Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0075
(702 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 1e-48
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 1e-48
SB_56| Best HMM Match : Actin (HMM E-Value=0) 190 1e-48
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 190 1e-48
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 1e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 6e-31
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 128 4e-30
SB_54| Best HMM Match : Actin (HMM E-Value=0) 108 5e-24
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 100 2e-21
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-20
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 7e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 58 5e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 55 5e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 53 3e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.097
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.097
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.68
SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.90
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_48166| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 30 1.6
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 2.1
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 2.8
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 29 2.8
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 29 2.8
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 2.8
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_42341| Best HMM Match : DUF701 (HMM E-Value=3) 29 3.6
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 29 3.6
SB_23472| Best HMM Match : HIT (HMM E-Value=0.43) 29 4.8
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028) 29 4.8
SB_42120| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3) 29 4.8
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 29 4.8
SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5) 29 4.8
SB_12041| Best HMM Match : PHD (HMM E-Value=0.001) 29 4.8
SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.8
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2) 28 6.4
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 6.4
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 28 6.4
SB_3123| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 28 6.4
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 28 8.4
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 28 8.4
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 28 8.4
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 28 8.4
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 28 8.4
SB_10147| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 8.4
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 8.4
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 28 8.4
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 28 8.4
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 28 8.4
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 8.4
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 190 bits (462), Expect = 1e-48
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +3
Query: 246 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 425
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 426 APLNPKANREKMTQIMFETFNTPAMYVA 509
APLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVA 136
Score = 131 bits (316), Expect = 6e-31
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = +2
Query: 509 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 688
IQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTE
Sbjct: 137 IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTE 196
Query: 689 RGYS 700
RGYS
Sbjct: 197 RGYS 200
Score = 105 bits (253), Expect = 3e-23
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +1
Query: 103 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 255
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 190 bits (462), Expect = 1e-48
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +3
Query: 246 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 425
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 426 APLNPKANREKMTQIMFETFNTPAMYVA 509
APLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVA 135
Score = 132 bits (318), Expect = 3e-31
Identities = 62/64 (96%), Positives = 64/64 (100%)
Frame = +2
Query: 509 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 688
IQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE
Sbjct: 136 IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 195
Query: 689 RGYS 700
RGYS
Sbjct: 196 RGYS 199
Score = 103 bits (246), Expect = 2e-22
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 255
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 190 bits (462), Expect = 1e-48
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +3
Query: 246 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 425
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 426 APLNPKANREKMTQIMFETFNTPAMYVA 509
APLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVA 135
Score = 132 bits (318), Expect = 3e-31
