Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0068
         (849 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    25   1.00 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    25   1.00 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    25   1.00 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.1  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   7.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.3  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 524 TGSAGCQESTDPFNYPAAAWSA 589
           TG+AG Q   D  NYPA  + +
Sbjct: 124 TGTAGSQADRDGKNYPAVPYGS 145


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 524 TGSAGCQESTDPFNYPAAAWSA 589
           TG+AG Q   D  NYPA  + +
Sbjct: 125 TGTAGSQADRDGKNYPAVPYGS 146


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 524 TGSAGCQESTDPFNYPAAAWSA 589
           TG+AG Q   D  NYPA  + +
Sbjct: 125 TGTAGSQADRDGKNYPAVPYGS 146


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 216 IVLVDDQLEPILREVVHLGRYGHEVHG 136
           IVLVD+  +P L    HL  Y   V G
Sbjct: 582 IVLVDEVQQPNLSHPFHLHGYAFNVIG 608


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 749 SRNAIKDCRLRACV 708
           +R A K CRLR C+
Sbjct: 54  NRTACKACRLRKCL 67


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 267 RPWIILFGHRP 299
           RPW  ++ HRP
Sbjct: 526 RPWQTVYNHRP 536


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,922
Number of Sequences: 336
Number of extensions: 4065
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)