Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0078
         (809 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48716-6|CAH04739.1|  238|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z48716-5|CAA88598.2|  264|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z78414-1|CAB01669.2|  472|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AF125960-2|AAD14736.1|  478|Caenorhabditis elegans Hypothetical ...    29   5.2  
AF039053-2|AAC25877.3|  294|Caenorhabditis elegans Serpentine re...    29   5.2  
Z66521-11|CAA91398.2|  471|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z70686-6|CAA94612.1|  352|Caenorhabditis elegans Hypothetical pr...    28   9.1  
AY008130-1|AAG32083.1|  352|Caenorhabditis elegans heterotrimeri...    28   9.1  

>Z48716-6|CAH04739.1|  238|Caenorhabditis elegans Hypothetical
           protein F59B10.4b protein.
          Length = 238

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 258 IWNYTLILFPVFLAGMYSSVYNFEAMDLKYRCTVPECEEDPHKN 389
           +W   L+LF +FL  +    Y   A DL+    V + +E PH++
Sbjct: 75  VWKCVLLLFLLFLGCISVDAYQVPATDLE-EAHVSQPQEQPHRS 117


>Z48716-5|CAA88598.2|  264|Caenorhabditis elegans Hypothetical
           protein F59B10.4a protein.
          Length = 264

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 258 IWNYTLILFPVFLAGMYSSVYNFEAMDLKYRCTVPECEEDPHKN 389
           +W   L+LF +FL  +    Y   A DL+    V + +E PH++
Sbjct: 101 VWKCVLLLFLLFLGCISVDAYQVPATDLE-EAHVSQPQEQPHRS 143


>Z78414-1|CAB01669.2|  472|Caenorhabditis elegans Hypothetical
           protein W09D12.1 protein.
          Length = 472

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 663 LVRYQSGQWNRYEEAGIVDVPTSERFQSWQARSNSL 556
           L+R+QS     Y  +G VDVPT  +   W+  +N +
Sbjct: 70  LIRFQSAFL--YYSSGDVDVPTQAKMNEWRCANNDM 103


>AF125960-2|AAD14736.1|  478|Caenorhabditis elegans Hypothetical
           protein T12B3.2 protein.
          Length = 478

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 607 VHNAGFFISIPLTGLISDKYGRRPRSCSLRSRTACS 714
           V   G  I   L G +SD++GRRP    + S   CS
Sbjct: 91  VQYVGVLIGTLLFGSLSDRFGRRPIGILVISNAICS 126


>AF039053-2|AAC25877.3|  294|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 20 protein.
          Length = 294

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +3

Query: 252 INIWNYTLI-LFPVFLAGMYSSVYNFEAM 335
           I+I N TL   FP+FLA   S  +NF+++
Sbjct: 215 IDIGNVTLFEFFPIFLANQLSKYFNFKSL 243


>Z66521-11|CAA91398.2|  471|Caenorhabditis elegans Hypothetical
           protein W02B12.7 protein.
          Length = 471

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = -3

Query: 615 IVDVPTSERFQSWQARSNSLTMLCSSK*TNESHSILLKCRSSEANNAYRLGYR 457
           +VD+  SER +  QAR    T L +    N+S S L KC  ++      + YR
Sbjct: 363 LVDLAGSERAKETQARGKQFTELTN---INQSLSTLKKCIRAQMTKMSHVPYR 412


>Z70686-6|CAA94612.1|  352|Caenorhabditis elegans Hypothetical
           protein R10H10.5 protein.
          Length = 352

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +3

Query: 612 QCRLLHIDSTDRTDIGQVRPAAAIVFASVANGVFGIIRAL 731
           Q R+LH D   + D+  +RP   +V+++  + +  I+RA+
Sbjct: 52  QMRILHKDGFSQQDLEMIRP---VVYSNCIHSMLSILRAM 88


>AY008130-1|AAG32083.1|  352|Caenorhabditis elegans heterotrimeric G
           protein alphasubunit protein.
          Length = 352

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +3

Query: 612 QCRLLHIDSTDRTDIGQVRPAAAIVFASVANGVFGIIRAL 731
           Q R+LH D   + D+  +RP   +V+++  + +  I+RA+
Sbjct: 52  QMRILHKDGFSQQDLEMIRP---VVYSNCIHSMLSILRAM 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,092,627
Number of Sequences: 27780
Number of extensions: 386718
Number of successful extensions: 1068
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)