Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0066
         (557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   1.7  
AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    25   1.7  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    24   2.9  
AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        23   6.8  
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        23   6.8  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   6.8  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    23   9.0  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 4/104 (3%)
 Frame = +1

Query: 40   LEQAENIIKEHEAFLTTMEANDDKINSVVQFANRLVEERHFDADKIQRKAENIEARRNAN 219
            L+Q   ++ E E   TT+    +   +++    + +EE     D+++R  +  E    A 
Sbjct: 767  LQQLAGVVFEGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVRRTVQQEEQTAQAK 826

Query: 220  REKALNLME----KLQTSFSCTSSCRTATNLENGFRRRTLPHKT 339
            ++ A+  +E    ++Q S       R      +  +++ L   T
Sbjct: 827  KD-AMGAVEAEIARIQASIDKEQQARHDLQTNHKVKQQALKRST 869


>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 34  TNLEQAENIIKEHEAFLTTMEANDDKINSVVQFANRL 144
           TN  + E +  +HEA+ +  E    K+N + Q  + L
Sbjct: 85  TNTFKPETVPVQHEAYKSFTEVESSKVNELQQALSSL 121


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -1

Query: 173 LSASKCLSSTRRLANCTTELILSSLASIVVRKASCS 66
           +   +C++++ R   CTT+        + +R A+CS
Sbjct: 25  IQQEQCVTASNRAGYCTTKAECPDQEQLDLRAATCS 60


>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 150 GEALRRGQDSAQGGEHRGTPQCQ 218
           G  L   +DS  GG H  +  CQ
Sbjct: 18  GRVLYAQKDSEDGGSHYSSDDCQ 40


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 150 GEALRRGQDSAQGGEHRGTPQCQ 218
           G  L   +DS  GG H  +  CQ
Sbjct: 18  GRVLYAQKDSEDGGSHYSSDDCQ 40


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 172 KIQRKAENIEARRNANREKALNLMEKLQTSFSCTSS 279
           KIQR AE + ARR   RE+   + ++L+  +    S
Sbjct: 285 KIQR-AECVAARRKMQRERCPEVKQQLRIVYIAARS 319


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 242 WRSSRPASVAPVLAGLRRTWRMGSGEERYRTRRYLPLRQD 361
           WRS  PAS A  L G     ++ +    ++T  + P++ D
Sbjct: 83  WRSQNPASPAGSLGGKDVVSKIDAAMANFKT-LFEPMKAD 121


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,612
Number of Sequences: 2352
Number of extensions: 10569
Number of successful extensions: 51
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)