Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0067
(769 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 34 0.001
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 30 0.027
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 30 0.027
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.77
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 2.4
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 4.1
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 23 4.1
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 4.1
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 7.2
DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 21 9.5
AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 21 9.5
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 9.5
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 21 9.5
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 490 QTARLARLVYGYPTPEIFWYRGLNGPMVPYSSTLYEARENVLLIRQLIDEALGEYACQAY 669
+ +L L G P PE+ W + G ++ S L + E L I+++ GEY+C
Sbjct: 1292 EDVKLPCLAVGVPAPEVTW--KVRGAVLQSSDRLRQLPEGSLFIKEVDRTDAGEYSCYVE 1349
Query: 670 NGEG 681
N G
Sbjct: 1350 NTFG 1353
Score = 29.1 bits (62), Expect = 0.048
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 487 GQTARLARLVYGYPTPEIFWYRGLNGPMVPYSSTLYEARENVL-LIRQLIDEALGEYACQ 663
G+T R+ V GYP I W R + ++ ++ + ++ D+A Y C
Sbjct: 505 GETLRVTCPVAGYPIESIVWERDTRVLPINRKQKVFPNGTLIIENVERMSDQA--TYTCV 562
Query: 664 AYNGEGSPATLLMEVR 711
A N +G A +EV+
Sbjct: 563 ARNAQGYSARGTLEVQ 578
Score = 29.1 bits (62), Expect = 0.048
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Frame = +1
Query: 487 GQTARLARLVYGYPTPEIFWYRGLNGPMVPY-----SSTLYEARENVLLIRQLIDEALGE 651
G AR+ G+P P++ W + Y S+ + L I + G
Sbjct: 693 GSDARVECKADGFPKPQVTWKKAAGDTPGDYTDLKLSNPDISVEDGTLSINNIQKTNEGY 752
Query: 652 YACQAYNGEGS--PATLLMEVRA 714
Y C+A NG G+ A + + V+A
Sbjct: 753 YLCEAVNGIGAGLSAVIFISVQA 775
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 601 RENVLLIRQLIDEALGEYACQAYNGEGS 684
R ++L+I + GEY C A N G+
Sbjct: 639 RVSMLMISVITARHAGEYVCTAENAAGT 666
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 29.9 bits (64), Expect = 0.027
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 493 TARLARLVYGYPTPEIFWYRGLNGPMVPYSST--LYEARENVLLIRQLIDEALGEYACQA 666
+A LA G PT E WY+G G + ST + L++ L + G+Y CQ
Sbjct: 1330 SATLACNAVGDPTRE--WYKG-QGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDYTCQV 1386
Query: 667 YNGEGS 684
N +G+
Sbjct: 1387 ENAQGN 1392
Score = 29.1 bits (62), Expect = 0.048
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 487 GQTARLARLVYGYPTPEIFWYRGLNGPMVPYSSTLYEARENVLLIRQLIDEA-LGEYACQ 663
G+T RL V GYP EI W R +P + L+I + + G Y C
Sbjct: 533 GETLRLKCPVAGYPIEEIKWERA--NRELPDDLRQKVLPDGTLVITSVQKKGDAGVYTCS 590
Query: 664 AYNGEGSPA 690
A N +G A
Sbjct: 591 ARNKQGHSA 599
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 29.9 bits (64), Expect = 0.027
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 493 TARLARLVYGYPTPEIFWYRGLNGPMVPYSST--LYEARENVLLIRQLIDEALGEYACQA 666
+A LA G PT E WY+G G + ST + L++ L + G+Y CQ
Sbjct: 1326 SATLACNAVGDPTRE--WYKG-QGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDYTCQV 1382
Query: 667 YNGEGS 684
N +G+
Sbjct: 1383 ENAQGN 1388
