Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0076
         (776 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9NKU6 Cluster: Putative uncharacterized protein; n=3; ...    36   1.5  
UniRef50_A0Q659 Cluster: Kinase-like protein; n=17; Francisella ...    34   4.6  
UniRef50_Q17DR7 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  

>UniRef50_Q9NKU6 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 1022

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 14/48 (29%), Positives = 29/48 (60%)
 Frame = +1

Query: 19  VVQTRRHLGLRLTSLLQSVSLFFILVFYIDIFSNTFDLVIYNRKNFYL 162
           V+ TR HLGL L     + + ++++ ++++ FS++F  +    K FY+
Sbjct: 725 VLDTRDHLGLFLIGSYMTFASYYMIYYFLERFSDSFRRIASQDKKFYI 772


>UniRef50_A0Q659 Cluster: Kinase-like protein; n=17; Francisella
           tularensis|Rep: Kinase-like protein - Francisella
           tularensis subsp. novicida (strain U112)
          Length = 167

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -1

Query: 557 YLARAWPHVRCVKGYMIVYYQRWQSVHLDKKMLLIC 450
           YL +A+P     +GY +VYYQ  +++ L K +++ C
Sbjct: 40  YLKKAYPQEPTKQGYELVYYQAKENLELGKNVIIDC 75


>UniRef50_Q17DR7 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 890

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 12/52 (23%), Positives = 25/52 (48%)
 Frame = -1

Query: 338 EFCGCQWNTKSIIRFSDLPIIVQKSHCRFDNSLLICMFQFRMGISCFIKEKC 183
           + C C  +    + F D   ++++S+CR D +L  C       +  ++K+ C
Sbjct: 470 KLCNCDEHWLKELYFQDYDKLLKESYCRIDETLKYCFNASTFNVKVYMKQVC 521


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,269,905
Number of Sequences: 1657284
Number of extensions: 16027381
Number of successful extensions: 31296
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31288
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)