Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0078
(809 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC106033-1|AAI06034.1| 459|Homo sapiens SMC4 protein protein. 31 4.9
BC070161-1|AAH70161.1| 459|Homo sapiens SMC4 protein protein. 31 4.9
BC065259-1|AAH65259.1| 423|Homo sapiens SMC4 protein protein. 31 4.9
BC001557-1|AAH01557.1| 459|Homo sapiens SMC4 protein protein. 31 4.9
AF092564-1|AAC72361.1| 1202|Homo sapiens chromosome-associated p... 31 4.9
AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated p... 31 4.9
X02865-1|CAA26617.1| 518|Homo sapiens protein ( Human mRNA frag... 30 8.6
M62486-1|AAA36506.1| 597|Homo sapiens C4b-binding protein alpha... 30 8.6
M31452-1|AAA36507.1| 597|Homo sapiens C4b-binding protein alpha... 30 8.6
BC033805-1|AAH33805.1| 548|Homo sapiens solute carrier family 2... 30 8.6
BC022312-1|AAH22312.1| 597|Homo sapiens complement component 4 ... 30 8.6
BC017963-1|AAH17963.1| 235|Homo sapiens SLC22A7 protein protein. 30 8.6
AY392950-1|AAS85890.1| 139|Homo sapiens immunoglobulin heavy ch... 30 8.6
AY050498-1|AAL12496.1| 548|Homo sapiens organic anion transport... 30 8.6
AL583834-4|CAI14464.1| 546|Homo sapiens solute carrier family 2... 30 8.6
AL583834-3|CAI14463.1| 548|Homo sapiens solute carrier family 2... 30 8.6
AL583834-2|CAI14462.1| 539|Homo sapiens solute carrier family 2... 30 8.6
AL583834-1|CAI14461.1| 278|Homo sapiens solute carrier family 2... 30 8.6
AL445493-10|CAH70782.1| 597|Homo sapiens complement component 4... 30 8.6
AF210455-1|AAG43523.1| 539|Homo sapiens organic anion transport... 30 8.6
AF097518-1|AAD37091.1| 548|Homo sapiens liver-specific transpor... 30 8.6
>BC106033-1|AAI06034.1| 459|Homo sapiens SMC4 protein protein.
Length = 459
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 782 RSPALGIEFNEHVVINGQGSYYAEHAVRDRSEHDRGRRPYLSDI 651
RS + ++ N +++ G+ A + ++EHD G YL DI
Sbjct: 214 RSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDI 257
>BC070161-1|AAH70161.1| 459|Homo sapiens SMC4 protein protein.
Length = 459
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 782 RSPALGIEFNEHVVINGQGSYYAEHAVRDRSEHDRGRRPYLSDI 651
RS + ++ N +++ G+ A + ++EHD G YL DI
Sbjct: 214 RSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDI 257
>BC065259-1|AAH65259.1| 423|Homo sapiens SMC4 protein protein.
Length = 423
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 782 RSPALGIEFNEHVVINGQGSYYAEHAVRDRSEHDRGRRPYLSDI 651
RS + ++ N +++ G+ A + ++EHD G YL DI
Sbjct: 214 RSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDI 257
>BC001557-1|AAH01557.1| 459|Homo sapiens SMC4 protein protein.
Length = 459
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 782 RSPALGIEFNEHVVINGQGSYYAEHAVRDRSEHDRGRRPYLSDI 651
RS + ++ N +++ G+ A + ++EHD G YL DI
Sbjct: 214 RSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDI 257
>AF092564-1|AAC72361.1| 1202|Homo sapiens chromosome-associated
protein-C protein.
Length = 1202
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 782 RSPALGIEFNEHVVINGQGSYYAEHAVRDRSEHDRGRRPYLSDI 651
RS + ++ N +++ G+ A + ++EHD G YL DI
Sbjct: 128 RSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDI 171
>AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated
polypeptide-C protein.
Length = 1288
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 782 RSPALGIEFNEHVVINGQGSYYAEHAVRDRSEHDRGRRPYLSDI 651
RS + ++ N +++ G+ A + ++EHD G YL DI
Sbjct: 214 RSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDI 257
>X02865-1|CAA26617.1| 518|Homo sapiens protein ( Human mRNA
fragment for C4b-binding protein (C4BP). ).
