Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0078
         (809 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    28   0.12 
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   2.5  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   2.5  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   2.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.5  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   3.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   3.3  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   7.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   7.7  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 525 ESHSILLKCRSSEANNAYRLGYRSQTERT 439
           E  S LLK R S  +NAY+ G+   T+RT
Sbjct: 3   ELASQLLKSRESLLSNAYKQGFCQPTQRT 31


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 261 WNYTLILFPVFLAGMYSSVYNFEAMDLK 344
           WN+  +L P FL G Y ++ +  +  +K
Sbjct: 70  WNWNTLLRPNFLDGWYQTLQSAISAHMK 97


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 261 WNYTLILFPVFLAGMYSSVYNFEAMDLK 344
           WN+  +L P FL G Y ++ +  +  +K
Sbjct: 70  WNWNTLLRPNFLDGWYQTLQSAISAHMK 97


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 261 WNYTLILFPVFLAGMYSSVYNFEAMDLK 344
           WN+  +L P FL G Y ++ +  +  +K
Sbjct: 70  WNWNTLLRPNFLDGWYQTLQSAISAHMK 97


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 390 NYTIPHETDGTLAKCTRYAPFENGTLNGTHCSPHYFDTST 509
           NYTIP E    +A+  R   FE+  ++ T    H  D ++
Sbjct: 375 NYTIPKEKHVEVARLIRNYYFESNKIDETTLK-HLIDVAS 413


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 390 NYTIPHETDGTLAKCTRYAPFENGTLNGTHCSPHYFDTST 509
           NYTIP E    +A+  R   FE+  ++ T    H  D ++
Sbjct: 375 NYTIPKEKHVEVARLIRNYYFESNKIDETTLK-HLIDVAS 413


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 261 WNYTLILFPVFLAGMYSSV 317
           WN+  +L P FL G Y ++
Sbjct: 26  WNWNTLLRPNFLDGWYQTL 44


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 345 YRCTVPECEEDPHKNNYTIPHETDGTLAKCTRYAPFEN 458
           ++C  P     P+  NYT    T+  L K  +   FEN
Sbjct: 434 FQCRYPNASVTPYNKNYTKFCSTEKRLTK--QNTAFEN 469


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 318 RQTNTFRRGKPGT 280
           R+TNT RRG  G+
Sbjct: 84  RRTNTLRRGSDGS 96


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 318 RQTNTFRRGKPGT 280
           R+TNT RRG  G+
Sbjct: 532 RRTNTLRRGSDGS 544


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,286
Number of Sequences: 438
Number of extensions: 5634
Number of successful extensions: 34
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)