Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0068
         (849 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745206-1|AAU93473.1|   91|Anopheles gambiae cytochrome P450 pr...    27   0.54 
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    24   5.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   6.7  

>AY745206-1|AAU93473.1|   91|Anopheles gambiae cytochrome P450
           protein.
          Length = 91

 Score = 27.5 bits (58), Expect = 0.54
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +1

Query: 94  PGPDSNLYYSFDLGPVHFVSVSTEVYYFTEYGLKLIVNQYDW 219
           P  D + YY F LGP + + +   +   ++ GL L+++++D+
Sbjct: 39  PNYDPDAYYPFGLGPRNCIGLRQGI-MLSKIGLVLMLSRFDF 79


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 515 HIVTGSAGCQESTDPFNYPAAAWSAFRSTDYGYT 616
           ++   +AG   ST P   P+A+ S  RSTD   T
Sbjct: 155 NVAAAAAGASASTPP-TIPSASPSPTRSTDLSQT 187


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -3

Query: 421 AHMTTSTPNSISNGSRPNIPAIPTRVSSTLQSMSLELLQYMGRWPNSIIQG 269
           A +T+   + IS+ S PN+ +  + +SS   S    LL +    P + +QG
Sbjct: 193 AAVTSPVLSRISSASSPNLSSNGSTLSSPSGSRMEYLLPHQQHPPGAGVQG 243


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 850,135
Number of Sequences: 2352
Number of extensions: 16864
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)