Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0080
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 144 6e-35
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 102 3e-22
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 97 2e-20
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 94 8e-20
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 94 1e-19
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 94 1e-19
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 93 3e-19
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 93 3e-19
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 93 3e-19
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 86 3e-17
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 67 1e-11
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 65 4e-11
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 65 6e-11
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 65 6e-11
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 64 1e-10
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 63 2e-10
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 63 2e-10
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 62 3e-10
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 62 3e-10
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 61 7e-10
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 61 7e-10
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 61 7e-10
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 61 9e-10
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 61 9e-10
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 61 9e-10
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 61 9e-10
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 61 9e-10
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 55 5e-08
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 55 5e-08
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 52 3e-07
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 52 3e-07
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 51 8e-07
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 51 8e-07
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 44 1e-04
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 44 2e-04
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 42 6e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 41 8e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 40 0.002
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 37 0.013
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 37 0.013
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 37 0.018
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.094
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.16
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.5
U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical pr... 29 4.7
U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical pr... 29 4.7
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 144 bits (349), Expect = 6e-35
Identities = 67/94 (71%), Positives = 80/94 (85%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
++ TC+FGGA K QARDLERGV+IV+ATPGRL+DFL+ GTTN+++C+YLVLDEADRMLD
Sbjct: 231 LKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLD 290
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNL 546
MGFEPQI+KII QIRPDRQTL PK+ R L
Sbjct: 291 MGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRAL 324
Score = 95.5 bits (227), Expect = 4e-20
Identities = 50/86 (58%), Positives = 62/86 (72%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SATWPKEV+ LA D+ D +N+GSL+L+ANHNI Q+VDI +EH K+ KL
Sbjct: 308 RQT-LMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLME 366
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAE 749
LL I +E KTIIFVETKRKA+
Sbjct: 367 LLNHIMNQKE--CKTIIFVETKRKAD 390
Score = 77.8 bits (183), Expect = 8e-15
Identities = 37/65 (56%), Positives = 49/65 (75%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
++TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF H + +
Sbjct: 173 AKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDF-CHSLGL 231
Query: 272 TRVCL 286
CL
Sbjct: 232 KMTCL 236
Score = 37.5 bits (83), Expect = 0.010
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +3
Query: 21 YKEPTPIQAQGWPIAMSGKNLVGVAK 98
+++PT IQ+ WPIAMSG++++ +AK
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAK 174
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 102 bits (244), Expect = 3e-22
Identities = 48/80 (60%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
Frame = +1
Query: 277 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDM 447
C +GG EQ DL+RG EIV+ TPGR+ID L + TNL+R TYLVLDEADRM D
Sbjct: 410 CTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDK 469
Query: 448 GFEPQIRKIIEQIRPDRQTL 507
GFEPQI K++ IRPD+QT+
Sbjct: 470 GFEPQIMKVVNNIRPDKQTV 489
Score = 68.9 bits (161), Expect = 4e-12
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
++TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F L
Sbjct: 348 AKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPL 404
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/81 (33%), Positives = 48/81 (59%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
+SAT+P+ ++ LA L ++I +G + + +I Q IC EH+K K LL+ +G
Sbjct: 491 FSATFPRHMEALARKVLDKPVEILVGGKSVVCS-DITQNAVICAEHQKFLK---LLELLG 546
Query: 690 QSQEPGAKTIIFVETKRKAEN 752
E G+ +I+FV+ + KA++
Sbjct: 547 MYYEEGS-SIVFVDKQEKADD 566
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+K Y +PT IQAQ P MSG++++G+AK
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVIGIAK 349
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 96.7 bits (230), Expect = 2e-20
Identities = 43/89 (48%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPKREQARDLER-GVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 420
+F + C +GG K EQ+ +L+ G E+V+ TPGR+ID ++ G TN R T+LV
Sbjct: 360 KFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVF 419
Query: 421 DEADRMLDMGFEPQIRKIIEQIRPDRQTL 507
DEADRM DMGFE Q++ I + +RPDRQ L
Sbjct: 420 DEADRMFDMGFEAQVKSISDHVRPDRQCL 448
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/53 (56%), Positives = 42/53 (79%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 250
++TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F
Sbjct: 309 AKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKF 361
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK----RVPAKRWP 122
++ Y++PTPIQA P A+SG++++G+AK + A WP
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 94.3 bits (224), Expect = 8e-20
Identities = 47/86 (54%), Positives = 57/86 (66%)
Frame = +1
Query: 277 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 456
C+ GG P EQA+D+ G+ IV+ATPGRL D L K NL+ C YLVLDEADRMLDMGFE
Sbjct: 306 CI-GGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFE 364
Query: 457 PQIRKIIEQIRPDRQTLSGQLLGPKK 534
+I+ I + RQTL P+K
Sbjct: 365 DEIKSIFYFFKAQRQTLLFSATMPRK 390
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQI 229
+ TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI
Sbjct: 234 ASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
Score = 35.9 bits (79), Expect = 0.031
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 9 KTMGYKEPTPIQAQGWPIAMSGKNLVGVA 95
K G PT IQ QG P+A+SG++++G+A
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGIA 234
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/87 (32%), Positives = 48/87 (55%)
Frame = +3
Query: 492 RQTDFEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
RQT +SAT P++++ A+ L I +N+G +A+ N+LQ ++ + ENKL
Sbjct: 378 RQT-LLFSATMPRKIQFFAKSALVKPIVVNVGRAG-AASLNVLQELEFVR---SENKLVR 432
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKAEN 752
+L+ + Q+ K +IF E K +N
Sbjct: 433 VLECL---QKTSPKVLIFAEKKVDVDN 456
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 93.9 bits (223), Expect = 1e-19
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
++ V GGA + +Q L GVE+VIATPGRL+D LE L +CTY++LDEADRMLD
Sbjct: 407 IKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLD 466
Query: 445 MGFEPQIRKIIEQIRPD 495
MGFEP ++K++E + PD
Sbjct: 467 MGFEPDVQKVLEYM-PD 482
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFG 253
++TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 345 AETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFG 402
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
VK +GY EPTPIQ Q PI + ++++GVA+
Sbjct: 316 VKEIGYLEPTPIQRQAIPIGLQNRDVIGVAE 346
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/77 (57%), Positives = 54/77 (70%)
Frame = +1
Query: 268 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 447
++ C++GG + EQ GVEIVIATPGRL D G +L TY+VLDEADRMLDM
Sbjct: 192 KSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDM 251
Query: 448 GFEPQIRKIIEQIRPDR 498
GFE IR+I+ +IRPDR
Sbjct: 252 GFEVAIRRILFEIRPDR 268
Score = 55.6 bits (128), Expect = 4e-08
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 6/53 (11%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQ 232
SQTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIE 180
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/80 (26%), Positives = 42/80 (52%)
Frame = +3
Query: 513 SATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQ 692
SATWP+ V+KL + Y + + GSL L++ ++ Q + + ++ ++ +
Sbjct: 274 SATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFEFVPHDSRFLRVCEIVNFLTA 333
Query: 693 SQEPGAKTIIFVETKRKAEN 752
+ K IIFV++K A++
Sbjct: 334 AHGQNYKMIIFVKSKVMADH 353
Score = 39.1 bits (87), Expect = 0.003
Identities = 12/31 (38%), Positives = 26/31 (83%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ G+++P+PIQ+Q WP+ +SG++ +GV++
Sbjct: 99 IRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQ 129
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 92.7 bits (220), Expect = 3e-19
Identities = 46/86 (53%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 420
+F S ++ ++GG R+Q L G I+IATPGRLID +E+G L C YLVL
Sbjct: 244 KFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVL 303
