Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0070
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0173 - 23294511-23294601,23294719-23294849,23295160-232954...    30   1.9  
04_04_0384 - 24853689-24853727,24853802-24853861,24854311-248543...    29   5.7  
12_01_0210 - 1593732-1593823,1594730-1594773,1594895-1594983,159...    28   10.0 
10_06_0018 - 9674771-9674995,9675079-9675126,9675471-9675530,967...    28   10.0 

>04_04_0173 -
           23294511-23294601,23294719-23294849,23295160-23295483,
           23296016-23296147,23296225-23296373,23296536-23296670,
           23296997-23297090,23297199-23297318,23298096-23298182,
           23298273-23298386,23299089-23299270,23299960-23300023,
           23300191-23300337,23300636-23300845,23301048-23301217,
           23301355-23301477,23301589-23301661,23301765-23301857
          Length = 812

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 524 LHNRTTKQLKSADPLIIFSNDNISNGPKDSKSF 622
           L N+ T + K   PLI F  D +SN P DSK +
Sbjct: 358 LRNKDTME-KHLSPLITFIPDLVSNAPDDSKGY 389


>04_04_0384 -
           24853689-24853727,24853802-24853861,24854311-24854357,
           24854487-24854565,24855184-24855279,24855645-24855714,
           24855787-24855857,24856010-24856105,24856501-24856628,
           24856733-24856853
          Length = 268

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = -3

Query: 267 YSIRQENFRTCSF*NFCIILYHPQMLAVILPMKMITLRICRYPSHNFLPRIIYLQYINNI 88
           YS+++EN    +     + + H   + ++    M+ + IC  P H FL   I  +Y + +
Sbjct: 107 YSVKKENITIMTT---IVTVMHAYKIVLLPLFPMLRVNICFMPIHLFLSYFIVQKYCSEV 163

Query: 87  I 85
           +
Sbjct: 164 V 164


>12_01_0210 -
           1593732-1593823,1594730-1594773,1594895-1594983,
           1595076-1595120,1595457-1595564,1595647-1595732,
           1595872-1595959,1596159-1596335,1596531-1596606,
           1596709-1596758,1596834-1596896,1597152-1597254,
           1597337-1597439,1597559-1597619,1598119-1598159,
           1599790-1599961
          Length = 465

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
 Frame = -2

Query: 655 IRYYLCCGFVSK*F*IFRTVTNIVITKDYQRVGRFQL--FSCSVM*IWMLIVFLVSKFWL 482
           I YY   GF+   + + R+   I       R+GR  +  FS   + I+  +  L +K+W+
Sbjct: 84  IGYY--AGFLGASYMVGRSFAAIFWGVVADRIGRKPVIVFSILSVVIFNTLFGLSTKYWM 141

Query: 481 S----FKLTSLPSNGILSPFSINVTFVSIFAAGPSNG 383
           +    F L +L  NG+L+P  +N  +      GP+ G
Sbjct: 142 ALTTRFVLGAL--NGLLAPIKVNTAWGLGLVVGPALG 176


>10_06_0018 -
           9674771-9674995,9675079-9675126,9675471-9675530,
           9675693-9675758,9675844-9675906,9675985-9676032,
           9676150-9676215,9676493-9676558,9676660-9676725,
           9676822-9676887,9676975-9677058,9677310-9677654,
           9677738-9677833,9678129-9678332,9678434-9678726,
           9678833-9678958,9679217-9679226
          Length = 643

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 411 DTNVTFMLN-GESMPLDGSDVNLKDNQNLDTKNTINIQI 524
           DT+  F +N GES      DV++ D  N DT   IN+++
Sbjct: 8   DTDDDFDINDGESNEDTNDDVDIDDESNEDTDVDINVRV 46


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,096,179
Number of Sequences: 37544
Number of extensions: 364548
Number of successful extensions: 761
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)