Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0067
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    27   0.64 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.4  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   4.5  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   4.5  

>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 27.1 bits (57), Expect = 0.64
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -3

Query: 626 CLIRRTFSLASYNVLLYGTMGPLSPLYQ 543
           C I + F L  YN LLY     LSP YQ
Sbjct: 9   CAIAKVFELVIYNNLLYACRSYLSP-YQ 35


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 424 RSGEDAGRHRGRTKRSNNGGDG 489
           R G   GR RGR +   +GG G
Sbjct: 72  RGGRGGGRGRGRGRGGRDGGGG 93


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 46  GLREWTRLTTH*NNNSLSHSF 108
           GLRE  RLT H NN  +  +F
Sbjct: 399 GLRERPRLTKHLNNEHVFEAF 419


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 46  GLREWTRLTTH*NNNSLSHSF 108
           GLRE  RLT H NN  +  +F
Sbjct: 399 GLRERPRLTKHLNNEHVFEAF 419


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 837,342
Number of Sequences: 2352
Number of extensions: 19163
Number of successful extensions: 52
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)