P A+V+ PT ELAQQI
Sbjct: 250 AQTGSGKTAAFMLPILKTVLDPSKGPVLGVAADGKPAPRAIVVVPTHELAQQI 302
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 77.0 bits (181), Expect = 5e-13
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +1
Query: 196 LGAYQRVSTTNSASCCRFWTTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDF 372
L + ++T A +F T C+ G E A L G EI++ATPGRL+D
Sbjct: 339 LAPTRELATQIQAEVIKFATRMGFTVVCLIGNKRTIEEDAFALRNGAEIIVATPGRLVDC 398
Query: 373 LEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 492
LE+ L +C+Y+VLDEADRM+D GFE I KI+ + P
Sbjct: 399 LERHLLVLSQCSYVVLDEADRMVDGGFEDSIHKILAALPP 438
Score = 64.5 bits (150), Expect = 3e-09
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
S+TGSGKT A++LP + +I PP+ + +GP AL+LAPTRELA QIQ F +
Sbjct: 301 SKTGSGKTAAFVLPMLSYIEPLPPLNEVTKTEGPYALILAPTRELATQIQAEVIKFATRM 360
Query: 263 MFVTRVCLV 289
F T VCL+
Sbjct: 361 GF-TVVCLI 368
Score = 42.3 bits (95), Expect = 0.012
Identities = 27/86 (31%), Positives = 44/86 (51%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT P V+++A++YL + IG++ + + Q + + E E+ NKL
Sbjct: 465 RQTVM-YSATMPPSVERIAKNYLKHPAMVTIGTIGEAVDTVEQQAMWVVSEDERRNKLRA 523
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
+L G G I+FV TK +
Sbjct: 524 MLNTYG----TGKLVIVFVNTKSNCD 545
Score = 38.7 bits (86), Expect = 0.15
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K +GY EPTP+Q PIA+ ++L+G++K
Sbjct: 272 IKQVGYTEPTPVQRAAIPIALQCRDLIGISK 302
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/95 (40%), Positives = 56/95 (58%)
Frame = +1
Query: 262 YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 441
+++ V+GG R Q L RGV++V+ TPGR++D + +GT + T LVLDEAD ML
Sbjct: 168 HLKVLAVYGGTDFRSQISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEML 227
Query: 442 DMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
MGF + I+EQ+ +RQ + P + R L
Sbjct: 228 RMGFIDDVEWILEQLPKERQVVLFSATMPPEIRRL 262
Score = 39.5 bits (88), Expect = 0.087
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +2
Query: 11 DNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 190
D G + + + ++ ++QTG+GKT A+ LP + + + P
Sbjct: 88 DKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLERLESGQKT-----PQV 142
Query: 191 LVLAPTRELAQQI 229
LVLAPTRELA Q+
Sbjct: 143 LVLAPTRELAMQV 155
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 76.6 bits (180), Expect = 6e-13
Identities = 36/76 (47%), Positives = 51/76 (67%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
+ GG +EQ + +++GV+++IATPGRL+D E+G L +V+DEADRMLDMGF P
Sbjct: 116 LIGGVSFKEQEQAIDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIP 175
Query: 460 QIRKIIEQIRPDRQTL 507
I +I + RQTL
Sbjct: 176 DIERIFGLVPFTRQTL 191
Score = 40.3 bits (90), Expect = 0.050
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
+QTG+GKT ++ LP I + R P +LVL PTRELA Q+ + + H+ +
Sbjct: 55 AQTGTGKTASFTLPMITMLARGRA--RARMPRSLVLCPTRELAAQVAENFDIYAKHVK-L 111
Query: 272 TRVCLV--VLLKESKPGTWRG 328
T+ L+ V KE + +G
Sbjct: 112 TKALLIGGVSFKEQEQAIDKG 132
Score = 35.1 bits (77), Expect = 1.9
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVAK 98
GY+ PTPIQA P A++G++++G+A+
