Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0070
         (803 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82245-1|CAA57709.1| 1246|Homo sapiens nidogen protein.                32   2.1  
M30269-1|AAA59932.1| 1247|Homo sapiens nidogen protein.                32   2.1  
BC045606-1|AAH45606.1| 1114|Homo sapiens NID1 protein protein.         32   2.1  
AL139161-2|CAI23422.1| 1247|Homo sapiens nidogen 1 protein.            32   2.1  
AL139161-1|CAI23421.1| 1114|Homo sapiens nidogen 1 protein.            32   2.1  
AL122018-2|CAI22681.1| 1247|Homo sapiens nidogen 1 protein.            32   2.1  
AL122018-1|CAI22680.1| 1114|Homo sapiens nidogen 1 protein.            32   2.1  
AB209448-1|BAD92685.1| 1241|Homo sapiens nidogen (enactin) varia...    32   2.1  
D50550-1|BAA19516.1| 1032|Homo sapiens LLGL protein.                   31   4.9  
AF118266-1|AAD21056.1|  372|Homo sapiens orphan G protein-couple...    31   6.4  

>X82245-1|CAA57709.1| 1246|Homo sapiens nidogen protein.
          Length = 1246

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 10/21 (47%), Positives = 18/21 (85%)
 Frame = +2

Query: 389 RRSCCENRYKCNIYAEWREYA 451
           R++C  NR++C+++AE R+YA
Sbjct: 386 RQTCANNRHQCSVHAECRDYA 406


>M30269-1|AAA59932.1| 1247|Homo sapiens nidogen protein.
          Length = 1247

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 10/21 (47%), Positives = 18/21 (85%)
 Frame = +2

Query: 389 RRSCCENRYKCNIYAEWREYA 451
           R++C  NR++C+++AE R+YA
Sbjct: 387 RQTCANNRHQCSVHAECRDYA 407


>BC045606-1|AAH45606.1| 1114|Homo sapiens NID1 protein protein.
          Length = 1114

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 10/21 (47%), Positives = 18/21 (85%)
 Frame = +2

Query: 389 RRSCCENRYKCNIYAEWREYA 451
           R++C  NR++C+++AE R+YA
Sbjct: 387 RQTCANNRHQCSVHAECRDYA 407


>AL139161-2|CAI23422.1| 1247|Homo sapiens nidogen 1 protein.
          Length = 1247

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 10/21 (47%), Positives = 18/21 (85%)
 Frame = +2

Query: 389 RRSCCENRYKCNIYAEWREYA 451
           R++C  NR++C+++AE R+YA
Sbjct: 387 RQTCANNRHQCSVHAECRDYA 407


>AL139161-1|CAI23421.1| 1114|Homo sapiens nidogen 1 protein.
          Length = 1114

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 10/21 (47%), Positives = 18/21 (85%)
 Frame = +2

Query: 389 RRSCCENRYKCNIYAEWREYA 451
           R++C  NR++C+++AE R+YA
Sbjct: 387 RQTCANNRHQCSVHAECRDYA 407


>AL122018-2|CAI22681.1| 1247|Homo sapiens nidogen 1 protein.
          Length = 1247

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 10/21 (47%), Positives = 18/21 (85%)
 Frame = +2

Query: 389 RRSCCENRYKCNIYAEWREYA 451
           R++C  NR++C+++AE R+YA
Sbjct: 387 RQTCANNRHQCSVHAECRDYA 407


>AL122018-1|CAI22680.1| 1114|Homo sapiens nidogen 1 protein.
          Length = 1114

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 10/21 (47%), Positives = 18/21 (85%)
 Frame = +2

Query: 389 RRSCCENRYKCNIYAEWREYA 451
           R++C  NR++C+++AE R+YA
Sbjct: 387 RQTCANNRHQCSVHAECRDYA 407


>AB209448-1|BAD92685.1| 1241|Homo sapiens nidogen (enactin) variant
           protein.
          Length = 1241

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 10/21 (47%), Positives = 18/21 (85%)
 Frame = +2

Query: 389 RRSCCENRYKCNIYAEWREYA 451
           R++C  NR++C+++AE R+YA
Sbjct: 386 RQTCANNRHQCSVHAECRDYA 406


>D50550-1|BAA19516.1| 1032|Homo sapiens LLGL protein.
          Length = 1032

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = -2

Query: 484 LSFKLTSLPS-NGILSPFSIN-VTFVSIFAAGPSNGLGGRGS 365
           LSF+L S P  +G  +P S+  VT V + AAG   GLG  GS
Sbjct: 117 LSFQLPSRPGFDGASAPLSLTRVTVVLLVAAGDIAGLGTEGS 158


>AF118266-1|AAD21056.1|  372|Homo sapiens orphan G protein-coupled
           receptor GPR45 protein.
          Length = 372

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 791 VIVLFL*FSSCVVPYDCEELTECPSKQKYLAVLLFVTLTCMLNF 660
           +++LF+ FS C +P+    L    S++ Y     + T TC+L F
Sbjct: 269 ILILFVGFSLCWLPHSVYSLLSVFSQRFYCGSSFYATSTCVLWF 312


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,002,807
Number of Sequences: 237096
Number of extensions: 2050350
Number of successful extensions: 4314
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4314
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)