Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0070
         (803 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29244-3|AAC71088.1|  363|Caenorhabditis elegans Hypothetical pr...    30   2.2  
U10402-12|AAA19071.1|  122|Caenorhabditis elegans Hypothetical p...    30   2.2  
Z74030-14|CAA98442.1|  198|Caenorhabditis elegans Hypothetical p...    29   2.9  
U23513-5|AAP68948.1|  214|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U23513-4|AAP68947.1|  322|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z82282-4|CAB05276.1|  485|Caenorhabditis elegans Hypothetical pr...    28   9.0  
Z82282-2|CAB05274.2|  544|Caenorhabditis elegans Hypothetical pr...    28   9.0  

>U29244-3|AAC71088.1|  363|Caenorhabditis elegans Hypothetical
           protein ZK1248.7 protein.
          Length = 363

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +1

Query: 88  NIINILEINDSWQKVMAWIPTNPQSDHFHRKYNS--EHLRMIQDDAKISK 231
           NII++LE   + +   A++ T+    H H+KY +  +   M+  D KISK
Sbjct: 26  NIISLLENAAASKCKFAFVITDDSITHLHKKYKALEQKSMMVIQDMKISK 75


>U10402-12|AAA19071.1|  122|Caenorhabditis elegans Hypothetical
           protein C34E10.9 protein.
          Length = 122

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 602 PKDSKSFGHKTTAQVISYERNSAYRSTLRTEELPNISALMG 724
           P  +   GH  +A+ + Y R    R T+R  +LPN + ++G
Sbjct: 26  PTRNTQGGHGFSAEFLEYRRRRQERHTVRLAKLPNETLIIG 66


>Z74030-14|CAA98442.1|  198|Caenorhabditis elegans Hypothetical
           protein D1054.3 protein.
          Length = 198

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 411 DTNVTFMLNGESMPLDGSDVNLKDNQNLDTKNTINIQIY 527
           +T+VT  +    +PLD   V+L DN  L  K    I  Y
Sbjct: 13  ETDVTLTILKRGVPLDDCSVSLSDNNTLTVKQCDEILFY 51


>U23513-5|AAP68948.1|  214|Caenorhabditis elegans Hypothetical
           protein D2021.2b protein.
          Length = 214

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -1

Query: 713 QKYLAVLLFVTLTCMLNFFHKILLVLWFCVQM 618
           +++L    F+ +T +L+  H ++L + FCVQM
Sbjct: 125 EEFLETDAFLMITIILSAMHALMLAVLFCVQM 156


>U23513-4|AAP68947.1|  322|Caenorhabditis elegans Hypothetical
           protein D2021.2a protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -1

Query: 713 QKYLAVLLFVTLTCMLNFFHKILLVLWFCVQM 618
           +++L    F+ +T +L+  H ++L + FCVQM
Sbjct: 233 EEFLETDAFLMITIILSAMHALMLAVLFCVQM 264


>Z82282-4|CAB05276.1|  485|Caenorhabditis elegans Hypothetical
           protein T07G12.4 protein.
          Length = 485

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = +2

Query: 521 DLHNRTTKQLKSADPLIIFSNDNISNGP-KDSKSFGHKTTAQVISYERNSAYRSTLRTEE 697
           D+     K       LI F  D I++G  +  + F  K     IS E+N    S+   + 
Sbjct: 389 DIFGTLLKMRMLVGGLIAFCLDIIASGATRKQRGFEDKLEKIEISVEKNGFALSSFANQT 448

Query: 698 LPNISALMGTQLIPHSRTVR 757
           +  I +L    ++P  +++R
Sbjct: 449 ILKIPSLTKLPIVPSEKSIR 468


>Z82282-2|CAB05274.2|  544|Caenorhabditis elegans Hypothetical
           protein T07G12.2 protein.
          Length = 544

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = +2

Query: 521 DLHNRTTKQLKSADPLIIFSNDNISNGP-KDSKSFGHKTTAQVISYERNSAYRSTLRTEE 697
           D+     K       LI F  D I++G  +  + F  K     IS E+N    S+   + 
Sbjct: 451 DIFGTLLKMRMLVGGLIAFCLDIIASGATRKQRGFEDKLEKIEISVEKNGFALSSFANQT 510

Query: 698 LPNISALMGTQLIPHSRTVR 757
           +  I +L    ++P  +++R
Sbjct: 511 ILKIPSLTKLPIVPSEKSIR 530


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,818,213
Number of Sequences: 27780
Number of extensions: 375065
Number of successful extensions: 1006
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)