Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0073
(739 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 123 4e-27
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 120 5e-26
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 119 6e-26
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 119 9e-26
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 118 1e-25
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 117 3e-25
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 117 3e-25
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 116 5e-25
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 112 7e-24
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 111 2e-23
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 108 1e-22
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 108 1e-22
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 107 2e-22
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 107 3e-22
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 106 5e-22
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 105 1e-21
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 99 6e-20
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 99 1e-19
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 97 5e-19
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 95 2e-18
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 95 2e-18
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 94 3e-18
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 94 4e-18
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 94 4e-18
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 91 2e-17
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 90 5e-17
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 87 6e-16
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 86 7e-16
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 82 1e-14
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 81 2e-14
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 79 1e-13
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 78 2e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 78 2e-13
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 78 3e-13
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 77 3e-13
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 77 5e-13
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 76 1e-12
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 75 2e-12
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 74 3e-12
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 74 4e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 74 4e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 74 4e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 73 6e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 73 6e-12
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 73 6e-12
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 73 1e-11
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 72 1e-11
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 72 2e-11
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 70 5e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 69 9e-11
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 69 1e-10
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 69 1e-10
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 69 2e-10
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 67 4e-10
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 67 4e-10
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 67 4e-10
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 66 6e-10
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 66 6e-10
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 66 8e-10
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 66 8e-10
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 66 1e-09
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 66 1e-09
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 65 1e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 65 1e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 64 3e-09
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 64 5e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 63 6e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 63 8e-09
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 62 2e-08
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 62 2e-08
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 61 2e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 61 2e-08
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 61 2e-08
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 61 2e-08
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 61 3e-08
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 60 4e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 60 4e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 4e-08
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 60 6e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 59 1e-07
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 59 1e-07
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 59 1e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 58 2e-07
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 57 4e-07
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 56 1e-06
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 54 4e-06
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 53 6e-06
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 51 3e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 50 5e-05
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 50 6e-05
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 50 8e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 3e-04
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 48 3e-04
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 46 7e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 0.001
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 44 0.003
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 44 0.005
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 39 0.15
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 37 0.45
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.59