Identities = 62/64 (96%), Positives = 64/64 (100%)
Frame = +2
Query: 509 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 688
IQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE
Sbjct: 136 IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 195
Query: 689 RGYS 700
RGYS
Sbjct: 196 RGYS 199
Score = 104 bits (249), Expect = 8e-23
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 255
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 190 bits (462), Expect = 1e-48
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +3
Query: 246 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 425
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 426 APLNPKANREKMTQIMFETFNTPAMYVA 509
APLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVA 136
Score = 132 bits (318), Expect = 3e-31
Identities = 62/64 (96%), Positives = 64/64 (100%)
Frame = +2
Query: 509 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 688
IQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE
Sbjct: 137 IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 196
Query: 689 RGYS 700
RGYS
Sbjct: 197 RGYS 200
Score = 110 bits (264), Expect = 1e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +1
Query: 103 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 255
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 190 bits (462), Expect = 1e-48
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +3
Query: 246 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 425
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 426 APLNPKANREKMTQIMFETFNTPAMYVA 509
APLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVA 136
Score = 105 bits (253), Expect = 3e-23
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +1
Query: 103 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 255
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 67.7 bits (158), Expect = 9e-12
Identities = 33/37 (89%), Positives = 35/37 (94%), Gaps = 2/37 (5%)
Frame = +2
Query: 509 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 613
IQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 137 IQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 131 bits (316), Expect = 6e-31
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = +2
Query: 509 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 688
IQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTE
Sbjct: 99 IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTE 158
Query: 689 RGYS 700
RGYS
Sbjct: 159 RGYS 162
Score = 104 bits (249), Expect = 8e-23
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 255
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +3
Query: 246 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 374
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 35.5 bits (78), Expect = 0.042
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 447 NREKMTQIMFETFNTPAMYVA 509
N + M +IMFETFN+PAMYVA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVA 98
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 128 bits (309), Expect = 4e-30
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = +2
Query: 509 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 688
IQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TE
Sbjct: 15 IQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTE 74
Query: 689 RGYS 700
RGYS
Sbjct: 75 RGYS 78
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 468 IMFETFNTPAMYVA 509
IMFE FN+PA+YVA
Sbjct: 1 IMFEAFNSPAVYVA 14
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 108 bits (259), Expect = 5e-24
Identities = 47/64 (73%), Positives = 56/64 (87%)
Frame = +2
Query: 509 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 688
+QAV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TE
Sbjct: 2181 VQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTE 2240
Query: 689 RGYS 700
RGYS
Sbjct: 2241 RGYS 2244
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/52 (67%), Positives = 42/52 (80%)
Frame = +3
Query: 354 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 509
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVA 2180
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 127 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 228
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 99.5 bits (237), Expect = 2e-21
Identities = 42/63 (66%), Positives = 57/63 (90%)
Frame = +2
Query: 509 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 688
+QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L +
Sbjct: 162 MQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRK 221
Query: 689 RGY 697
G+
Sbjct: 222 EGH 224
Score = 60.9 bits (141), Expect = 1e-09
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +3
Query: 402 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 509
+HPVLLTEAPLNP+ NREK ++ FETFN PA++++
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFIS 161
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 96.3 bits (229), Expect = 2e-20
Identities = 41/64 (64%), Positives = 53/64 (82%)
Frame = +2
Query: 509 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 688
IQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++
Sbjct: 140 IQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLL 199