Length = 518
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +3
Query: 309 SSVYNFEAMDLKYRCTVPECEEDPHKNNYTIPHETDGTLAKCTRYAPFENGTLNGTHCSP 488
SSV + +A D K+ + P CE + N IPH + T + T+ + GT+ C P
Sbjct: 197 SSVIHCDA-DSKWNPSPPACEPNSCINLPDIPHASWETYPRPTKEDVYVVGTVLRYRCHP 255
Query: 489 HYFDTS 506
Y T+
Sbjct: 256 GYKPTT 261
>M62486-1|AAA36506.1| 597|Homo sapiens C4b-binding protein alpha
chain protein.
Length = 597
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +3
Query: 309 SSVYNFEAMDLKYRCTVPECEEDPHKNNYTIPHETDGTLAKCTRYAPFENGTLNGTHCSP 488
SSV + +A D K+ + P CE + N IPH + T + T+ + GT+ C P
Sbjct: 276 SSVIHCDA-DSKWNPSPPACEPNSCINLPDIPHASWETYPRPTKEDVYVVGTVLRYRCHP 334
Query: 489 HYFDTS 506
Y T+
Sbjct: 335 GYKPTT 340
>M31452-1|AAA36507.1| 597|Homo sapiens C4b-binding protein alpha
chain protein.
Length = 597
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +3
Query: 309 SSVYNFEAMDLKYRCTVPECEEDPHKNNYTIPHETDGTLAKCTRYAPFENGTLNGTHCSP 488
SSV + +A D K+ + P CE + N IPH + T + T+ + GT+ C P
Sbjct: 276 SSVIHCDA-DSKWNPSPPACEPNSCINLPDIPHASWETYPRPTKEDVYVVGTVLRYRCHP 334
Query: 489 HYFDTS 506
Y T+
Sbjct: 335 GYKPTT 340
>BC033805-1|AAH33805.1| 548|Homo sapiens solute carrier family 22
(organic anion transporter), member 7 protein.
Length = 548
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 264 NYTLILFPVFLAGMYSSVYNFEAMDLKYRCTVPECEED-PHKNNYT---IPHETDGTLAK 431
N L+ P L ++ + F A +RC +P + H++ + +P E DGTL+
Sbjct: 20 NVALLALPRVLLPLHFLLPIFLAAVPAHRCALPGAPANFSHQDVWLEAHLPREPDGTLSS 79
Query: 432 CTRYA 446
C R+A
Sbjct: 80 CLRFA 84
>BC022312-1|AAH22312.1| 597|Homo sapiens complement component 4
binding protein, alpha protein.
Length = 597
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +3
Query: 309 SSVYNFEAMDLKYRCTVPECEEDPHKNNYTIPHETDGTLAKCTRYAPFENGTLNGTHCSP 488
SSV + +A D K+ + P CE + N IPH + T + T+ + GT+ C P
Sbjct: 276 SSVIHCDA-DSKWNPSPPACEPNSCINLPDIPHASWETYPRPTKEDVYVVGTVLRYRCHP 334
Query: 489 HYFDTS 506
Y T+
Sbjct: 335 GYKPTT 340
>BC017963-1|AAH17963.1| 235|Homo sapiens SLC22A7 protein protein.
Length = 235
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 264 NYTLILFPVFLAGMYSSVYNFEAMDLKYRCTVPECEED-PHKNNYT---IPHETDGTLAK 431
N L+ P L ++ + F A +RC +P + H++ + +P E DGTL+
Sbjct: 20 NVALLALPRVLLPLHFLLPIFLAAVPAHRCALPGAPANFSHQDVWLEAHLPREPDGTLSS 79
Query: 432 CTRYA 446
C R+A
Sbjct: 80 CLRFA 84
>AY392950-1|AAS85890.1| 139|Homo sapiens immunoglobulin heavy chain
protein.
Length = 139
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -1
Query: 251 LPNGPKILKISSTVTELFCFFSGSILNITH 162
L +GPK++K S T++ L C SGS +NI H
Sbjct: 12 LESGPKLVKPSETLS-LTCAVSGSSINIGH 40
>AY050498-1|AAL12496.1| 548|Homo sapiens organic anion transporter
2 protein.
Length = 548
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 264 NYTLILFPVFLAGMYSSVYNFEAMDLKYRCTVPECEED-PHKNNYT---IPHETDGTLAK 431
N L+ P L ++ + F A +RC +P + H++ + +P E DGTL+
Sbjct: 20 NVALLALPRVLLPLHFLLPIFLAAVPAHRCALPGAPANFSHQDVWLEAHLPREPDGTLSS 79
Query: 432 CTRYA 446
C R+A
Sbjct: 80 CLRFA 84
>AL583834-4|CAI14464.1| 546|Homo sapiens solute carrier family 22
(organic anion transporter), member 7 protein.