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 35 2.4
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 34 4.2
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 33 5.5
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 33 7.3
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 9.7
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 9.7
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 123 bits (297), Expect = 4e-27
Identities = 58/76 (76%), Positives = 63/76 (82%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 186 LFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPE 245
Query: 691 VYILILPGFGIISHII 738
VYILILPGFGIISHI+
Sbjct: 246 VYILILPGFGIISHIV 261
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/63 (52%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 428 ISS 436
+SS
Sbjct: 158 VSS 160
Score = 56.4 bits (130), Expect = 7e-07
Identities = 35/99 (35%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXX 176
KDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 14 KDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMV 73
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N VP+++GAPD+AFPR F PP L
Sbjct: 74 MPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 120 bits (288), Expect = 5e-26
Identities = 54/76 (71%), Positives = 62/76 (81%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPE
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPE 242
Query: 691 VYILILPGFGIISHII 738
VYILI+PGFG++SHI+
Sbjct: 243 VYILIIPGFGMVSHIV 258
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 428 ISS 436
ISS
Sbjct: 155 ISS 157
Score = 58.0 bits (134), Expect = 2e-07
Identities = 38/99 (38%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 176
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N LVP+++GAPD+AFPR F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 119 bits (287), Expect = 6e-26
Identities = 57/76 (75%), Positives = 62/76 (81%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPE
Sbjct: 167 LFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPE 226
Query: 691 VYILILPGFGIISHII 738
VYILILPGFGIISH+I
Sbjct: 227 VYILILPGFGIISHMI 242
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPR 80
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/63 (49%), Positives = 35/63 (55%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 428 ISS 436
SS
Sbjct: 139 ASS 141
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 119 bits (286), Expect = 9e-26
Identities = 56/76 (73%), Positives = 61/76 (80%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 183 LFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 242
Query: 691 VYILILPGFGIISHII 738
VYILILPGFGIISH++
Sbjct: 243 VYILILPGFGIISHVV 258
Score = 73.7 bits (173), Expect = 4e-12
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 182
KDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 13 KDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 72
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR 254
N LVPL++GAPD+AFPR
Sbjct: 73 ILIGGFGNWLVPLMIGAPDMAFPR 96
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 428 ISS 436
+SS
Sbjct: 155 VSS 157
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 118 bits (285), Expect = 1e-25
Identities = 55/76 (72%), Positives = 62/76 (81%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPE
Sbjct: 191 LFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPE 250
Query: 691 VYILILPGFGIISHII 738
VYILILPGFG+ISHI+
Sbjct: 251 VYILILPGFGMISHIV 266
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 428 ISS 436
SS
Sbjct: 163 ASS 165
Score = 56.8 bits (131), Expect = 5e-07
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 176
KDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 19 KDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMV 78
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N LVP+++G+PD+AFPR F PP L
Sbjct: 79 MPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 117 bits (282), Expect = 3e-25
Identities = 56/76 (73%), Positives = 61/76 (80%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 183 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 242
Query: 691 VYILILPGFGIISHII 738
VYILILPGFG+ISHI+
Sbjct: 243 VYILILPGFGMISHIV 258
Score = 72.9 bits (171), Expect = 7e-12
Identities = 42/97 (43%), Positives = 48/97 (49%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 182
KDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 13 KDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMP 72
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N LVPL++GAPD+AFPR F PP L
Sbjct: 73 IMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 69.7 bits (163), Expect = 7e-11
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 428 ISS 436
+SS
Sbjct: 155 VSS 157
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 117 bits (281), Expect = 3e-25
Identities = 55/76 (72%), Positives = 61/76 (80%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 184 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 243
Query: 691 VYILILPGFGIISHII 738
VYILILPGFG+ISH++
Sbjct: 244 VYILILPGFGMISHVV 259
Score = 76.2 bits (179), Expect = 8e-13
Identities = 40/84 (47%), Positives = 45/84 (53%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 182
KDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 14 KDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMP 73
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR 254
N LVPL++GAPD+AFPR
Sbjct: 74 IMIGGFGNWLVPLMIGAPDMAFPR 97
Score = 73.7 bits (173), Expect = 4e-12
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 116 bits (280), Expect = 5e-25
Identities = 54/76 (71%), Positives = 61/76 (80%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 183 LFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 242
Query: 691 VYILILPGFGIISHII 738
VYILILPGFG+ISH++
Sbjct: 243 VYILILPGFGMISHVV 258
Score = 73.7 bits (173), Expect = 4e-12
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 182
KDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 13 KDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 72
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR 254
N LVPL++GAPD+AFPR
Sbjct: 73 VMIGGFGNWLVPLMIGAPDMAFPR 96
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 428 ISS 436
+SS
Sbjct: 155 VSS 157
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 112 bits (270), Expect = 7e-24
