Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0065
         (759 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0483 + 19546295-19546397,19547163-19547482,19547606-195486...    32   0.57 
01_01_0284 - 2357085-2357244,2357354-2357730,2359114-2359371           30   1.7  
02_03_0056 - 14525491-14525833,14525882-14526125,14526447-145265...    29   3.0  
11_05_0078 - 18906900-18907082,18907104-18907337,18907429-189076...    29   5.3  
05_05_0353 - 24338717-24338946,24339046-24339134,24339421-243395...    29   5.3  
10_06_0102 + 10758601-10758948,10759051-10759257,10759349-107595...    28   9.3  
09_04_0011 + 13703564-13703766,13704685-13705526,13705628-137057...    28   9.3  

>12_02_0483 +
           19546295-19546397,19547163-19547482,19547606-19548611,
           19549890-19549985,19550500-19551551
          Length = 858

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 180 YPYVNMAVPATAFKDSVQKFMISKDRTAFKIWKIKEKSFNR 302
           YP   + +P    KD V KF  + D+ +  + KI+  S+N+
Sbjct: 220 YPITTIIIPTATPKDKVVKFFDTNDQMSNSLTKIQASSYNK 260


>01_01_0284 - 2357085-2357244,2357354-2357730,2359114-2359371
          Length = 264

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +3

Query: 159 KNDENAYYPYVNMAVPATAFKDSVQKFMISKDRTAFKIWKIKEKSFNRN 305
           +N + A++ Y+ M        + + ++MI+KD   + IW  + K F RN
Sbjct: 216 ENLQRAFHKYLEMRGITPMATNFLHEYMINKDSREYLIWLRRLKDFVRN 264


>02_03_0056 -
           14525491-14525833,14525882-14526125,14526447-14526591,
           14526757-14527121,14527323-14527722
          Length = 498

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +2

Query: 611 QNIPLLHPKYSLYTDLCSENGQDPCLLVRFSAIKVVC-VCGST-HFGNSYP 757
           + I LL  K  L      ++ + P   V+     V C VCG T HFGN YP
Sbjct: 51  KEIELLAAKLDLLMKRLDDHEKRPQETVKALDSHVTCEVCGGTGHFGNDYP 101


>11_05_0078 -
           18906900-18907082,18907104-18907337,18907429-18907653,
           18907739-18907909,18907994-18908109,18908215-18908369,
           18908450-18908573,18909007-18909107,18909215-18909297,
           18909383-18909607,18909694-18909810,18910488-18910640
          Length = 628

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 408 ALILHSSFRDFESRNRNSSEVQYPTLNIAHRPMKE 512
           AL+  SS+ D ES+   +   QYP  +  HRP K+
Sbjct: 125 ALVFKSSWSD-ESKISENKSFQYPHTSSVHRPSKD 158


>05_05_0353 -
           24338717-24338946,24339046-24339134,24339421-24339500,
           24339768-24339902,24340231-24340461,24340540-24340634,
           24340734-24340819,24341467-24341570,24341674-24341805,
           24341883-24341999,24342170-24342229,24342779-24342820,
           24342878-24342952,24343127-24343177,24343256-24343436,
           24343548-24343594,24343710-24343775
          Length = 606

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 17/53 (32%), Positives = 30/53 (56%)
 Frame = +3

Query: 132 VVGIIVSNAKNDENAYYPYVNMAVPATAFKDSVQKFMISKDRTAFKIWKIKEK 290
           +VG+I SNAK+   +  P++N ++P  +  + V K+    D   FKI +  +K
Sbjct: 495 MVGLITSNAKHGGGSTIPHLNFSIPCKSL-EMVFKYSAKGD---FKILEQLDK 543


>10_06_0102 +
           10758601-10758948,10759051-10759257,10759349-10759507,
           10759617-10759709,10759913-10760008,10760457-10760724,
           10760805-10761047,10761298-10761422,10761499-10761615,
           10761705-10761779,10761886-10761942,10762035-10762139,
           10762244-10762330,10762790-10763047,10763075-10763263,
           10763418-10763528,10763640-10763729,10763814-10763990,
           10764075-10764152,10764412-10764726,10764819-10765162,
           10765304-10765541,10765631-10765998,10766106-10766316,
           10766622-10766801,10766886-10769045,10769151-10769207
          Length = 2251

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 561 LTIAHRLLYKA*NNRSSLS*DGVQYLTSGTVPPSY 457
           L++    LY+A +  SS+  D V YL+ G +PP +
Sbjct: 544 LSVVGGALYEASSRSSSVVTDYVGYLSKGQIPPKH 578


>09_04_0011 +
           13703564-13703766,13704685-13705526,13705628-13705704,
           13706294-13706339,13706479-13706722,13710078-13710150,
           13711119-13711235
          Length = 533

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 83  TPTSRWSNNSSDQWHRSGRHNCE 151
           T T+RWSN+S D W  S   N +
Sbjct: 461 TSTTRWSNSSRDPWLSSNSCNMD 483


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,759,498
Number of Sequences: 37544
Number of extensions: 361373
Number of successful extensions: 915
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)