Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0069
(737 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0126 + 12835431-12838183,12838471-12838566,12838920-128389... 38 0.011
07_02_0019 + 11877119-11879984,11880316-11880389,11881293-118815... 35 0.078
12_02_1109 + 26151421-26153601 33 0.18
04_03_0521 + 16765347-16767324,16769202-16769392 31 0.95
03_02_0050 + 5272471-5274861 31 0.95
12_02_1265 - 27435096-27437675 31 1.3
06_03_1207 + 28418473-28421073 31 1.3
06_03_0493 + 21402536-21404599 31 1.3
04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787 30 2.2
04_04_0243 - 23858975-23860706,23861178-23861230,23861338-238615... 30 2.2
06_03_1237 + 28602250-28604196 29 2.9
05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 29 2.9
10_08_0419 - 17783202-17784938 29 5.1
08_01_0218 + 1743566-1745537,1746834-1747696,1748329-1748991 29 5.1
07_03_1745 - 29176951-29178901,29178960-29179069,29179536-29179547 29 5.1
06_01_0376 + 2709254-2711267,2711311-2711450 29 5.1
04_04_0175 - 23307507-23308688,23308962-23309647,23310662-23310680 29 5.1
12_02_0778 + 23074463-23076411,23076859-23077072,23077824-230778... 28 8.9
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 28 8.9
09_01_0051 - 862286-864670 28 8.9
04_04_0258 + 23988409-23989580,23990450-23990851,23991138-23991204 28 8.9
04_03_0517 + 16712487-16712570,16713715-16714059,16714149-167143... 28 8.9
04_03_0515 + 16698589-16701066 28 8.9
03_02_0163 - 6056959-6058989 28 8.9
01_05_0048 - 17561963-17563585 28 8.9
>08_02_0126 +
12835431-12838183,12838471-12838566,12838920-12838971,
12839198-12839298,12839349-12839370
Length = 1007
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 512 PTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQL 691
P + I+ L K+G+ + A+++ K IE G +P L++ L +EG VE+ + L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657
>07_02_0019 +
11877119-11879984,11880316-11880389,11881293-11881511,
11881557-11881679,11881759-11881859,11881938-11881990,
11882084-11882269,11882677-11882894
Length = 1279
Score = 34.7 bits (76), Expect = 0.078
Identities = 21/101 (20%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +2
Query: 440 KNRKSSVQKGRHNPKNCHT*STSKPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMP 619
K+R+S+ K + +C + KP + I+ +++GN +A ++ + + G P
Sbjct: 326 KSRRSNEAKALLDEMSC---AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQP 382
Query: 620 KSNVVKYLLKNLAEEGNVEKIQQLGKNISENTKR--KVTYD 736
L++ L + G +++ L K + ++ R +TY+
Sbjct: 383 NKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 423
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/64 (21%), Positives = 32/64 (50%)
Frame = +2
Query: 512 PTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQL 691
P + S I +K+G+L A ++ + ++ G P + LL++ + ++EK+
Sbjct: 557 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 616
Query: 692 GKNI 703
K++
Sbjct: 617 FKSM 620
>12_02_1109 + 26151421-26153601
Length = 726
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/79 (22%), Positives = 36/79 (45%)
Frame = +2
Query: 500 STSKPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEK 679
S P + ++AL K G L +A ++ K + G +P + ++ E+GN+E
Sbjct: 542 SNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLED 601
Query: 680 IQQLGKNISENTKRKVTYD 736
+ L + + + K Y+
Sbjct: 602 LLNLLEKMLARQEMKSAYN 620
>04_03_0521 + 16765347-16767324,16769202-16769392
Length = 722
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +2
Query: 539 IEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQL 691
I VKDG + +A + L+ +E G +PK + ++K L + ++K + +
Sbjct: 55 IYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 105
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 530 STNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEK 679
S+ I L K+G +A+ D++ ++ G P L++ GN+E+
Sbjct: 370 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 419
>03_02_0050 + 5272471-5274861