Identities = 51/76 (67%), Positives = 59/76 (77%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPE
Sbjct: 187 LFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPE 246
Query: 691 VYILILPGFGIISHII 738
VYILILPGFG++SHII
Sbjct: 247 VYILILPGFGLVSHII 262
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/63 (49%), Positives = 33/63 (52%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 428 ISS 436
I S
Sbjct: 159 IGS 161
Score = 41.1 bits (92), Expect = 0.028
Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 176
K IG LY EL PG L G+ YN I T H
Sbjct: 15 KRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVV 74
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR 254
N VP+++GAPD++FPR
Sbjct: 75 MPILFGGFGNYFVPILIGAPDMSFPR 100
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 111 bits (267), Expect = 2e-23
Identities = 50/76 (65%), Positives = 60/76 (78%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPE
Sbjct: 289 LFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPE 348
Query: 691 VYILILPGFGIISHII 738
VYI+ILP FG+ISHI+
Sbjct: 349 VYIVILPAFGVISHIV 364
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 428 ISS 436
SS
Sbjct: 261 ASS 263
Score = 36.7 bits (81), Expect = 0.59
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 108 bits (260), Expect = 1e-22
Identities = 50/76 (65%), Positives = 57/76 (75%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPE
Sbjct: 184 LFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPE 243
Query: 691 VYILILPGFGIISHII 738
VYILI+PGFGI+SHI+
Sbjct: 244 VYILIIPGFGIVSHIV 259
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P IN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 41.5 bits (93), Expect = 0.021
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 176
KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 12 KDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLA 71
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR 254
N ++PL++GA D++FPR
Sbjct: 72 MPALIGGFGNYMLPLMIGATDMSFPR 97
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 108 bits (260), Expect = 1e-22
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPE
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPE 243
Query: 691 VYILILPGFGIISHII 738
VYILI+PGFGIISH++
Sbjct: 244 VYILIIPGFGIISHVV 259
Score = 70.1 bits (164), Expect = 5e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 176
KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 12 KDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLV 71
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR 254
N L+PL++GA D AFPR
Sbjct: 72 MPALIGGFGNYLLPLMIGATDTAFPR 97
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 107 bits (258), Expect = 2e-22
Identities = 53/76 (69%), Positives = 57/76 (75%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPE
Sbjct: 184 LFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPE 243
Query: 691 VYILILPGFGIISHII 738
VYILI+PGFGIIS I
Sbjct: 244 VYILIIPGFGIISTTI 259
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+G
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSG 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 52.8 bits (121), Expect = 8e-06
Identities = 31/85 (36%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 179
KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 13 KDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVM 72
Query: 180 XXXXXXXXN*LVPLILGAPDIAFPR 254
N L+PL LG PD+ FPR
Sbjct: 73 PALIGGFGNFLLPLGLGGPDMGFPR 97
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 107 bits (257), Expect = 3e-22
Identities = 51/76 (67%), Positives = 58/76 (76%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPE
Sbjct: 226 LFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPE 285
Query: 691 VYILILPGFGIISHII 738
VYI+ILPGFGIIS I+
Sbjct: 286 VYIMILPGFGIISQIV 301
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 323 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
Score = 37.1 bits (82), Expect = 0.45
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 16/100 (16%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY---NT 134
KDIGTLY AEL PG + D DQ Y N
Sbjct: 37 KDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHLWNV 96
Query: 135 IVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
++TAH N VP+++GAPD+AFPR
Sbjct: 97 LITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPR 136
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 106 bits (255), Expect = 5e-22
Identities = 51/65 (78%), Positives = 53/65 (81%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPE
Sbjct: 156 LFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPE 215
Query: 691 VYILI 705
VYILI
Sbjct: 216 VYILI 220
Score = 86.6 bits (205), Expect = 6e-16
Identities = 47/88 (53%), Positives = 50/88 (56%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 428 ISSXXXXXXXXXXXXXXXXXXXSFDQLP 511
ISS SFDQ+P
Sbjct: 128 ISSILGAINFITTIINMRINKMSFDQMP 155
Score = 72.5 bits (170), Expect = 1e-11
Identities = 39/70 (55%), Positives = 42/70 (60%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 263
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 264 *DFDSYPPPL 293
F PP L
Sbjct: 73 MSFWLLPPSL 82
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 105 bits (252), Expect = 1e-21
Identities = 53/76 (69%), Positives = 58/76 (76%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPE
Sbjct: 210 LFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPE 269
Query: 691 VYILILPGFGIISHII 738
VYILI+PGFGIIS +I
Sbjct: 270 VYILIIPGFGIISTVI 285
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/63 (46%), Positives = 36/63 (57%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 428 ISS 436
ISS
Sbjct: 182 ISS 184
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 179
KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 39 KDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVM 98
Query: 180 XXXXXXXXN*LVPLILGAPDIAFPR 254
N L+P+++G PD+AFPR
Sbjct: 99 PALIGGFGNFLLPILIGGPDMAFPR 123
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 99 bits (238), Expect = 6e-20
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +1
Query: 571 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 735
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHI 347
Score = 39.1 bits (87), Expect = 0.11
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2