Query: 421 DEADRMLDMGFEPQIRKIIEQIRPDR 498
DEADRMLDMGFEPQIRKI+ Q P +
Sbjct: 304 DEADRMLDMGFEPQIRKIVGQGMPPK 329
Score = 48.0 bits (109), Expect = 7e-06
Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 10/63 (15%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQIQQVA 241
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 183 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 242
Query: 242 ADF 250
F
Sbjct: 243 TKF 245
Score = 44.4 bits (100), Expect = 9e-05
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +3
Query: 495 QTDFEWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
+T +SAT+PKE++ LA+D+L D YI + +G + S + NI Q + E EK +
Sbjct: 332 RTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSN--- 387
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKA 746
L EI ++ ++FVETKR A
Sbjct: 388 -LMEILMNEHSENLVLVFVETKRGA 411
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
V GY +PTP+Q P ++ ++L+ A+
Sbjct: 154 VNRSGYSKPTPVQKHSIPTLLANRDLMSCAQ 184
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 92.7 bits (220), Expect = 3e-19
Identities = 46/86 (53%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 420
+F S ++ ++GG R+Q L G I+IATPGRLID +E+G L C YLVL
Sbjct: 228 KFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVL 287
Query: 421 DEADRMLDMGFEPQIRKIIEQIRPDR 498
DEADRMLDMGFEPQIRKI+ Q P +
Sbjct: 288 DEADRMLDMGFEPQIRKIVGQGMPPK 313
Score = 48.0 bits (109), Expect = 7e-06
Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 10/63 (15%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQIQQVA 241
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 167 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 226
Query: 242 ADF 250
F
Sbjct: 227 TKF 229
Score = 44.4 bits (100), Expect = 9e-05
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +3
Query: 495 QTDFEWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
+T +SAT+PKE++ LA+D+L D YI + +G + S + NI Q + E EK +
Sbjct: 316 RTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSN--- 371
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKA 746
L EI ++ ++FVETKR A
Sbjct: 372 -LMEILMNEHSENLVLVFVETKRGA 395
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
V GY +PTP+Q P ++ ++L+ A+
Sbjct: 138 VNRSGYSKPTPVQKHSIPTLLANRDLMSCAQ 168
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 92.7 bits (220), Expect = 3e-19
Identities = 46/86 (53%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +1
Query: 244 RFWTTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 420
+F S ++ ++GG R+Q L G I+IATPGRLID +E+G L C YLVL
Sbjct: 225 KFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVL 284
Query: 421 DEADRMLDMGFEPQIRKIIEQIRPDR 498
DEADRMLDMGFEPQIRKI+ Q P +
Sbjct: 285 DEADRMLDMGFEPQIRKIVGQGMPPK 310
Score = 48.0 bits (109), Expect = 7e-06
Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 10/63 (15%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQIQQVA 241
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 164 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 223
Query: 242 ADF 250
F
Sbjct: 224 TKF 226
Score = 44.4 bits (100), Expect = 9e-05
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +3
Query: 495 QTDFEWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 671
+T +SAT+PKE++ LA+D+L D YI + +G + S + NI Q + E EK +
Sbjct: 313 RTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSN--- 368
Query: 672 LLQEIGQSQEPGAKTIIFVETKRKA 746
L EI ++ ++FVETKR A
Sbjct: 369 -LMEILMNEHSENLVLVFVETKRGA 392
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
V GY +PTP+Q P ++ ++L+ A+
Sbjct: 135 VNRSGYSKPTPVQKHSIPTLLANRDLMSCAQ 165
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 85.8 bits (203), Expect = 3e-17
Identities = 39/73 (53%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = +1
Query: 265 VRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 441
+ + ++GG ++Q L G I+IATPGRLID +++G ++ C YLVLDEADRML
Sbjct: 279 ITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRML 338
Query: 442 DMGFEPQIRKIIE 480
DMGFEPQIR+I+E
Sbjct: 339 DMGFEPQIRQIVE 351
Score = 52.0 bits (119), Expect = 4e-07
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEI 686
+SAT+PKE++ LA+D+L + Y+ + +G + S + NI+Q + +E EK + L LL
Sbjct: 366 FSATFPKEIQLLAQDFLKENYVFLAVGRVG-STSENIMQKIVWVEEDEKRSYLMDLLDAT 424
Query: 687 GQSQEPGAKTIIFVETKRKAEN 752
G S + T++FVETKR A +
Sbjct: 425 GDS----SLTLVFVETKRGASD 442
Score = 36.3 bits (80), Expect = 0.023
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 11/57 (19%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQI 229
+QTGSGKT A+++P + I P R+ P ALVL+PTREL+ QI
Sbjct: 210 AQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQI 266
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
+KT GY PTP+Q P G++L+ A+
Sbjct: 181 IKTAGYDRPTPVQKYSIPALQGGRDLMSCAQ 211
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 66.9 bits (156), Expect = 1e-11
Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Frame = +1
Query: 178 WSDCFGLGAYQRVSTTNSASCCRFWTTSYVRN----TC--VFGGAPKREQARDLERGVEI 339