Query: 689 RGYS 700
RGY+
Sbjct: 200 RGYA 203
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Frame = +3
Query: 225 SGRDGRYGTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 401
S + G +D VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 402 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 509
VLLTE PLNP NREKM ++MFE + +Y+A
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIA 139
Score = 44.4 bits (100), Expect = 9e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 121 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 219
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 61.3 bits (142), Expect = 7e-10
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +3
Query: 312 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 491
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 492 PAMYV 506
PA ++
Sbjct: 63 PAFFL 67
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +2
Query: 515 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 688
+VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T ++ E
Sbjct: 71 SVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 112 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 228
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 58.4 bits (135), Expect = 5e-09
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +2
Query: 548 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 691
TG V+DSGDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLRER 109
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/55 (45%), Positives = 32/55 (58%)
Frame = +3
Query: 255 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 419
D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 283 DFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 548 TGIVLDSGDGVSHTVPI 598
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 512 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 688
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 689 RGYS 700
RG++
Sbjct: 827 RGHN 830
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 97 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 243
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 225 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 109
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 34.3 bits (75), Expect = 0.097
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = +3
Query: 426 APLNPKANREKMTQIMFETFNTPAMYVASKPCSRCTRPVVPPVSCWTPATVSPTPCPSTR 605
A P A + + +NTP ++S P P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMPPISSTPYQ--APPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 606 DTHSP 620
P
Sbjct: 946 QPQPP 950
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.3 bits (75), Expect = 0.097
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 261 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 383
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 115 EVAALVVDNGSGMCKAGFAGDDAPRAV 195
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Frame = +3
Query: 237 GRYGTEDS---YVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 398
GR G DS VG++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 399 EEHPVLLTEAPLNPKANRE 455
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 33.1 bits (72), Expect = 0.22
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +3
Query: 390 VAPEEHPVLLTEAPLNPKANREKMTQI--MFETFNTPAMYVASKPCSRCTRPVVPPVSCW 563
V P++ P + PL K ++E T + + +TP + S+P S TR +
Sbjct: 559 VVPKKIPYIPALRPLTTKPHKEFTTHLHCILSALSTPVLNT-SRPKSARTRAWSVSPRLY 617
Query: 564 TPATVSPTPCPSTRDTHSPTPS 629
TP +++P S R T S PS
Sbjct: 618 TPKSITPKFILSPRQTLSAPPS 639
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.9 bits (69), Expect = 0.52
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = -2
Query: 317 DGVFEGQDTSFALCLISYIRVFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPL 138
DG F+L L + IR + + W GNT R PAKPAL++P P
Sbjct: 41 DGEMRAILNDFSLPLDAKIRHYNRVSNQYLKWLQQLKDGGNTNRRTRIPAKPALNLPSPP 100
Query: 137 STT 129
S T
Sbjct: 101 SKT 103
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 31.5 bits (68), Expect = 0.68
Identities = 22/85 (25%), Positives = 34/85 (40%)
Frame = +3
Query: 381 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVASKPCSRCTRPVVPPVSC 560
E VAPE + E+ + PK + T ET P VAS+ + V P +
Sbjct: 3760 ETTVAPET--TIAPESTVAPKTTTQPETTAARETIAVPETTVASETTAASDTTVAPETTV 3817
Query: 561 WTPATVSPTPCPSTRDTHSPTPSCV 635
TV+P + T +P + +
Sbjct: 3818 VPEITVAPETTAAADTTMAPETTAI 3842
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 200 GNTARGASSPAKPALHIPEPLSTT 129
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 31.1 bits (67), Expect = 0.90
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +3
Query: 408 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVASKPCSRCTRPVV---PPVSCWTPATV 578
P L+T PL +T NTP + + P T P+V PP+ TP V
Sbjct: 34 PSLVTTTPLLVTTTPSLVTTTPLLVTNTPPLDTTTLPLVTITPPLVITAPPLVTTTPPLV 93
Query: 579 SPTP--CPSTRDTHSPTPSCVWT*P 647
+ TP +T + TP V T P
Sbjct: 94 TTTPLLVTTTPFLVTTTPPLVTTTP 118
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = -2
Query: 284 ALCLISYIRVFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTT 129
+L L + IR + + P W GNT R PAKP+L++P P S T
Sbjct: 512 SLPLDAKIRHYNRLSNQYPKWLQQVKDGGNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = -1
Query: 273 HLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 157
H++ K+++SH +HH ++ + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = +3
Query: 528 CTRPVVPPVSCWTPATVSPTPC-----PSTRDTHSP 620
CT+ +P +TP T TPC PST +H+P
Sbjct: 859 CTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +3
Query: 462 TQIMFETFNTPAMYVASKPCSRCTRPVVPPVSCWTPATVSPTPCPS--TRDTHSPTP 626
+Q+ E +N P+ ++ + CT +P +TP T TP T T TP
Sbjct: 611 SQVNSERYNAPSQSPCTERYTPCTERYIPCTERYTPCTERYTPSTERYTPSTERYTP 667
>SB_48166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +3
Query: 453 EKMTQIMFETFNTPAMYVASKPCSR----CTRPVVPP-VSCWTPATVSPTPC 593
+K T + F TP++ + P S T P VPP V+ P T +P PC
Sbjct: 188 DKQTDVCHLIFPTPSLGTQAPPPSTGGVTLTTPTVPPRVASTEPTTFTPKPC 239
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/74 (27%), Positives = 27/74 (36%)
Frame = +3
Query: 408 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVASKPCSRCTRPVVPPVSCWTPATVSPT 587
P T P P T +T TP + P P P + TP T +PT
Sbjct: 29 PTPTTHTPTKPSPTTPTSTAPT-QTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Query: 588 PCPSTRDTHSPTPS 629
T+ T + TP+
Sbjct: 88 TSTLTKPTPATTPT 101
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 480 TFNTPAMYVASKPCSRCTRPVVPPVSCWTPATVSPT 587
T TP + +KP + P P + TP T +PT
Sbjct: 113 TTPTPTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +3
Query: 489 TPAMYVASKPCSRCT-RPVVPPVSCWTPATVSPTPCPSTRDT-HSPTPS 629
TP +KP T P P + TP T +PT T+ T +PTP+
Sbjct: 85 TPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPT 133
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 477 ETFNTPAMYVASKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 623
+T TPA + P + P ++ TPAT TP T H+PT
Sbjct: 66 QTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTP-TPTKPTPTAHTPT 113
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -1
Query: 648 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 511
P+ + +W P T W +PSP+ T P ++T+W
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSW 138
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 648 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 511
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 648 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 511
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +1
Query: 484 STRPPCTSHPSRALAVR--VRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRP 657
+T P + S ++R R R R G R+ P + G TPP+ PA+
Sbjct: 922 ATGEPISRKKSLKKSIRDSFRRLRRSRKGTRKGDTPRKEGEAGAATPPQSPAAAPQSPPV 981
Query: 658 HRLPHE 675
RL HE
Sbjct: 982 QRLVHE 987
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 11/77 (14%)
Frame = +3
Query: 420 TEAPLNPKANR---EKMTQIMFETFNTPAMYVASKPCSRCTRPVVPPVSCWTPATV---- 578
TEA +PKAN+ +K + + + A + PC+ P PPV PA +
Sbjct: 1336 TEAGKHPKANKVGKDKHNKGTKKCYGACAPPPMADPCATMAAPCAPPVMMAAPAPMLAPM 1395
Query: 579 ---SPTPC-PSTRDTHS 617
P PC P THS
Sbjct: 1396 LAPMPAPCAPPECHTHS 1412
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 516 PCSRCTRPVVPPVSCWTPATVSPTP-CPSTRDTHSPTPS 629
P +R P+ PP C + V PTP S++ + SP+PS
Sbjct: 325 PTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 528 CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 629
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +3
Query: 516 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 629
P + TRP VP +T PTP P T P P+
Sbjct: 927 PPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
>SB_42341| Best HMM Match : DUF701 (HMM E-Value=3)
Length = 651
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/80 (22%), Positives = 30/80 (37%)
Frame = +3
Query: 333 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAS 512
TN+ + +W H + P V L + + P N E + ++ F +
Sbjct: 496 TNFSESRCVWLHKEEQQTTHRPSRQVVTLVDYAVCPFVNHEVLVKVHL-LFEERCAVLVG 554
Query: 513 KPCSRCTRPVVPPVSCWTPA 572
C R RP P+ +PA
Sbjct: 555 GSCRRGCRPRRAPLVALSPA 574
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = +3
Query: 480 TFNTPAMYVASKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 629
T T A + P + T P P + TP T + TP +P P+
Sbjct: 123 TAPTTAATTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_23472| Best HMM Match : HIT (HMM E-Value=0.43)
Length = 168
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 273 HLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 44 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 80
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +3
Query: 468 IMFETFNTPAMYVASKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 638
+ F P V +KP + T P P T TV PT PS D T C W
Sbjct: 1685 VEFVVGTCPITPVNAKPTNPWTTPAPSP----TATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028)
Length = 252
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 273 HLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 89 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 125
>SB_42120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 69
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 500 VRRIQAVLSLYASGRTTGIVLDSGDGVSHTVP 595
V R++A LS++ +GRT ++L S SH+ P
Sbjct: 1 VPRLRACLSVWMAGRTPNLMLQSRTDDSHSPP 32
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 273 HLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 673 HIIFHDIMNHIDTHNILV-----KFQHGFRRFFSCETQLITT 709
>SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3)
Length = 713
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 504 VASKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 626
+ +PC T P PP + W+P + P P D PTP
Sbjct: 232 ITQEPCFTKTEPPAPPSNYWSP-PMQPMQQP---DQEQPTP 268
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 273 HLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 292 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 328
>SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5)
Length = 276
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 504 VASKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 626
+ +PC T P PP + W+P + P P D PTP
Sbjct: 166 ITQEPCFTKTEPPAPPSNYWSP-PMQPMQQP---DQEQPTP 202
>SB_12041| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 560
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 273 HLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 503 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 539
>SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 979
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 273 HLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 129 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 165
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 387 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVASKPCSRCTRPVVPPVSCWT 566
++A + +P + E N K + +K+ Q M +T +Y K R + W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMTL--LYNMPK----IMRKFAFELPNWA 919
Query: 567 PATVSPTPCPSTRDTHSP-TPSCV 635
P PT P+ + T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2)
Length = 694
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -1
Query: 582 ETPSPESSTIPVVRPDAYSESTAWMRRTWRAC*MFRT*SGSSSLC 448
ETP+P + P PDA TAW+ R FRT S S C
Sbjct: 169 ETPTPALESAPAAMPDA--TDTAWVTAKARLY-FFRTCRPSPSRC 210
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +3
Query: 489 TPAMYVASKPCSRCTRPVVPPV-SCWTPATVS-PTPCPS---TRDTHSPTPS 629
TP+ Y ++P T P PP S + P S P PS T ++ PTPS
Sbjct: 189 TPSSYPPTQPSYPPTAPSYPPTPSSYPPIAASYPPTAPSYNPTAPSYPPTPS 240
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 200 GNTARGASSPAKPALHIPEPLSTT 129
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 200 GNTARGASSPAKPALHIPEPLSTT 129
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 583 PHRAHLRGIRTPPR-HPASGLSRSRPHRLPHEDPH 684
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 531 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 635
T VVPP+ P V P+P + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPLTQP-EVESPTPSCI 236
>SB_3123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 444 ANREKMTQIMFETFNTPAMYVASKPCSRCTRPVVPPVSCWT 566
A++ K FE F T A++ +P +R VVPP+S T
Sbjct: 2 ADQIKSNLEAFEHFGTLAIHAGQEPEKWTSRAVVPPISLST 42
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +3
Query: 420 TEAP---LNPKANREKMTQIMFETFNTPAMYVASKPCSRCTRPVVPPVSCWTPATVSPTP 590
T+AP L PK T + ET + PA+ +A + + V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 591 CPSTRDTHSP 620
+T T +P
Sbjct: 575 TAATEITAAP 584
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 582 ETPSPESSTIPVVRPDAYSESTAWMR 505
ETP+PE + P PDA TAW R
Sbjct: 154 ETPTPELESAPAAMPDA--TDTAWDR 177
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/92 (28%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Frame = +3
Query: 366 HTFYNELRVAP--EEHPVLLTEAPLNPKAN--REKMTQIMFETFNTPAMYVASKPCSRCT 533
HT N AP HP L P+A M + ET P M S +
Sbjct: 276 HTISNPAMAAPWVTPHPATLPVTLFTPQAAPVTPPMGAQLPET-EQPQMVAPSSTVTPPV 334
Query: 534 RPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 629
PP S P PTP + +P PS
Sbjct: 335 TEPAPPSSVVAPPPAVPTPATAPPPVVAPPPS 366
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +3
Query: 399 EEHPVLLTEAPLNPKANREKMTQIMF-ETFNTPAMYVASKPCSRCTRPVVPPVSCWTPAT 575
EEH ++ T N ++ + MF E +TP + S + P P+S TP+
Sbjct: 2034 EEHVMMETTLHHNNQSMCVPVESGMFREKHHTPPSAHSYGTSSYDSSPQKLPISYLTPSP 2093
Query: 576 VSPTPCPSTRDTHSPTPSC 632
SP S+ +HS +C
Sbjct: 2094 ESPKDWSSSPSSHSDWSNC 2112
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 592 HGVGDTVAGVQHDTGGTTGRVQREHGLDAT 503
HG+ T + HD TT R+ HG+D T
Sbjct: 43 HGIDTTATRIHHDIVTTTTRI--HHGIDTT 70
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 592 HGVGDTVAGVQHDTGGTTGRVQREHGLDAT 503
HG+ T + HD TT R+ HG+D T
Sbjct: 512 HGIDTTATRIHHDIVTTTTRI--HHGIDTT 539
>SB_10147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Frame = +1
Query: 496 PCTSH---PSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRPHRL 666
PC SH P LA R R R L HR I PP +PA S +RL
Sbjct: 46 PCCSHRPQPLSILATNPTGCAASRYRQRLRALIHRTSAHAIPNPPFYPAIN-SNEHTYRL 104
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 513 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSC 632
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 291 LFCSVPHLLHKSLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 148
L C ++ +LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,219,457
Number of Sequences: 59808
Number of extensions: 634879
Number of successful extensions: 2379
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 1971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2354
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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