Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0065
         (759 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111501-1|AAI11502.2|  566|Homo sapiens trypsin domain containi...    41   0.004
BC016840-1|AAH16840.1|  435|Homo sapiens TYSND1 protein protein.       41   0.004
AL731540-5|CAI13685.1|  566|Homo sapiens trypsin domain containi...    41   0.004
U56954-1|AAB41074.1|  274|Homo sapiens MHC class I chain-related...    32   2.0  
U56953-1|AAB41073.1|  274|Homo sapiens MHC CLASS I CHAIN RELATED...    32   2.0  
AF264740-1|AAL13171.1|  324|Homo sapiens MHC class I chain-relat...    32   2.0  
S67783-1|AAB29545.1|  336|Homo sapiens lymphocyte-specific prote...    30   7.9  

>BC111501-1|AAI11502.2|  566|Homo sapiens trypsin domain containing
           1 protein.
          Length = 566

 Score = 41.1 bits (92), Expect = 0.004
 Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
 Frame = +3

Query: 96  GGPIIRLTSGIEVVGIIVSNAK-NDENAYYPYVNMAVPATAFKDSVQKFMISKD 254
           GGP+    SG  ++GII SN + N+  A YP++N ++P T  + ++Q++  ++D
Sbjct: 482 GGPLFSNHSG-NLLGIITSNTRDNNTGATYPHLNFSIPITVLQPALQQYSQTQD 534


>BC016840-1|AAH16840.1|  435|Homo sapiens TYSND1 protein protein.
          Length = 435

 Score = 41.1 bits (92), Expect = 0.004
 Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
 Frame = +3

Query: 96  GGPIIRLTSGIEVVGIIVSNAK-NDENAYYPYVNMAVPATAFKDSVQKFMISKD 254
           GGP+    SG  ++GII SN + N+  A YP++N ++P T  + ++Q++  ++D
Sbjct: 351 GGPLFSNHSG-NLLGIITSNTRDNNTGATYPHLNFSIPITVLQPALQQYSQTQD 403


>AL731540-5|CAI13685.1|  566|Homo sapiens trypsin domain containing
           1 protein.
          Length = 566

 Score = 41.1 bits (92), Expect = 0.004
 Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
 Frame = +3

Query: 96  GGPIIRLTSGIEVVGIIVSNAK-NDENAYYPYVNMAVPATAFKDSVQKFMISKD 254
           GGP+    SG  ++GII SN + N+  A YP++N ++P T  + ++Q++  ++D
Sbjct: 482 GGPLFSNHSG-NLLGIITSNTRDNNTGATYPHLNFSIPITVLQPALQQYSQTQD 534


>U56954-1|AAB41074.1|  274|Homo sapiens MHC class I chain-related
           protein A protein.
          Length = 274

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
 Frame = +2

Query: 86  PTSRWSNN--SSDQWHRSGRHNCEQCQE*RERVLPVREHGGAGHGLQGLRA-EVHDQQGS 256
           P  +W+ +   +  W R  R      ++ R  +  +++     H LQ +R  E+H+   +
Sbjct: 45  PQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLQEIRVCEIHEDNST 104

Query: 257 NSLQNLENQREIIQSQ------WRLLPYRSKI*T*TMSISNLIR 370
            S Q+    RE+  SQ      W  +P  S+  T  M++ N ++
Sbjct: 105 RSSQHFYYDRELFLSQNLETEEW-TMPQSSRAQTLAMNVRNFLK 147


>U56953-1|AAB41073.1|  274|Homo sapiens MHC CLASS I CHAIN
           RELATED-GENE A 014 protein.
          Length = 274

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
 Frame = +2

Query: 86  PTSRWSNN--SSDQWHRSGRHNCEQCQE*RERVLPVREHGGAGHGLQGLRA-EVHDQQGS 256
           P  +W+ +   +  W R  R      ++ R  +  +++     H LQ +R  E+H+   +
Sbjct: 45  PQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLQEIRVCEIHEDNST 104

Query: 257 NSLQNLENQREIIQSQ------WRLLPYRSKI*T*TMSISNLIR 370
            S Q+    RE+  SQ      W  +P  S+  T  M++ N ++
Sbjct: 105 RSSQHFYYDRELFLSQNLETEEW-TMPQSSRAQTLAMNVRNFLK 147


>AF264740-1|AAL13171.1|  324|Homo sapiens MHC class I chain-related
           protein A protein.
          Length = 324

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
 Frame = +2

Query: 86  PTSRWSNN--SSDQWHRSGRHNCEQCQE*RERVLPVREHGGAGHGLQGLRA-EVHDQQGS 256
           P  +W+ +   +  W R  R      ++ R  +  +++     H LQ +R  E+H+   +
Sbjct: 44  PQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLQEIRVCEIHEDNST 103

Query: 257 NSLQNLENQREIIQSQ------WRLLPYRSKI*T*TMSISNLIR 370
            S Q+    RE+  SQ      W  +P  S+  T  M++ N ++
Sbjct: 104 RSSQHFYYDRELFLSQNLETEEW-TMPQSSRAQTLAMNVRNFLK 146


>S67783-1|AAB29545.1|  336|Homo sapiens lymphocyte-specific protein
           1 protein.
          Length = 336

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +2

Query: 68  ENQTITPTSRWSNNSSDQWHRSGRHNCEQCQE*RERVLPVREHGGAGH 211
           E + + PT++WS    ++      H  EQCQ  R+R L  ++  G GH
Sbjct: 12  ERELLGPTAQWSVEDEEE----AVH--EQCQHERDRQLQAQDEEGGGH 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,875,114
Number of Sequences: 237096
Number of extensions: 2001712
Number of successful extensions: 3746
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3746
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)