Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0070
         (803 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M59501-1|AAA28994.1|  462|Drosophila melanogaster tube protein p...    44   2e-04
AY061215-1|AAL28763.1|  462|Drosophila melanogaster LD16174p pro...    44   2e-04
AE014297-74|AAF52136.3|  462|Drosophila melanogaster CG10520-PA ...    44   2e-04

>M59501-1|AAA28994.1|  462|Drosophila melanogaster tube protein
           protein.
          Length = 462

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 20/36 (55%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
 Frame = +3

Query: 252 LDEWSTSGRI--RPTVATLLDVLVKAEIYRAADEIA 353
           +DEW TSG++  RPTV  LL +LV+AE++ AAD +A
Sbjct: 114 IDEWKTSGKLNERPTVGVLLQLLVQAELFSAADFVA 149



 Score = 39.1 bits (87), Expect = 0.007
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +1

Query: 37  KMERNTELRKLPMGSLYNIINILEINDSWQKVMAWIP 147
           K  RNTELR++    +Y +  IL+ N  W+K+M+ IP
Sbjct: 26  KYSRNTELRRVEDNDIYRLAKILDENSCWRKLMSIIP 62


>AY061215-1|AAL28763.1|  462|Drosophila melanogaster LD16174p
           protein.
          Length = 462

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 20/36 (55%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
 Frame = +3

Query: 252 LDEWSTSGRI--RPTVATLLDVLVKAEIYRAADEIA 353
           +DEW TSG++  RPTV  LL +LV+AE++ AAD +A
Sbjct: 114 IDEWKTSGKLNERPTVGVLLQLLVQAELFSAADFVA 149



 Score = 39.1 bits (87), Expect = 0.007
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +1

Query: 37  KMERNTELRKLPMGSLYNIINILEINDSWQKVMAWIP 147
           K  RNTELR++    +Y +  IL+ N  W+K+M+ IP
Sbjct: 26  KYSRNTELRRVEDNDIYRLAKILDENSCWRKLMSIIP 62


>AE014297-74|AAF52136.3|  462|Drosophila melanogaster CG10520-PA
           protein.
          Length = 462

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 20/36 (55%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
 Frame = +3

Query: 252 LDEWSTSGRI--RPTVATLLDVLVKAEIYRAADEIA 353
           +DEW TSG++  RPTV  LL +LV+AE++ AAD +A
Sbjct: 114 IDEWKTSGKLNERPTVGVLLQLLVQAELFSAADFVA 149



 Score = 39.1 bits (87), Expect = 0.007
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +1

Query: 37  KMERNTELRKLPMGSLYNIINILEINDSWQKVMAWIP 147
           K  RNTELR++    +Y +  IL+ N  W+K+M+ IP
Sbjct: 26  KYSRNTELRRVEDNDIYRLAKILDENSCWRKLMSIIP 62


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,490,863
Number of Sequences: 53049
Number of extensions: 680281
Number of successful extensions: 1638
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)