Sbjct: 30 GYESPTPIQAGAIPPALAGRDVLGIAQ 56
>UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Rhodococcus sp. (strain RHA1)
Length = 465
Score = 76.6 bits (180), Expect = 6e-13
Identities = 36/76 (47%), Positives = 49/76 (64%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 459
V GG P + Q L RGV+++IATPGRL D + +G+ +L T L LDEAD M D+GF P
Sbjct: 119 VVGGIPIKRQVEILSRGVDLLIATPGRLADHVAQGSVSLDDVTVLALDEADHMADLGFMP 178
Query: 460 QIRKIIEQIRPDRQTL 507
Q+ I+++ D Q L
Sbjct: 179 QVTTILDKTPADGQRL 194
Score = 47.6 bits (108), Expect = 3e-04
Identities = 33/83 (39%), Positives = 46/83 (55%)
Frame = +2
Query: 44 SSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 223
++ + D ++ R+ TGSGKTLA+ LP +V + RRG P +VL PTRELA
Sbjct: 42 AATIPDVLAGRDVLGRAPTGSGKTLAFGLPMLVRLKGAAS-RRG-FPRGIVLVPTRELAL 99
Query: 224 QIQQVAADFGPHLMFVTRVCLVV 292
QI++ + P L RV VV
Sbjct: 100 QIERALDE--PALSVGLRVANVV 120
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 76.6 bits (180), Expect = 6e-13
Identities = 35/82 (42%), Positives = 50/82 (60%)
Frame = +1
Query: 262 YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 441
+++ V+GG +Q L RG + V+ATPGR +D+L +G +L R VLDEAD ML
Sbjct: 98 HLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEML 157
Query: 442 DMGFEPQIRKIIEQIRPDRQTL 507
MGFE ++ ++ P RQTL
Sbjct: 158 SMGFEEEVEALLSATPPSRQTL 179
Score = 52.0 bits (119), Expect = 2e-05
Identities = 29/66 (43%), Positives = 37/66 (56%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
K+ +++TG+GKTLA+ LP + P RG P ALVL PTRELA Q+
Sbjct: 39 KDLIGQARTGTGKTLAFALPIAERL--APSQERGRKPRALVLTPTRELALQVASELTAVA 96
Query: 254 PHLMFV 271
PHL V
Sbjct: 97 PHLKVV 102
Score = 34.7 bits (76), Expect = 2.5
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVAK 98
G PTPIQA P+A+ GK+L+G A+
Sbjct: 20 GLTTPTPIQAAALPLALEGKDLIGQAR 46
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 76.6 bits (180), Expect = 6e-13
Identities = 35/80 (43%), Positives = 52/80 (65%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
VR V+GG+ +EQAR++ RG +IV+ATPGR+ D + + ++ + +Y VLDEAD ML+
Sbjct: 100 VRVVAVYGGSNIQEQAREISRGAQIVVATPGRMQDMMRRRMVDITKLSYCVLDEADEMLN 159
Query: 445 MGFEPQIRKIIEQIRPDRQT 504
MGF I I+ D+ T
Sbjct: 160 MGFYEDITNILADTPEDKLT 179
Score = 36.3 bits (80), Expect = 0.81
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
+QTG+GKT A+ P + +I+ +G L++APTREL QI + H+ V
Sbjct: 46 AQTGTGKTAAFGFPLLQNIDASSKTTQG-----LIIAPTRELCLQITNEMKLYAKHIKGV 100
Query: 272 TRVCL 286
V +
Sbjct: 101 RVVAV 105
Score = 33.1 bits (72), Expect = 7.6
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +3
Query: 480 ANTPR-QTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKE 656
A+TP + + +SAT P+EV ++A++++ D ++I +G A N+ + ++
Sbjct: 171 ADTPEDKLTWLFSATMPREVARIAKEFMHDPLEITVGHKNEGAK-NVSHEYYVVHTRDRY 229
Query: 657 NKLNVLLQEIGQSQEPGAKTIIFVETKRKAE 749
L L P ++IF TKR +
Sbjct: 230 QALKRL-----SDANPDIFSVIFCRTKRDTQ 255
>UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1;
Picrophilus torridus|Rep: ATP-dependent RNA helicase -
Picrophilus torridus
Length = 387
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/98 (38%), Positives = 58/98 (59%)