WS +GLGA +S T + F T + V +C V GG+ + R+ G+ I
Sbjct: 143 WSPDYGLGALI-ISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFE-RNRISGINI 200
Query: 340 VIATPGRLIDFL-EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLSGQ 516
++ TPGRL+ + E + LVLDEADRMLDMGF Q+ II + +RQTL
Sbjct: 201 IVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFS 260
Query: 517 LLGPKK*RNLLRI-TWETTFRSI 582
+ ++L R+ T + F S+
Sbjct: 261 ATQTRNVKDLCRVCTNDPVFVSV 283
Score = 37.5 bits (83), Expect = 0.010
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +2
Query: 8 KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 187
KDN + +A S + ++TGSGKTLA ++P ++ + G
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDYGLG 150
Query: 188 ALVLAPTRELAQQIQQVAADFGPH 259
AL+++PTRELA Q G H
Sbjct: 151 ALIISPTRELALQTFSTINAVGAH 174
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 65.7 bits (153), Expect = 3e-11
Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVLDEADRMLDMGF 453
+ GG QA L R I++ATPGRL+D LE KG NL+ +L++DEADR+L+M F
Sbjct: 146 IVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGF-NLKALKFLIMDEADRILNMDF 204
Query: 454 EPQIRKIIEQIRPDRQT 504
E ++ KI++ I +R+T
Sbjct: 205 EVELDKILKVIPRERRT 221
Score = 37.9 bits (84), Expect = 0.008
Identities = 27/92 (29%), Positives = 41/92 (44%)
Frame = +2
Query: 5 CKDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGP 184
C+ G + + L + K+ ++TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP-----QAF 113
Query: 185 IALVLAPTRELAQQIQQVAADFGPHLMFVTRV 280
LVL PTRELA QI Q G + + V
Sbjct: 114 FCLVLTPTRELAFQIGQQFEALGSGIGLIAAV 145
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/74 (39%), Positives = 45/74 (60%)
Frame = +1
Query: 286 GGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 465
GG R+ L V +VIATPGR++D +EKG ++ C LVLDEAD++L F+ +
Sbjct: 147 GGTDLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGIL 206
Query: 466 RKIIEQIRPDRQTL 507
++I + +RQ +
Sbjct: 207 DRLINFLPKERQVM 220
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMF 268
R++ G+GKT AY +P I I QP ++ A+V+ PTRELA Q Q+ + H+
Sbjct: 86 RAKNGTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQICVELSKHIQL 140
Query: 269 VTRV 280
V
Sbjct: 141 KVMV 144
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 64.9 bits (151), Expect = 6e-11
Identities = 32/89 (35%), Positives = 50/89 (56%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R C+ GG EQ + +I++ATPGRL+ + + L Y+V DEADR+ +
Sbjct: 122 LRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFE 181
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPK 531
MGF+ Q+ + +++I RQTL PK
Sbjct: 182 MGFQDQLTETLKRIPESRQTLLFSATLPK 210
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
S+TGSGKT A+++P + + R G AL+++PTRELA Q +V + G
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELG 117
Score = 31.1 bits (67), Expect = 0.88
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ G+ +PTPIQ + P M GK++V +++
Sbjct: 39 IEKKGFNQPTPIQRKTIPCIMDGKDVVAMSR 69
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 64.9 bits (151), Expect = 6e-11
Identities = 32/89 (35%), Positives = 50/89 (56%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
+R C+ GG EQ + +I++ATPGRL+ + + L Y+V DEADR+ +
Sbjct: 122 LRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFE 181
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPK 531
MGF+ Q+ + +++I RQTL PK
Sbjct: 182 MGFQDQLTETLKRIPESRQTLLFSATLPK 210
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
S+TGSGKT A+++P + + R G AL+++PTRELA Q +V + G
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELG 117
Score = 31.1 bits (67), Expect = 0.88
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 6 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 98
++ G+ +PTPIQ + P M GK++V +++
Sbjct: 39 IEKKGFNQPTPIQRKTIPCIMDGKDVVAMSR 69
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR-CTYLVLDEADRMLDMGFE 456
V GG+ + + L +GV I++ATPGRL+D L+ L R L++DEADR+LD+GFE
Sbjct: 174 VMGGSNRSAEKDKLAKGVSILVATPGRLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFE 233
Query: 457 PQIRKIIEQIRPDRQTL 507
++++++ + RQ++
Sbjct: 234 IEMQQVLRHLPKQRQSM 250
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/52 (38%), Positives = 37/52 (71%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 247
++TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++
Sbjct: 112 AKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSE 162
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFE 456
V+GG + +G I++ T GR+ F E G L +C YLVLDEADRM+D MGF
Sbjct: 409 VYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFG 468
Query: 457 PQIRKII 477
P+I +II
Sbjct: 469 PEIEQII 475
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADF 250
+QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F
Sbjct: 342 AQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKF 398
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFE 456
V+GG + +G I++ T GR+ F E G L +C YLVLDEADRM+D MGF
Sbjct: 409 VYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFG 468
Query: 457 PQIRKII 477
P+I +II