Query: 326 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 99.1 bits (236), Expect = 1e-19
Identities = 47/61 (77%), Positives = 50/61 (81%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP+
Sbjct: 180 LFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPK 239
Query: 691 V 693
+
Sbjct: 240 L 240
Score = 86.6 bits (205), Expect = 6e-16
Identities = 47/88 (53%), Positives = 50/88 (56%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 428 ISSXXXXXXXXXXXXXXXXXXXSFDQLP 511
ISS SFDQ+P
Sbjct: 152 ISSILGAINFITTIINMRMNNLSFDQMP 179
Score = 81.8 bits (193), Expect = 2e-14
Identities = 48/97 (49%), Positives = 50/97 (51%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 182
KDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 10 KDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMP 69
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N LVPL+LGAPD+AFPR F PP L
Sbjct: 70 IMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 96.7 bits (230), Expect = 5e-19
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = +1
Query: 580 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS I
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTI 284
Score = 59.3 bits (137), Expect = 1e-07
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 415
P +NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 416 HLAGISS 436
HL+G+SS
Sbjct: 184 HLSGVSS 190
Score = 56.8 bits (131), Expect = 5e-07
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 179
KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 41 KDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVM 100
Query: 180 XXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N L+PL++G PD+AFPR F PP L
Sbjct: 101 PALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 95.1 bits (226), Expect = 2e-18
Identities = 44/76 (57%), Positives = 55/76 (72%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPE
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPE 260
Query: 691 VYILILPGFGIISHII 738
VYILI+P FG++S I+
Sbjct: 261 VYILIVPVFGVVSQIV 276
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 428 ISS 436
+SS
Sbjct: 173 LSS 175
Score = 39.5 bits (88), Expect = 0.084
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 93 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 95.1 bits (226), Expect = 2e-18
Identities = 44/76 (57%), Positives = 55/76 (72%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPE
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPE 260
Query: 691 VYILILPGFGIISHII 738
VYILI+P FG++S I+
Sbjct: 261 VYILIVPVFGVVSQIV 276
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 428 ISS 436
+SS
Sbjct: 173 LSS 175
Score = 39.5 bits (88), Expect = 0.084
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 93 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 94.3 bits (224), Expect = 3e-18
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPE
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPE 245
Query: 691 VYILILPGFGIISHII 738
VYI++LP FG+IS I+
Sbjct: 246 VYIILLPVFGLISTIV 261
Score = 41.5 bits (93), Expect = 0.021
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 428 ISS 436
ISS
Sbjct: 158 ISS 160
Score = 38.7 bits (86), Expect = 0.15
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 99 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
G L GD Q YN ++T+H N +P++ G PD+ FPR
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPR 99
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 93.9 bits (223), Expect = 4e-18
Identities = 40/56 (71%), Positives = 48/56 (85%)
Frame = +1
Query: 571 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHIL 261
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 428 ISS 436
+SS
Sbjct: 157 MSS 159
Score = 36.7 bits (81), Expect = 0.59
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 182
KDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 15 KDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMP 74
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR 254
N +PL++ D++ PR
Sbjct: 75 TSIGGLGNWFIPLMIKIKDLSMPR 98
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 93.9 bits (223), Expect = 4e-18
Identities = 51/93 (54%), Positives = 58/93 (62%)
Frame = -1
Query: 292 KGGG*ESKSYIIYRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 113
K GG + RGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 112 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 14
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = -2
Query: 435 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 256
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 255 IVG 247
I G
Sbjct: 138 IRG 140
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = -3
Query: 668 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKVIDQM 495
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN + M
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSM 57
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 91.5 bits (217), Expect = 2e-17
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = +1
Query: 574 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+I
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVI 264
Score = 38.7 bits (86), Expect = 0.15
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLA 424
P IN+I E G GTG T+YPPLS+++ +VD+ IF L ++
Sbjct: 100 PRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVS 159
Query: 425 GISS 436
G++S
Sbjct: 160 GVAS 163
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 90.2 bits (214), Expect = 5e-17
Identities = 41/76 (53%), Positives = 52/76 (68%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
+FV +T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPE
Sbjct: 193 MFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPE 252
Query: 691 VYILILPGFGIISHII 738
VY++ILP FGIIS +
Sbjct: 253 VYVIILPVFGIISEAV 268
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 176
K IGT Y EL +PG G Q+YN+++T H
Sbjct: 22 KTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLV 81
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR 254
N ++PL+LGAP++AFPR
Sbjct: 82 MPILIGGFGNWMLPLMLGAPEMAFPR 107
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 86.6 bits (205), Expect = 6e-16
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +1
Query: 604 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVI 235
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 86.2 bits (204), Expect = 7e-16
