Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0064
(790 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 170 1e-42
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 141 4e-34
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 138 4e-33
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 137 7e-33
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 111 4e-25
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 100 2e-21
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 100 2e-21
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 100 2e-21
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 97 1e-20
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 85 5e-17
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 78 6e-15
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 78 6e-15
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 78 6e-15
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 76 3e-14
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 76 3e-14
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 75 8e-14
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 75 8e-14
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 73 2e-13
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 73 2e-13
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 73 2e-13
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 72 4e-13
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 72 4e-13
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 72 4e-13
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 71 7e-13
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 71 7e-13
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 65 5e-11
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 62 3e-10
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 62 4e-10
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 62 6e-10
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 60 2e-09
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 55 7e-08
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 55 7e-08
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 52 4e-07
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 50 2e-06
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 50 3e-06
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 50 3e-06
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 44 1e-04
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 37 0.014
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 37 0.019
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 35 0.076
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 34 0.13
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 33 0.23
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 33 0.23
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 31 0.94
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 31 0.94
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 31 1.2
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 30 2.2
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 30 2.2
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 29 2.9
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 29 2.9
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 3.8
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 5.0
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 5.0
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 5.0
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 28 6.6
Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical pr... 28 8.8
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 170 bits (413), Expect = 1e-42
Identities = 82/169 (48%), Positives = 120/169 (71%), Gaps = 1/169 (0%)
Frame = +2
Query: 260 KNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYK 439
K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + + ++
Sbjct: 92 KDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHELLYGK-FQ 150
Query: 440 EPTPIQAQGWPIAMSGKNLVGVP-TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAP 616
+PT IQ+ WPIAMSG++++ + TGSGKTLA++LPA+VHI Q +RG+GP LVL P
Sbjct: 151 KPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLP 210
Query: 617 TRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
TRELAQQ+Q+V+ DF H+ ++ TC+FGGA K QARDLERGV+IV+AT
Sbjct: 211 TRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVAT 259
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 141 bits (342), Expect = 4e-34
Identities = 67/172 (38%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Frame = +2
Query: 254 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 433
FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 225 FNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSE 284
Query: 434 YKEPTPIQAQGWPIAMSGKNLVGVP-TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 610
Y++PTPIQA P A+SG++++G+ TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++
Sbjct: 285 YEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIV 344
Query: 611 APTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE-RGVEIVIAT 763
PTRELA Q+ Q A F + C +GG K EQ+ +L+ G E+V+ T
Sbjct: 345 VPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCT 396
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 138 bits (334), Expect = 4e-33
Identities = 68/153 (44%), Positives = 98/153 (64%), Gaps = 5/153 (3%)
Frame = +2
Query: 320 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 499
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 500 GV-PTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFG 664
GV TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFG 402
Query: 665 HTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
++ V GGA + +Q L GVE+VIAT
Sbjct: 403 KLLGIKTVSVIGGASREDQGMKLRMGVEVVIAT 435
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 137 bits (332), Expect = 7e-33
Identities = 71/172 (41%), Positives = 102/172 (59%), Gaps = 2/172 (1%)
Frame = +2
Query: 254 FNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 430
F KNFY + + + EV+ YR + +TV G++ PI+ + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 431 GYKEPTPIQAQGWPIAMSGKNLVGVP-TGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 607
Y +PT IQAQ P MSG++++G+ TGSGKTLA++LP HI +QP + GDGPIA++
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVI 382
Query: 608 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
LAPTRELA Q + A F ++ C +GG EQ DL+RG EIV+ T
Sbjct: 383 LAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCT 434
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 111 bits (268), Expect = 4e-25
Identities = 61/147 (41%), Positives = 93/147 (63%), Gaps = 8/147 (5%)
Frame = +2
Query: 347 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGV-PTGSG 520
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV TGSG
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 521 KTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFGHTSYVR 682
KTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ + + Y +
Sbjct: 134 KTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-K 192
Query: 683 NTCVFGGAPKREQARDLERGVEIVIAT 763
+ C++GG + EQ GVEIVIAT
Sbjct: 193 SVCLYGGGSRPEQVEACRGGVEIVIAT 219