Sbjct: 469 PEIEQII 475
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADF 250
+QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F
Sbjct: 342 AQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKF 398
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +1
Query: 277 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 456
C+ GG R+ R LE G+ +V+ TPGR+ D + + + R VLDEAD ML GF+
Sbjct: 131 CI-GGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFK 189
Query: 457 PQIRKIIEQIRPDRQTL 507
QI ++ + D Q +
Sbjct: 190 DQIYEVFRSMPQDVQVV 206
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/82 (32%), Positives = 46/82 (56%)
Frame = +2
Query: 17 GLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 196
G ++ A + K+ ++Q+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 197 LAPTRELAQQIQQVAADFGPHL 262
+APTRELAQQIQ+V + G +L
Sbjct: 103 MAPTRELAQQIQKVMSALGEYL 124
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +1
Query: 277 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 456
C+ GG R+ R LE G+ +V+ TPGR+ D + + + R VLDEAD ML GF+
Sbjct: 131 CI-GGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFK 189
Query: 457 PQIRKIIEQIRPDRQTL 507
QI ++ + D Q +
Sbjct: 190 DQIYEVFRSMPQDVQVV 206
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/82 (32%), Positives = 46/82 (56%)
Frame = +2
Query: 17 GLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 196
G ++ A + K+ ++Q+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 197 LAPTRELAQQIQQVAADFGPHL 262
+APTRELAQQIQ+V + G +L
Sbjct: 103 MAPTRELAQQIQKVMSALGEYL 124
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 61.3 bits (142), Expect = 7e-10
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFE 456
V+GG +E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF
Sbjct: 452 VYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFG 511
Query: 457 PQIRKII 477
I I+
Sbjct: 512 TDIETIV 518
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGPH 259
+QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQ 444
Query: 260 LM 265
M
Sbjct: 445 TM 446
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 61.3 bits (142), Expect = 7e-10
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFE 456
V+GG +E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF
Sbjct: 452 VYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFG 511
Query: 457 PQIRKII 477
I I+
Sbjct: 512 TDIETIV 518
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGPH 259
+QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQ 444
Query: 260 LM 265
M
Sbjct: 445 TM 446
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 61.3 bits (142), Expect = 7e-10
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFE 456
V+GG +E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF
Sbjct: 452 VYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFG 511
Query: 457 PQIRKII 477
I I+
Sbjct: 512 TDIETIV 518
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGPH 259
+QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQ 444
Query: 260 LM 265
M
Sbjct: 445 TM 446
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 60.9 bits (141), Expect = 9e-10
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFE 456
V+GG +E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF
Sbjct: 663 VYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFG 722
Query: 457 PQIRKII--EQI--RPDRQTL 507
I I+ E + + +RQTL
Sbjct: 723 TDIDTIVNYESMPKKENRQTL 743
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGPH 259
+QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQ 655
Query: 260 LMFVTR 277
M R
Sbjct: 656 TMMEIR 661
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 60.9 bits (141), Expect = 9e-10
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFE 456
V+GG +E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF
Sbjct: 663 VYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFG 722
Query: 457 PQIRKII--EQI--RPDRQTL 507
I I+ E + + +RQTL
Sbjct: 723 TDIDTIVNYESMPKKENRQTL 743
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGPH 259
+QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQ 655
Query: 260 LMFVTR 277
M R
Sbjct: 656 TMMEIR 661
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 60.9 bits (141), Expect = 9e-10
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL----QRCTYLVLDEADRMLDM 447
+ GG QAR+L +V+ATPGRL D +E + ++ + VLDEADRML+
Sbjct: 191 IVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEG 250
Query: 448 GFEPQIRKIIEQIRPDRQTL 507
+ Q++ I E I RQTL
Sbjct: 251 QYNDQLKPIFESISEKRQTL 270
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
++TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G +
Sbjct: 133 ARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAEQFTALGKP---I 184
Query: 272 TRVCLVVL 295
T C V++
Sbjct: 185 TLKCSVIV 192
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 60.9 bits (141), Expect = 9e-10
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL----QRCTYLVLDEADRMLDM 447
+ GG QAR+L +V+ATPGRL D +E + ++ + VLDEADRML+
Sbjct: 191 IVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEG 250
Query: 448 GFEPQIRKIIEQIRPDRQTL 507
+ Q++ I E I RQTL
Sbjct: 251 QYNDQLKPIFESISEKRQTL 270
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFV 271
++TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G +
Sbjct: 133 ARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAEQFTALGKP---I 184
Query: 272 TRVCLVVL 295
T C V++
Sbjct: 185 TLKCSVIV 192
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 60.9 bits (141), Expect = 9e-10
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Frame = +1
Query: 280 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFE 456
V+GG +E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF
Sbjct: 663 VYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFG 722
Query: 457 PQIRKII--EQI--RPDRQTL 507
I I+ E + + +RQTL
Sbjct: 723 TDIDTIVNYESMPKKENRQTL 743
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGPH 259
+QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQ 655
Query: 260 LMFVTR 277
M R
Sbjct: 656 TMMEIR 661
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/79 (35%), Positives = 41/79 (51%)
Frame = +1
Query: 271 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 450
+ C+ GG E R L+ G +V TPGR+ D + + + LVLDEAD ML+ G
Sbjct: 126 HACI-GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKG 184
Query: 451 FEPQIRKIIEQIRPDRQTL 507
F+ Q+ I + P Q +
Sbjct: 185 FKEQLYDIYRYLPPGAQVV 203
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMF 268
++Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G ++
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNV 123
Query: 269 VTRVCL 286
C+
Sbjct: 124 QCHACI 129
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/79 (35%), Positives = 41/79 (51%)
Frame = +1
Query: 271 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 450
+ C+ GG E R L+ G +V TPGR+ D + + + LVLDEAD ML+ G
Sbjct: 126 HACI-GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKG 184
Query: 451 FEPQIRKIIEQIRPDRQTL 507
F+ Q+ I + P Q +
Sbjct: 185 FKEQLYDIYRYLPPGAQVV 203
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMF 268
++Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G ++
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNV 123
Query: 269 VTRVCL 286
C+
Sbjct: 124 QCHACI 129
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +1
Query: 268 RNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
R + GG+ + DL++ +IVI TPGR+ ++ G N+ + VLDEAD+++D
Sbjct: 119 RTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMD 178
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLL 549
F I II + RQ P+ NLL
Sbjct: 179 EVFRDDINIIINSLPQIRQVAVFSATYPRNLDNLL 213
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/85 (20%), Positives = 43/85 (50%)
Frame = +2
Query: 2 RCKDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDG 181
R K++ R + + + ++ ++++G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 182 PIALVLAPTRELAQQIQQVAADFGP 256
+++ PTRE++ QI++ P
Sbjct: 91 IQKVIVTPTREISVQIKETVRKVAP 115
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +1
Query: 268 RNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 444
R + GG+ + DL++ +IVI TPGR+ ++ G N+ + VLDEAD+++D
Sbjct: 119 RTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMD 178
Query: 445 MGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLL 549
F I II + RQ P+ NLL
Sbjct: 179 EVFRDDINIIINSLPQIRQVAVFSATYPRNLDNLL 213
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/85 (20%), Positives = 43/85 (50%)
Frame = +2
Query: 2 RCKDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDG 181
R K++ R + + + ++ ++++G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 182 PIALVLAPTRELAQQIQQVAADFGP 256
+++ PTRE++ QI++ P
Sbjct: 91 IQKVIVTPTREISVQIKETVRKVAP 115
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 51.2 bits (117), Expect = 8e-07
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +1
Query: 283 FGGAPKREQARDLER--GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG-F 453
FGG + + L + I++AT GRL DF+ G +L + Y+VLDEADRM+D F
Sbjct: 849 FGGYSRNANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDF 908
Query: 454 EPQIRKII 477
++ KII
Sbjct: 909 GEEVSKII 916
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 226
+ TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 51.2 bits (117), Expect = 8e-07
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +1
Query: 283 FGGAPKREQARDLER--GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG-F 453
FGG + + L + I++AT GRL DF+ G +L + Y+VLDEADRM+D F
Sbjct: 849 FGGYSRNANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDF 908
Query: 454 EPQIRKII 477
++ KII
Sbjct: 909 GEEVSKII 916
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 226
+ TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +1
Query: 265 VRNTCVFGG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 441
V+ FGG A K+++ R IV+ TPGR++ G L + Y VLDE D+M+
Sbjct: 139 VKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 198
Query: 442 -DMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
D +++I++ +Q + PK+ R + +
Sbjct: 199 GDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCK 236
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +1
Query: 265 VRNTCVFGG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 441
V+ FGG A K+++ R IV+ TPGR++ G L + Y VLDE D+M+
Sbjct: 139 VKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 198
Query: 442 -DMGFEPQIRKIIEQIRPDRQTLSGQLLGPKK*RNLLR 552
D +++I++ +Q + PK+ R + +
Sbjct: 199 GDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCK 236
Score = 31.5 bits (68), Expect = 0.66
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +3
Query: 486 TPRQTD-FEWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENK 662
TP+Q +SAT PKE++ + + ++ D +++ + H + Q +E EK +
Sbjct: 214 TPQQKQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAEKNRR 273
Query: 663 LNVLLQEIGQSQEPGAKTIIFVETKRKAE 749
L LL + +Q +IFV+ ++ E
Sbjct: 274 LLNLLDALEFNQ-----VVIFVKAVKRCE 297
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQ 235
+++T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI +
Sbjct: 424 QAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 283 FGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGFEP 459
+G + + ++ G +I+I T GR++DF K +L +LV DEADR+L DM +P
Sbjct: 494 YGQSDRARSLNEIRNGCDILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDP 553
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 74 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF 250
K R++TGSGKT A+++P + + + G GP A+++APT+EL QI ++
Sbjct: 127 KNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKL 186
Query: 251 GPHLMFVTRVCLVVLLKESKPGTW 322
L F+ + L + E + W
Sbjct: 187 SQALPFLQAINLCD-INEEENSVW 209
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 319 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 498
LE +V+ TPG+L+ +YLV+DEAD +L G+E ++ KI ++ P
Sbjct: 210 LEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTY 269
Query: 499 QTL 507
Q L
Sbjct: 270 QCL 272
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Frame = +1
Query: 325 RGVEIVIATPGRLIDFLEKGTTNLQR----CTYLVLDEADRMLDMGFEPQIRKIIEQIRP 492
+ V I++ATPGRL ++ T + R LV+DEADR ++ FE +R+I+ I
Sbjct: 130 KNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPK 189
Query: 493 DRQT 504
R+T
Sbjct: 190 QRRT 193
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHL 262
S TGSGKTLA++LP + I N G AL+L+P+REL QI V F L
Sbjct: 53 SPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPFAEKL 107
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 265 VRNTCVFGG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 441
V+ FGG A K+++ R IV+ TPGR++ G L + Y VLDE D+M+
Sbjct: 138 VKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 197
Query: 442 DMGFEPQIRKIIEQIR 489
+ +R+ +++I+
Sbjct: 198 G---DADMRRDVQEIK 210
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = +3
Query: 510 WSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIG 689
+SAT PKE++ + + ++ D +++ + H + Q +E EK +L LL +
Sbjct: 215 FSATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAEKNRRLLNLLDALE 274
Query: 690 QSQEPGAKTIIFVETKRKAE 749
+Q +IFV+ ++ E
Sbjct: 275 FNQ-----VVIFVKAVKRCE 289
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 319 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 498
LE +V+ TPG+L+ +YLV+DEAD +L G+E ++ KI ++ P
Sbjct: 143 LEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTY 202
Query: 499 QTL 507
Q L
Sbjct: 203 QCL 205
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +2
Query: 131 PAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQVAADFGPHLMFVTRVCLVVLLK 301
P + ++ +P + DG P A+++APT+EL QI ++ L F+ + L +
Sbjct: 77 PQVDEMDFEPEHKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCD-IN 135
Query: 302 ESKPGTW 322
E + W
Sbjct: 136 EEENSVW 142
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 41.5 bits (93), Expect = 6e-04
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 25/99 (25%)
Frame = +1
Query: 286 GGAPKREQARDLERGVEIVIATPGRLIDFLEKGTT-NLQR-------------------C 405
GG + Q L G ++V+ATPGRLID L + NL C
Sbjct: 255 GGLDLKAQEAALRSGPDVVVATPGRLIDHLHNSPSFNLSNIEVFFKTPNIPPKKNSRKIC 314
Query: 406 TY-----LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 507
LVLDEADRML+ F Q+ ++I +RQTL
Sbjct: 315 KIPNFQVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTL 353
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +2
Query: 98 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGPHLMFVTR 277
TG+GKT A++LP + + +P + LVL PTRELA Q+ QV +
Sbjct: 194 TGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVC 251
Query: 278 VC 283
+C
Sbjct: 252 LC 253
Score = 31.5 bits (68), Expect = 0.66
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 18 GYKEPTPIQAQGWPIAMSGKNLVGVA 95
GY +PTPIQ P+A++GK++ A
Sbjct: 167 GYSDPTPIQQACIPVALTGKDICACA 192
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Frame = +1
Query: 253 TTSYVRNTCVFGGAPKREQARDL-ERGVEIVIATPGRLIDFLEKGTT-----NLQRCTYL 414
+T+ + T + GG + +Q R + ++ +IV+ATPGRL +++ T + L
Sbjct: 93 STTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCL 152