Frame = +1
Query: 259 SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRM 438
++ R T V+GG+ +Q DL R +I+I TPGR+ID + + NL+ +LDEAD M
Sbjct: 98 NFFRTTVVYGGSSMEKQIHDL-RDSKIIIGTPGRIIDLINRDLLNLEHVGMFILDEADMM 156
Query: 439 LDMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
LDMGF I KIIE + RQ + P++ ++++
Sbjct: 157 LDMGFIDDIYKIIENLPEKRQNVLASATMPERLDDMIK 194
Score = 37.1 bits (82), Expect = 0.46
Identities = 24/64 (37%), Positives = 33/64 (51%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMF 268
+S TGSGKT A+++PAI Q + L++ PTRELA Q VA + +
Sbjct: 47 KSMTGSGKTAAFLIPAI-----QRALGSKFFNTVLIILPTRELALQTYSVALNISRNFFR 101
Query: 269 VTRV 280
T V
Sbjct: 102 TTVV 105
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 76.6 bits (180), Expect = 6e-13
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVLDEADRM 438
+R+ C+ GG EQARDL R ++IATPGRLID LE KG +L++ YLV+DE DRM
Sbjct: 195 LRSVCIIGGMSMMEQARDLMRKPHVIIATPGRLIDHLEHTKG-FSLKKLQYLVMDEVDRM 253
Query: 439 LDMGFEPQIRKIIEQIRPDRQTLS 510
+D+ + I +I++QI P Q ++
Sbjct: 254 IDLDYAKAIDQILKQI-PSHQRIT 276
Score = 39.1 bits (87), Expect = 0.12
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
++TGSGKT A+ +P + Q ALVLAPTRELA QI++ G M +
Sbjct: 142 AETGSGKTAAFAIPIL-----QTLYTAAQPYYALVLAPTRELAFQIKETFDALGSS-MGL 195
Query: 272 TRVCLV 289
VC++
Sbjct: 196 RSVCII 201
Score = 37.5 bits (83), Expect = 0.35
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++++ Y +PTPIQA P A+ GK++VG+A+
Sbjct: 113 IQSLKYTQPTPIQAAAIPHALQGKDIVGIAE 143
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 76.2 bits (179), Expect = 8e-13
Identities = 29/72 (40%), Positives = 49/72 (68%)
Frame = +1
Query: 262 YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 441
++ TC++GG Q + RG+++V+ TPGR++D++ K T +L + ++VLDE DRML
Sbjct: 200 HLSTTCIYGGTSYWPQESAIRRGLDVVVGTPGRILDYIRKNTLDLSKLKHVVLDEVDRML 259
Query: 442 DMGFEPQIRKII 477
DMGF + +I+
Sbjct: 260 DMGFAESVEEIL 271
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
+++TG+GKTL+++LP +V Q P + G PI L LAPTRELA+QI + GPHL
Sbjct: 145 QARTGTGKTLSFVLP-LVEKWQQFPQKSGRQPIILALAPTRELAKQISEYFEAIGPHL 201
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 76.2 bits (179), Expect = 8e-13
Identities = 35/81 (43%), Positives = 53/81 (65%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R+ + GG + Q +DLE I++ATPGRLID ++ G+ ++ + VLDEADRMLD
Sbjct: 100 IRSVPIIGGTDYKSQNKDLEGLNGIIVATPGRLIDMIKSGSIDISNVEFFVLDEADRMLD 159
Query: 445 MGFEPQIRKIIEQIRPDRQTL 507
MGF IR ++ + + +QTL
Sbjct: 160 MGFIQDIRWLLHKCKNRKQTL 180
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADF 250
K+ + +QTG+GKT+A+++P I +I + +G G ALVLAPTREL QI + A
Sbjct: 39 KDITGLAQTGTGKTVAFLIPVIHNI-----LTKGIQGIAALVLAPTRELTMQIAEEAKKL 93
Query: 251 GPH 259
H
Sbjct: 94 LKH 96
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 809,991,268
Number of Sequences: 1657284
Number of extensions: 17150891
Number of successful extensions: 49571
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 44783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48415
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -