Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0074
         (815 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54P91 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  
UniRef50_Q22NG0 Cluster: Putative uncharacterized protein; n=2; ...    33   8.6  

>UniRef50_Q54P91 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1468

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 21/73 (28%), Positives = 31/73 (42%)
 Frame = -1

Query: 647  SKQLLFISTMVIRYKSLTIYYNRSLPFLS*NAIHFTLEAHHPYLTLRNPVTPLHGVHSIR 468
            S  L F+   +  +   TI   + L FL  N I+  L      L LRNP    H V + R
Sbjct: 871  SNFLFFLIFFIFLFFIFTIIMTKMLKFLFKNKINVELSIKQYKLNLRNPFGTAHSVTTTR 930

Query: 467  HVLLLRVNESEIQ 429
               L+ +   +I+
Sbjct: 931  TNALIEIKVEDIR 943


>UniRef50_Q22NG0 Cluster: Putative uncharacterized protein; n=2;
           Alveolata|Rep: Putative uncharacterized protein -
           Tetrahymena thermophila SB210
          Length = 2707

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +2

Query: 659 NTYLQKNCNKKLINIMMTTLISLFYVMMFNLCPNIGVCYNLN*KQINIFTR 811
           N YLQ  C   +INI+  +   L   +  +  PNI   YN N KQI ++++
Sbjct: 590 NIYLQNECQSIVINILNNSFYILLSKLHSSSQPNIS--YNQNTKQIYVYSK 638


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,901,165
Number of Sequences: 1657284
Number of extensions: 14139307
Number of successful extensions: 29177
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29166
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70789333940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)