Query: 415 VLDEADRMLDMGFEPQIRKIIEQIRPDRQ 501
V+DE DRM++ G+ ++ I+ +I + +
Sbjct: 153 VVDETDRMVEEGYFAELTHILNKIHEESE 181
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 235
++TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 33 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Frame = +1
Query: 253 TTSYVRNTCVFGGAPKREQARDL-ERGVEIVIATPGRLIDFLEKGTT-----NLQRCTYL 414
+T+ + T + GG + +Q R + ++ +IV+ATPGRL +++ T + L
Sbjct: 260 STTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCL 319
Query: 415 VLDEADRMLDMGFEPQIRKIIEQIRPDRQ 501
V+DE DRM++ G+ ++ I+ +I + +
Sbjct: 320 VVDETDRMVEEGYFAELTHILNKIHEESE 348
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Frame = +2
Query: 92 SQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 235
++TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 200 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 265 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 441
+R + G + R LE G +IV+ TP R+ D + G + ++V+DE D+ L
Sbjct: 313 IRCVTLAAGENMNQILRTLETGCDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQFL 371
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 334 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIEQIRPD 495
+I T G+L +E G L ++LDEAD+M+D F P I I++Q++ +
Sbjct: 125 DIAFCTIGKLKATIECGDVCLDNLKTIILDEADKMIDNCAFVPDINWILDQLKEE 179
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 334 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIEQIRPD 495
+I T G+L +E G L ++LDEAD+M+D F P I I++Q++ +
Sbjct: 225 DIAFCTIGKLKATIECGDVCLDNLKTIILDEADKMIDNCAFGPDINWILDQLKEE 279
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 367 DFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 507
DFL ++ R VLDEAD ML GF+ QI ++ + D Q +
Sbjct: 119 DFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVV 165
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.094
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +2
Query: 98 TGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 226
TGSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 172 TGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
++Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 254 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 334 EIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 441
+IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 331 QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 367
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
++Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 279 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 334 EIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 441
+IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 356 QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 392
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 89 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 253
++Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 663 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 334 EIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 441
+IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 740 QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 776
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 334 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG-FEPQIRKIIEQIRPD 495
+I T G+L +E T L ++LDE+D+M+D+ F I +++Q++ D
Sbjct: 224 DIAFCTMGKLKASIEDKTILLDNLKMMILDESDKMIDIACFGNDIDWVLDQLQED 278
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 98 TGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 229
TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 138 TGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 98 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 229
TGSGKT+ Y+LP + + ++P A++L P + L QI
Sbjct: 165 TGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQI 204
Score = 31.1 bits (67), Expect = 0.88
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +1
Query: 337 IVIATPGRLIDFLEKGTT---NLQRCTYLVLDEADRM 438
+++ATP RL+ L +L + +L++DEADRM
Sbjct: 243 VIVATPARLVQHLTSKIPPPIDLSKLRFLIVDEADRM 279
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 98 TGSGKTLAYILPAIVH 145
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical
protein C35B8.3a protein.
Length = 470
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 585 GSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQE 701
GS+QL A+H Q ++CQE++ + LL+E + E
Sbjct: 257 GSIQLGADHVPEQWENVCQEYQIRKRQIPLLKETAKQLE 295
>U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical
protein C35B8.3b protein.
Length = 485
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 585 GSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQE 701
GS+QL A+H Q ++CQE++ + LL+E + E
Sbjct: 272 GSIQLGADHVPEQWENVCQEYQIRKRQIPLLKETAKQLE 310
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,629,760
Number of Sequences: 27780
Number of extensions: 411228
Number of successful extensions: 1336
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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