Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0070
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    24   1.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.2  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   3.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.8  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.0  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = -1

Query: 737 ELTECPSKQKYLAVLL--FVTLTCMLNFFHKILLVLWFCVQMILNL*DRY--*YCHY*RL 570
           ELT C +K K+L  L    V +    N  + + L+LW  V  IL + D Y   Y  +  L
Sbjct: 223 ELTFC-NKIKHLVNLHKNLVKVAKDHNSLYSLHLLLWITVTFILLVGDSYIVMYVFFFHL 281

Query: 569 SKGRQISVV 543
           S  R + VV
Sbjct: 282 SDVRYVMVV 290


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 454 NGILSPFSINVTFVSIFA 401
           NG+L  F  N+TF ++FA
Sbjct: 447 NGVLFVFLTNMTFQNVFA 464


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 454 NGILSPFSINVTFVSIFA 401
           NG+L  F  N+TF ++FA
Sbjct: 447 NGVLFVFLTNMTFQNVFA 464


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 731 TECPSKQKYLAVLLFVTLTCMLNFFHK 651
           T CP K     V+ F+TL   ++ F++
Sbjct: 27  TTCPEKIYAYGVVAFITLGVAVSVFYR 53


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 731 TECPSKQKYLAVLLFVTLTCMLNFFHK 651
           T CP K     V+ F+TL   ++ F++
Sbjct: 27  TTCPEKIYAYGVVAFITLGVAVSVFYR 53


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -2

Query: 472 LTSLPSNGILSPFSINVTFVSIFAAGPSNGLGG 374
           +T+L S   L+  + NV    + ++GP + +GG
Sbjct: 61  VTTLASGSSLNGLTNNVPSNGLSSSGPFSSIGG 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,533
Number of Sequences: 336
Number of extensions: 4067
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)