Length = 546
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 264 NYTLILFPVFLAGMYSSVYNFEAMDLKYRCTVPECEED-PHKNNYT---IPHETDGTLAK 431
N L+ P L ++ + F A +RC +P + H++ + +P E DGTL+
Sbjct: 20 NVALLALPRVLLPLHFLLPIFLAAVPAHRCALPGAPANFSHQDVWLEAHLPREPDGTLSS 79
Query: 432 CTRYA 446
C R+A
Sbjct: 80 CLRFA 84
>AL583834-3|CAI14463.1| 548|Homo sapiens solute carrier family 22
(organic anion transporter), member 7 protein.
Length = 548
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 264 NYTLILFPVFLAGMYSSVYNFEAMDLKYRCTVPECEED-PHKNNYT---IPHETDGTLAK 431
N L+ P L ++ + F A +RC +P + H++ + +P E DGTL+
Sbjct: 20 NVALLALPRVLLPLHFLLPIFLAAVPAHRCALPGAPANFSHQDVWLEAHLPREPDGTLSS 79
Query: 432 CTRYA 446
C R+A
Sbjct: 80 CLRFA 84
>AL583834-2|CAI14462.1| 539|Homo sapiens solute carrier family 22
(organic anion transporter), member 7 protein.
Length = 539
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 264 NYTLILFPVFLAGMYSSVYNFEAMDLKYRCTVPECEED-PHKNNYT---IPHETDGTLAK 431
N L+ P L ++ + F A +RC +P + H++ + +P E DGTL+
Sbjct: 20 NVALLALPRVLLPLHFLLPIFLAAVPAHRCALPGAPANFSHQDVWLEAHLPREPDGTLSS 79
Query: 432 CTRYA 446
C R+A
Sbjct: 80 CLRFA 84
>AL583834-1|CAI14461.1| 278|Homo sapiens solute carrier family 22
(organic anion transporter), member 7 protein.
Length = 278
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 264 NYTLILFPVFLAGMYSSVYNFEAMDLKYRCTVPECEED-PHKNNYT---IPHETDGTLAK 431
N L+ P L ++ + F A +RC +P + H++ + +P E DGTL+
Sbjct: 20 NVALLALPRVLLPLHFLLPIFLAAVPAHRCALPGAPANFSHQDVWLEAHLPREPDGTLSS 79
Query: 432 CTRYA 446
C R+A
Sbjct: 80 CLRFA 84
>AL445493-10|CAH70782.1| 597|Homo sapiens complement component 4
binding protein, alpha protein.
Length = 597
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +3
Query: 309 SSVYNFEAMDLKYRCTVPECEEDPHKNNYTIPHETDGTLAKCTRYAPFENGTLNGTHCSP 488
SSV + +A D K+ + P CE + N IPH + T + T+ + GT+ C P
Sbjct: 276 SSVIHCDA-DSKWNPSPPACEPNSCINLPDIPHASWETYPRPTKEDVYVVGTVLRYRCHP 334
Query: 489 HYFDTS 506
Y T+
Sbjct: 335 GYKPTT 340
>AF210455-1|AAG43523.1| 539|Homo sapiens organic anion transporter
2 protein.
Length = 539
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 264 NYTLILFPVFLAGMYSSVYNFEAMDLKYRCTVPECEED-PHKNNYT---IPHETDGTLAK 431
N L+ P L ++ + F A +RC +P + H++ + +P E DGTL+
Sbjct: 20 NVALLALPRVLLPLHFLLPIFLAAVPAHRCALPGAPANFSHQDVWLEAHLPREPDGTLSS 79
Query: 432 CTRYA 446
C R+A
Sbjct: 80 CLRFA 84
>AF097518-1|AAD37091.1| 548|Homo sapiens liver-specific transporter
protein.
Length = 548
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 264 NYTLILFPVFLAGMYSSVYNFEAMDLKYRCTVPECEED-PHKNNYT---IPHETDGTLAK 431
N L+ P L ++ + F A +RC +P + H++ + +P E DGTL+
Sbjct: 20 NVALLALPRVLLPLHFLLPIFLAAVPAHRCALPGAPANFSHQDVWLEAHLPREPDGTLSS 79
Query: 432 CTRYA 446
C R+A
Sbjct: 80 CLRFA 84
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,482,023
Number of Sequences: 237096
Number of extensions: 2344402
Number of successful extensions: 14769
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 13695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14769
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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