Identities = 42/58 (72%), Positives = 44/58 (75%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 684
LFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 102 LFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 317 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 82.2 bits (194), Expect = 1e-14
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +1
Query: 523 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 702
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 703 ILPGFGIISHII 738
ILPGFGIIS ++
Sbjct: 253 ILPGFGIISLLL 264
Score = 40.7 bits (91), Expect = 0.036
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 317 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 81.4 bits (192), Expect = 2e-14
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = +1
Query: 571 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI 242
Score = 36.7 bits (81), Expect = 0.59
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 329 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/57 (68%), Positives = 42/57 (73%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 681
LFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 184 LFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 428 ISS 436
+SS
Sbjct: 156 LSS 158
Score = 68.5 bits (160), Expect = 2e-10
Identities = 38/98 (38%), Positives = 47/98 (47%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 182
KDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 14 KDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMP 73
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPLY 296
N VPL++GAPD+AFPR F PP L+
Sbjct: 74 TMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 78.2 bits (184), Expect = 2e-13
Identities = 34/54 (62%), Positives = 42/54 (77%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS +I
Sbjct: 224 ALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI 277
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/53 (71%), Positives = 40/53 (75%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 669
LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/63 (58%), Positives = 41/63 (65%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAG 137
Query: 428 ISS 436
+SS
Sbjct: 138 VSS 140
Score = 66.1 bits (154), Expect = 8e-10
Identities = 35/70 (50%), Positives = 40/70 (57%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 263
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 264 *DFDSYPPPL 293
F PP L
Sbjct: 83 MSFWFLPPSL 92
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 77.8 bits (183), Expect = 3e-13
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +1
Query: 571 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI 269
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF FFGHPE
Sbjct: 199 LFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPE 258
Query: 691 VYILILPGFGIISHII 738
VYI+ LP G++S I+
Sbjct: 259 VYIIFLPAVGMVSSIV 274
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 77.0 bits (181), Expect = 5e-13
Identities = 36/53 (67%), Positives = 40/53 (75%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 669
LFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 428 ISS 436
ISS
Sbjct: 155 ISS 157
Score = 58.0 bits (134), Expect = 2e-07
Identities = 38/99 (38%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 176
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N LVP+++GAPD+AFPR F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 75.8 bits (178), Expect = 1e-12
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = +1
Query: 571 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
Score = 37.9 bits (84), Expect = 0.26
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 96 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
PG + D + YN ++T H N L+PL++GA D+AFPR
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPR 54
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/54 (62%), Positives = 42/54 (77%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLIL 312
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/54 (62%), Positives = 43/54 (79%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I+
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLIL 268
Score = 33.5 bits (73), Expect = 5.5
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 335 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 436
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/45 (73%), Positives = 34/45 (75%)
Frame = +3
Query: 603 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYY 737
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYY
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYY 51
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYIL 343
Score = 43.2 bits (97), Expect = 0.007
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 182
KDIG LY EL +PG + + YN+++T+H
Sbjct: 95 KDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATP 154
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR 254
N L+PL++GA D+AFPR
Sbjct: 155 IIAAFS-NYLIPLLIGADDMAFPR 177
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 73.7 bits (173), Expect = 4e-12
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIV 419
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 73.3 bits (172), Expect = 6e-12
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 182
KDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 2 KDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 61
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR 254
N L+PL++GAPD+AFPR
Sbjct: 62 IMIGGFGNWLIPLMIGAPDMAFPR 85
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 143
Query: 428 ISS 436
ISS
Sbjct: 144 ISS 146
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/40 (60%), Positives = 26/40 (65%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 630
LFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 172 LFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 73.3 bits (172), Expect = 6e-12
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = +1
Query: 574 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 735
G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S +
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSEL 283
Score = 33.1 bits (72), Expect = 7.3
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL P + + D +YN + T H N L+P ++GAPD+AFP+
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPK 119