Length = 796
Score = 31.1 bits (67), Expect = 0.95
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +2
Query: 509 KPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEK 679
KPT + +++L K+G L +A+ L K E G P L+ + GNV K
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAK 437
Score = 31.1 bits (67), Expect = 0.95
Identities = 16/68 (23%), Positives = 34/68 (50%)
Frame = +2
Query: 512 PTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQL 691
P+ + +T I+ L + L +A+D L + +E G +P ++ +EG++E +
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRF 581
Query: 692 GKNISENT 715
+ EN+
Sbjct: 582 HNKMVENS 589
>12_02_1265 - 27435096-27437675
Length = 859
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 509 KPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQ 688
+P + T I+ K G L AMD+ + EVG P + ++ L + G++ +
Sbjct: 433 EPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYK 492
Query: 689 LGKNISEN--TKRKVTYD 736
L + EN T VTY+
Sbjct: 493 LFCEMVENGCTPNLVTYN 510
>06_03_1207 + 28418473-28421073
Length = 866
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Frame = +2
Query: 416 RCTVYNSGKNRKSSVQKGRHN-PKNCHT*STS---KPTKAEISTNIEALVKDGNLAQAMD 583
+CT++ +++G+H+ K + TS KP+ + I + K+G L A D
Sbjct: 541 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 600
Query: 584 VLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEK 679
++LK G P L+ G +++
Sbjct: 601 LILKMEREGVAPDVVTYNILIDGCGHMGYIDR 632
>06_03_0493 + 21402536-21404599
Length = 687
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +2
Query: 539 IEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQL 691
I+ L K+G LA+A + + E+G +P L+ + G +++++QL
Sbjct: 195 IDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
>04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787
Length = 345
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 154 ARHRRLDDACQRYVEEGKSEYLEGLLE 234
AR+R ++ RYV+EGK Y+E + E
Sbjct: 291 ARYREYEEKAARYVKEGKIAYVEDVAE 317
>04_04_0243 -
23858975-23860706,23861178-23861230,23861338-23861538,
23861649-23861990,23862277-23862423,23862945-23863086,
23863876-23863959,23864772-23864779
Length = 902
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 515 TKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQLG 694
T A + + AL DG +A +++ + G P L+ +EGNV+K ++
Sbjct: 625 TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 684
Query: 695 KNISENTKRK--VTY 733
+N+S R VTY
Sbjct: 685 ENMSRRGVRATVVTY 699
>06_03_1237 + 28602250-28604196
Length = 648
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 624 DLGMVPTSIDLSKTSIACAKFPSLTRASMFVEISAFVGF 508
+LGMV + L+ ACA+ +L RA+ EI+ GF
Sbjct: 267 ELGMVIDEVSLTGAISACAQLGALRRAAWVQEIAERTGF 305
>05_03_0415 -
13661745-13664240,13664376-13664401,13665018-13665035,
13665914-13666181,13666531-13666598,13667102-13667243
Length = 1005
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 280 W*KMFERSIEKVLSLPQVILPSTLISLPQRIADKRHPSVCVEPAI 146
W +F + +L+LP+ I+ S L+SLP + P++ EP I
Sbjct: 157 WRTVFVNTKAMLLNLPKAIIASGLLSLPTPLLSVSLPALPSEPFI 201
>10_08_0419 - 17783202-17784938
Length = 578
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 539 IEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQLGKNISENTK 718
I AL G + +A+ +L + EVG P +++ ++GN++ ++ + + K
Sbjct: 446 IGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505
Query: 719 RK--VTYD 736
R VTY+
Sbjct: 506 RANVVTYN 513
>08_01_0218 + 1743566-1745537,1746834-1747696,1748329-1748991
Length = 1165
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 378 LVYLGNHLKSKNRDVPFIIPEKIEKVQSKKEDIIQKIV 491
L+YLG++L + P+ +K+ +V+ K +D QKI+
Sbjct: 857 LIYLGDYLPAWRWLDPYGCEKKMREVEKKVDDFHQKII 894
>07_03_1745 - 29176951-29178901,29178960-29179069,29179536-29179547
Length = 690
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/67 (22%), Positives = 29/67 (43%)
Frame = +2
Query: 512 PTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQL 691
