Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0079
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     28   0.093
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.66 
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   8.1  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   8.1  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 27.9 bits (59), Expect = 0.093
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 554 DPLFWFKNITI*CLRHLMHTLNYIKVKL 637
           DP + F N+T   L++L   LNYI +KL
Sbjct: 445 DPHYGFHNVTNTTLQNLTPQLNYISMKL 472


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 113 SQYRNSITCENPALYGGYPCYTRD*NRVI*NCVIRLPCYKG 235
           +QY +S TC  P  + G  C T D +    +C+    C  G
Sbjct: 1   NQYVDSYTCTCPLGFSGINCQTNDEDCTETSCMNGGTCIDG 41


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 580 DVFKPK*RICDDDVELNS 527
           D F  +  IC DDV+LNS
Sbjct: 94  DRFVRQFTICFDDVDLNS 111


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 128 SITCENPALYGGYPCYTR 181
           S +CEN  LY G   Y R
Sbjct: 207 SQSCENATLYSGDEMYFR 224


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,684
Number of Sequences: 336
Number of extensions: 4226
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)