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 73.3 bits (172), Expect = 6e-12
Identities = 39/76 (51%), Positives = 45/76 (59%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV + AF A LL DR+ T FF P GGD +L+QHLF FFGHPE
Sbjct: 201 LFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPE 260
Query: 691 VYILILPGFGIISHII 738
VYILILP GIIS ++
Sbjct: 261 VYILILPTMGIISEVL 276
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/66 (53%), Positives = 44/66 (66%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTV 243
Query: 691 VYILIL 708
I++L
Sbjct: 244 ATIIML 249
Score = 70.1 bits (164), Expect = 5e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 176
KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 12 KDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLV 71
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR 254
N L+PL++GA D AFPR
Sbjct: 72 MPALIGGFGNYLLPLMIGATDTAFPR 97
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 5/61 (8%)
Frame = +1
Query: 571 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 735
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEV 267
Query: 736 I 738
I
Sbjct: 268 I 268
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 71.7 bits (168), Expect = 2e-11
Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +1
Query: 574 GAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S ++
Sbjct: 229 GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVV 284
Score = 38.7 bits (86), Expect = 0.15
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PG I D YN T H N ++PL+LGA D+AFPR
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPR 126
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 70.1 bits (164), Expect = 5e-11
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = +1
Query: 580 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
+ +++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI 267
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 428 ISS 436
ISS
Sbjct: 155 ISS 157
Score = 58.0 bits (134), Expect = 2e-07
Identities = 38/99 (38%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 176
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N LVP+++GAPD+AFPR F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 681
LFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 184 LFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 41.9 bits (94), Expect = 0.016
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 176
KDI LY EL PG L G++Q++N +V HA
Sbjct: 12 KDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMV 71
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR 254
N ++PL++GA D AFPR
Sbjct: 72 MPALIGGFGNYMLPLMIGATDTAFPR 97
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/61 (57%), Positives = 41/61 (67%), Gaps = 10/61 (16%)
Frame = +1
Query: 586 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 735
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 736 I 738
I
Sbjct: 298 I 298
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Frame = +1
Query: 532 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVY 696
+TA A +LL DR+ T FF GGGDPIL+QHLF FGHPEVY
Sbjct: 223 LTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVY 282
Query: 697 ILILPGFGIISHII 738
I+ILP +GI+ ++
Sbjct: 283 IMILPAWGILGDVL 296
Score = 32.7 bits (71), Expect = 9.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 329 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILILP GIIS +I
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI 278
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/76 (43%), Positives = 41/76 (53%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV TA + +R T FFD A GG P+L+Q LF FFGHPE
Sbjct: 181 LFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPE 240
Query: 691 VYILILPGFGIISHII 738
VYILILP G++S ++
Sbjct: 241 VYILILPAMGLVSELL 256
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = +1
Query: 589 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
+L DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII 283
Score = 33.5 bits (73), Expect = 5.5
Identities = 22/84 (26%), Positives = 32/84 (38%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 182
K +G +Y AEL PG ++ +N + T H
Sbjct: 39 KQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTP 98
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR 254
N ++PL +GAPD+AFPR
Sbjct: 99 IVWGFA-NYVLPLQIGAPDVAFPR 121
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 66.5 bits (155), Expect = 6e-10
Identities = 35/76 (46%), Positives = 44/76 (57%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
+FV AV + +F A +L DR FF A GDPIL+QHLF FFGHPE
Sbjct: 206 IFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPE 264
Query: 691 VYILILPGFGIISHII 738
VYI+ +P G++S II
Sbjct: 265 VYIIFIPALGMVSSII 280
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 66.5 bits (155), Expect = 6e-10
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +1
Query: 571 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV 260
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/66 (50%), Positives = 41/66 (62%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LF AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPE
Sbjct: 189 LFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPE 248
Query: 691 VYILIL 708
V I+ L
Sbjct: 249 VKIICL 254
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/61 (50%), Positives = 37/61 (60%)
Frame = +2
Query: 254 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 433
+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G S
Sbjct: 103 LNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFS 162
Query: 434 S 436
S
Sbjct: 163 S 163
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 176
KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR 254
N L+PL+LGA D+AF R
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMAFAR 102
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 66.1 bits (154), Expect = 8e-10
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH-- 684
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIW 260
Query: 685 PEVYILIL 708
P + I+I+
Sbjct: 261 PIIIIIII 268
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 428 ISS 436
+SS
Sbjct: 173 LSS 175
Score = 39.5 bits (88), Expect = 0.084
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 93 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 65.7 bits (153), Expect = 1e-09