P +T I L K +A+D+ + G P + +Y++ L +EG ++
Sbjct: 603 PDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEI 662
Query: 692 GKNISEN 712
+ + EN
Sbjct: 663 WEYMMEN 669
>06_01_0376 + 2709254-2711267,2711311-2711450
Length = 717
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +2
Query: 512 PTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQL 691
P S+ I L ++ L A ++ +++G P L+ +EGNVEK L
Sbjct: 431 PDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSL 490
>04_04_0175 - 23307507-23308688,23308962-23309647,23310662-23310680
Length = 628
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = +2
Query: 518 KAEISTNIEALVKDGN-LAQAMDVLLKSIE----VGTMPKSNVVKYLLKNLAEEGNVEKI 682
K++I EA V DG+ + Q L +E V + NV K K L N E
Sbjct: 151 KSQIVVLPEACVTDGDTVEQNHPCKLHDLEGNSSVDGLTVVNVEKSTPKQLVSNDNAEYC 210
Query: 683 QQLGKNISENTK 718
QQ+G ++SE+++
Sbjct: 211 QQMGADVSESSE 222
>12_02_0778 +
23074463-23076411,23076859-23077072,23077824-23077887,
23077930-23078008,23078181-23078303,23078805-23078919
Length = 847
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 530 STNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKY 640
+T I+A+ K GN+ AM VLL G P NVV Y
Sbjct: 353 NTFIDAICKCGNMELAMQVLLDMEAKGVKP--NVVTY 387
>10_08_0495 - 18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 539 IEALVKDGNLAQAMDVLLKSI-EVGTMPKSNVVKYLLKNLAEEGNVEKIQQL 691
++ L D + AMD++L+ + E+G +P LLK L +E ++ +L
Sbjct: 1011 LKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALEL 1062
>09_01_0051 - 862286-864670
Length = 794
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +2
Query: 506 SKPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEG 667
S+PT +T ++ALV G + A+ + + + G P L+ L ++G
Sbjct: 168 SRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQG 221
>04_04_0258 + 23988409-23989580,23990450-23990851,23991138-23991204
Length = 546
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 405 SKNRDVPFIIPEKIEKVQSKKEDIIQKIVTPKVPQNQQRPKSPQTSRP 548
++NR PF E+V ++K +K+ T ++ Q RP S Q+SRP
Sbjct: 281 ARNRPSPFGAARPREEVLAEKGLDWRKMET-EIEQKTSRPTSSQSSRP 327
>04_03_0517 +
16712487-16712570,16713715-16714059,16714149-16714301,
16714889-16714972,16715426-16715479,16715552-16715647,
16716163-16716258,16716941-16717086,16717650-16717799,
16717889-16718018,16718128-16718787,16718881-16718979,
16719058-16719210,16719323-16720054,16720338-16720640
Length = 1094
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = +1
Query: 100 ECGRLRQARRILETPGLQARHRRLDDACQRYVEEGKSEYLEGLLEATKELSQLIAQTSST 279
+ ++Q R+++ Q +H R +A EGK LE L++ T + I + +
Sbjct: 689 QAAEIQQLNRLVQ----QYKHERECNAVIAQTREGKIARLESLMDGTLPTEEFINEEYLS 744
Query: 280 IYSLHTVMPMK 312
+ + H ++ K
Sbjct: 745 LMNEHKILQQK 755
>04_03_0515 + 16698589-16701066
Length = 825
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 539 IEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKY--LLKNLAEEGNVEKIQQL 691
I+ K+G + +A D+ K E G MP NVV Y L+ L + ++K +++
Sbjct: 231 IDGFSKEGEVDKAHDLFYKMEEQGIMP--NVVTYSSLINGLCKTKEMDKAERV 281
>03_02_0163 - 6056959-6058989
Length = 676
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +2
Query: 500 STSKPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEK 679
S SKP S+ + GN+A A +L + +E G P ++ L++ + G +
Sbjct: 391 SRSKPDSWSYSSMVTLYSCTGNVAGAEGILNEMVEAGFKPNIFILTSLIRCYGKAGRTDD 450
Query: 680 I 682
+
Sbjct: 451 V 451
>01_05_0048 - 17561963-17563585
Length = 540
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +3
Query: 267 NIFYHLLVTYCNADETDKALGLWTLLQEESEVPSNQFLVYLGNHLKSKNR 416
N + ++ +C+ + D AL +W ++E+ +P L N L +NR
Sbjct: 435 NTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFENR 484
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,905,763
Number of Sequences: 37544
Number of extensions: 392830
Number of successful extensions: 1348
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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