Score = 29.1 bits (62), Expect = 0.048
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 487 GQTARLARLVYGYPTPEIFWYRGLNGPMVPYSSTLYEARENVLLIRQLIDEA-LGEYACQ 663
G+T RL V GYP EI W R +P + L+I + + G Y C
Sbjct: 533 GETLRLKCPVAGYPIEEIKWERA--NRELPDDLRQKVLPDGTLVITSVQKKGDAGVYTCS 590
Query: 664 AYNGEGSPA 690
A N +G A
Sbjct: 591 ARNKQGHSA 599
Score = 22.2 bits (45), Expect = 5.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +1
Query: 562 GPMVPYSSTLYEARENVLLIRQLIDEALGEYACQAYN 672
GP T + ++L+I L + G Y+C A N
Sbjct: 653 GPSERVHVTNMDQYNSILMIEHLSPDHNGNYSCVARN 689
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.0 bits (52), Expect = 0.77
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 176 YAYDTSCNLNVVFFFI 223
Y YDT C LN+V + I
Sbjct: 501 YTYDTICQLNIVHYGI 516
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 23.4 bits (48), Expect = 2.4
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 9/31 (29%)
Frame = -2
Query: 414 PFVSFTRVCEY---FW------CHITIRQWS 349
PF ++T VCEY +W C I I WS
Sbjct: 151 PFTTYTPVCEYDHTWWPYDILNCTIHIASWS 181
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 283 LCPKRNPLFRIRINNINQQFV 345
LCP+ FR+ +N+I + +V
Sbjct: 265 LCPQEEACFRLLMNDILRPYV 285
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 283 LCPKRNPLFRIRINNINQQFV 345
LCP+ FR+ +N+I + +V
Sbjct: 180 LCPQEEACFRLLMNDILRPYV 200
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 283 LCPKRNPLFRIRINNINQQFV 345
LCP+ FR+ +N+I + +V
Sbjct: 499 LCPQEEACFRLLMNDILRPYV 519
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1
Query: 568 MVPYSSTLYEARENVLLIRQLIDEALGEYACQAYNGEG 681
M P+ ++ R LL+ ++ D+ L + A +G G
Sbjct: 332 MAPWVRKIFIRRLPKLLLMRVPDDLLNDLAAHKMHGRG 369
>DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2
protein.
Length = 117
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/45 (24%), Positives = 19/45 (42%)
Frame = -3
Query: 479 PLLLRFVLPRCRPASSPDLTMLRLLVSREFVNTFGVISPFVNGAS 345
PL+LR P+C P + + + + R + + I G S
Sbjct: 73 PLVLRGACPQCSPEETRQIKKVLSHIQRTYPKEWSKIVQQYAGVS 117
>AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein
protein.
Length = 117
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/45 (24%), Positives = 19/45 (42%)
Frame = -3
Query: 479 PLLLRFVLPRCRPASSPDLTMLRLLVSREFVNTFGVISPFVNGAS 345
PL+LR P+C P + + + + R + + I G S
Sbjct: 73 PLVLRGACPQCSPEETRQIKKVLSHIQRTYPKEWSKIVQQYAGVS 117
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/47 (19%), Positives = 19/47 (40%)
Frame = +1
Query: 346 DAPLTNGDMTPKVFTNSRETNKRSMVRSGEDAGRHRGRTKRSNNGGD 486
++ +T G+ N+ N + +G + + +NN GD
Sbjct: 225 NSTITAGNANTNASNNNNNNNNNNNNNNGANDNGNGNGASNNNNNGD 271
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 21.4 bits (43), Expect = 9.5
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Frame = +1
Query: 520 GYPTPEIFWYRGLNGPMVPYSSTLYEARE-----NVLLIRQLIDEA----LGEYACQAYN 672
G+P PEI W L + Y ++ E + L + ID A G Y CQA N
Sbjct: 48 GFPRPEITW---LKDGIELYHHKFFQVHEWPVGNDTLKSKMEIDPATQKDAGYYECQADN 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,463
Number of Sequences: 438
Number of extensions: 5450
Number of successful extensions: 24
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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