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 182
KD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 14 KDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMP 73
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR 254
N LVPL++GAPD+AFPR
Sbjct: 74 IMIGGFGNWLVPLMIGAPDMAFPR 97
Score = 34.3 bits (75), Expect = 3.2
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 364
P +NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 65.7 bits (153), Expect = 1e-09
Identities = 56/181 (30%), Positives = 73/181 (40%), Gaps = 1/181 (0%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 263
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 264 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*ILLFFHYI*QVFHQL* 443
F +P +Y + K +DE TP + + + +F ++ V L
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSSILG 142
Query: 444 EXXXXXXXXXXXXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRS-KLKYII 620
C+ Y TC S SYY IIN L YII
Sbjct: 143 SYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLHYII 202
Query: 621 F 623
+
Sbjct: 203 W 203
Score = 33.1 bits (72), Expect = 7.3
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 383 GRSVDLAIFSLHLAGISS 436
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 231 ATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 729
A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 64.5 bits (150), Expect = 3e-09
Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 11/65 (16%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGI 723
A +L DR TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGI 301
Query: 724 ISHII 738
+SHI+
Sbjct: 302 VSHIL 306
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +1
Query: 586 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +I
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVI 266
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 63.3 bits (147), Expect = 6e-09
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV ++ T+ ++ ++ + FDPA GGDP+L+QH F F+ HP
Sbjct: 202 LFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPA 261
Query: 691 VYILILPGFGIISHII 738
VYI++LP +IS ++
Sbjct: 262 VYIMVLPAMAVISEVV 277
Score = 37.5 bits (83), Expect = 0.34
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PG I D YN + T H N L+P+++GA D+AFP+
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPK 119
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 62.9 bits (146), Expect = 8e-09
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 290 ATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +1
Query: 586 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATML 300
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 61.7 bits (143), Expect = 2e-08
Identities = 23/53 (43%), Positives = 38/53 (71%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 735
A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ +
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEV 267
Score = 33.5 bits (73), Expect = 5.5
Identities = 22/84 (26%), Positives = 30/84 (35%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 182
K IG +Y +L P + + YN I+T H
Sbjct: 25 KKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQ 84
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR 254
N +VPL+LGA D+A PR
Sbjct: 85 AGLTGFGNFVVPLMLGARDVALPR 108
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +1
Query: 574 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVV 303
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 598 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 61.3 bits (142), Expect = 2e-08
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 10/86 (11%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILYQ 660
L + A ITA A +L+ DR+L TSFF AG GG P+L+Q
Sbjct: 235 LTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQ 294
Query: 661 HLF*FFGHPEVYILILPGFGIISHII 738
HLF F GHPEVYI+++P GI S +I
Sbjct: 295 HLFWFLGHPEVYIVLIPALGITSEVI 320
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 428 ISS 436
+SS
Sbjct: 173 LSS 175
Score = 58.8 bits (136), Expect = 1e-07
Identities = 35/71 (49%), Positives = 44/71 (61%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP- 257
Query: 691 VYILILPGFGI 723
V ILI GI
Sbjct: 258 VLILIWLTSGI 268
Score = 39.5 bits (88), Expect = 0.084
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 93 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 60.9 bits (141), Expect = 3e-08
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPILY 657
L + A+ ITA A ++L DR + T FF P AGGG P+L+
Sbjct: 221 LTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLW 280
Query: 658 QHLF*FFGHPEVYILILPGFGIISHII 738
QHLF F+ HP VYI+ILP G++S I+
Sbjct: 281 QHLFWFYSHPAVYIMILPAMGMVSDIL 307
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 60.5 bits (140), Expect = 4e-08
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I+
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIV 258
Score = 36.3 bits (80), Expect = 0.78
Identities = 24/85 (28%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXX 179
K +G LY EL G I DD +YNT + H
Sbjct: 15 KRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQI 74
Query: 180 XXXXXXXXN*LVPLILGAPDIAFPR 254
N +PL++GA D+AFPR
Sbjct: 75 PALTGFFANYFIPLMIGAKDVAFPR 99
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +1
Query: 586 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
+L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/55 (54%), Positives = 34/55 (61%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 412
P +NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +3
Query: 516 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 683
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +2
Query: 314 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
A+ +L DR FF GG P+L+ +LF +GHPEVYI+ILP FGI S II
Sbjct: 245 ALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEII 298
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +1
Query: 586 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
+L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 735
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S +
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEV 301
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 58.0 bits (134), Expect = 2e-07
Identities = 38/99 (38%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 176
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N LVP+++GAPD+AFPR F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = +1
Query: 589 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
+ DR L+T F+ GG +LY +L +GHPEVYILILP FGI S II
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEII 297
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/99 (34%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXX 176
KDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 15 KDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMV 74
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N VP+++G+PD+AFPR F PP L
Sbjct: 75 MPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 54.0 bits (124), Expect = 4e-06
Identities = 29/66 (43%), Positives = 37/66 (56%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ FGH +
Sbjct: 16 LFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTD 75
Query: 691 VYILIL 708
V LIL
Sbjct: 76 VLFLIL 81
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +1
Query: 589 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 735
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEI 321
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 51.2 bits (117), Expect = 3e-05
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = +1
Query: 634 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
GGG P+L+QHLF F+ HP VYI++LP G++S ++
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDML 310
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 50.4 bits (115), Expect = 5e-05
Identities = 28/63 (44%), Positives = 33/63 (52%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P + N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 428 ISS 436
ISS
Sbjct: 145 ISS 147
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 50.0 bits (114), Expect = 6e-05
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +1
Query: 673 FFGHPEVYILILPGFGIISHII 738
FFGHPEVYILILPGFG+ISHI+
Sbjct: 2 FFGHPEVYILILPGFGMISHIV 23
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 49.6 bits (113), Expect = 8e-05
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1
Query: 607 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 723
L S F+P GG P+LYQ F F+ HP VY+++LP GI
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGI 271
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 519 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 671
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 356 PLSSNIAHRGRSVDLAIFSLHLAGISS 436
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 690
LFV AV A G +LL ++ S++ GG +++++LF +FGHPE
Sbjct: 213 LFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPE 271
Query: 691 VYILILPGFG 720
VY+L+LPG G
Sbjct: 272 VYLLLLPGTG 281
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 46.4 bits (105), Expect = 7e-04
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILY 657
+F ++ +T + A+ IL +D L T++F D G +L+
Sbjct: 194 IFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLW 253
Query: 658 QHLF*FFGHPEVYILILPGFGIIS 729
HLF FFGHPEVYI+ P G+++
Sbjct: 254 AHLFWFFGHPEVYIVFFPALGVMA 277
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 673 FFGHPEVYILILPGFGIISHI 735
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 176
KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR 254
N L+PL+LGA D+AF R
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMAFAR 102
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 43.6 bits (98), Expect = 0.005
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 660 TFILIFWTS*SLYFNFTRIWYNFSYY 737
+ ++IFW+S SLYFN IWYNF YY
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYY 27
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 38.7 bits (86), Expect = 0.15
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Frame = +3
Query: 3 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 176
KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 12 KDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLV 71
Query: 177 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N L+PL++GA D++F R F PP L
Sbjct: 72 MPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPAL 110
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 37.1 bits (82), Expect = 0.45
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 688 EVYILILPGFGIISHII 738
EVYILILPGFG+ISHII
Sbjct: 155 EVYILILPGFGMISHII 171
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 36.7 bits (81), Expect = 0.59
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +1
Query: 616 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 738
S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 34.7 bits (76), Expect = 2.4
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = +1
Query: 253 DK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 417
+K +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 81 NKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 33.9 bits (74), Expect = 4.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 637 GGDPILYQHLF*FFGHPEVYILILPGF 717
G DP+L + LF F GHP VY +LP +
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAY 250
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 33.5 bits (73), Expect = 5.5
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 643 DPILYQHLF*FFGHPEVYILILPGF 717
+P+L + LF FFGHP VY +LP +
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAY 233
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 33.1 bits (72), Expect = 7.3
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +3
Query: 531 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 710
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 711 RI 716
I
Sbjct: 154 SI 155
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 32.7 bits (71), Expect = 9.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 8 YWNIIFYFWYLIRNNWNIFKTFNS 79
YWNI+F+FWYLI ++ K NS
Sbjct: 348 YWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -3
Query: 656 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 519
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,634,687
Number of Sequences: 1657284
Number of extensions: 9916247
Number of successful extensions: 21563
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 20538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21498
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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