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 99.5 bits (237), Expect = 2e-21
Identities = 63/157 (40%), Positives = 85/157 (54%), Gaps = 12/157 (7%)
Frame = +2
Query: 329 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-V 505
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 183
Query: 506 PTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQIQQVAA 655
TGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 243
Query: 656 DFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIAT 763
F + S ++ ++GG R+Q L G I+IAT
Sbjct: 244 KFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIAT 280
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 99.5 bits (237), Expect = 2e-21
Identities = 63/157 (40%), Positives = 85/157 (54%), Gaps = 12/157 (7%)
Frame = +2
Query: 329 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-V 505
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 167
Query: 506 PTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQIQQVAA 655
TGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 168 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 227
Query: 656 DFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIAT 763
F + S ++ ++GG R+Q L G I+IAT
Sbjct: 228 KFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIAT 264
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 99.5 bits (237), Expect = 2e-21
Identities = 63/157 (40%), Positives = 85/157 (54%), Gaps = 12/157 (7%)
Frame = +2
Query: 329 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-V 505
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 164
Query: 506 PTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQIQQVAA 655
TGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 165 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 224
Query: 656 DFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIAT 763
F + S ++ ++GG R+Q L G I+IAT
Sbjct: 225 KFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIAT 261
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 97.5 bits (232), Expect = 1e-20
Identities = 59/174 (33%), Positives = 93/174 (53%), Gaps = 11/174 (6%)
Frame = +2
Query: 275 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 451
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 452 IQAQGWPIAMSGKNLVGV-PTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPT 619
IQ QG P+A+SG++++G+ TGSGKT+ ++LP ++ Q P R +GP L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
Query: 620 RELAQQIQQVAAD----FGHTSY--VRNTCVFGGAPKREQARDLERGVEIVIAT 763
RELA+QI + + G +R GG P EQA+D+ G+ IV+AT
Sbjct: 276 RELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVAT 329
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 85.0 bits (201), Expect = 5e-17
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Frame = +2
Query: 338 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTG 514
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ TG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 515 SGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQIQQVAADF 661
SGKT A+++P + I P R+ P ALVL+PTREL+ QI + F
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF 273
Query: 662 GHTSYVRNTCVFGGAPK-REQARDLERGVEIVIAT 763
+ + + + ++GG ++Q L G I+IAT
Sbjct: 274 AYRTPITSALLYGGRENYKDQIHKLRLGCHILIAT 308
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 78.2 bits (184), Expect = 6e-15
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 5/137 (3%)
Frame = +2
Query: 368 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILP 544
P + F EAN + +Q+ V GY + TPIQ P+ G +++ TGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 545 AIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 712
+ + + + G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 713 REQARDLERGVEIVIAT 763
+E+G I++ T
Sbjct: 459 GYNKGQIEKGATIIVGT 475
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 78.2 bits (184), Expect = 6e-15
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 5/137 (3%)
Frame = +2
Query: 368 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILP 544
P + F EAN + +Q+ V GY + TPIQ P+ G +++ TGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 545 AIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 712
+ + + + G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 713 REQARDLERGVEIVIAT 763
+E+G I++ T
Sbjct: 459 GYNKGQIEKGATIIVGT 475
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 78.2 bits (184), Expect = 6e-15
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 5/137 (3%)
Frame = +2
Query: 368 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILP 544
P + F EAN + +Q+ V GY + TPIQ P+ G +++ TGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 545 AIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 712
+ + + + G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 713 REQARDLERGVEIVIAT 763
+E+G I++ T
Sbjct: 459 GYNKGQIEKGATIIVGT 475
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 76.2 bits (179), Expect = 3e-14
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Frame = +2
Query: 362 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVP-TGSGKTLAYI 538
H +++ V + ++ G+ +PTPIQ + P M GK++V + TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 539 LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 718
+P + + R G AL+++PTRELA Q +V + G + +R C+ GG E
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEE 135
Query: 719 QARDLERGVEIVIAT 763
Q + +I++AT
Sbjct: 136 QFSTIHENPDILLAT 150
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 76.2 bits (179), Expect = 3e-14
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Frame = +2
Query: 362 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVP-TGSGKTLAYI 538
H +++ V + ++ G+ +PTPIQ + P M GK++V + TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 539 LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 718
+P + + R G AL+++PTRELA Q +V + G + +R C+ GG E
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEE 135
Query: 719 QARDLERGVEIVIAT 763
Q + +I++AT
Sbjct: 136 QFSTIHENPDILLAT 150
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 74.5 bits (175), Expect = 8e-14
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 5/137 (3%)
Frame = +2
Query: 368 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILP 544
P + F +++ P +++ V+ GY TPIQ P+ GK+++ TGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 545 AIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 712
+ + + + G +G P ++L PTRELA QI F + S + V+GG
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINV 415
Query: 713 REQARDLERGVEIVIAT 763
+ +G I++ T
Sbjct: 416 GYNKSQIMKGCTIIVGT 432
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 74.5 bits (175), Expect = 8e-14
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 5/137 (3%)
Frame = +2
Query: 368 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILP 544
P + F +++ P +++ V+ GY TPIQ P+ GK+++ TGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 545 AIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 712
+ + + + G +G P ++L PTRELA QI F + S + V+GG
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINV 415
Query: 713 REQARDLERGVEIVIAT 763
+ +G I++ T
Sbjct: 416 GYNKSQIMKGCTIIVGT 432
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Frame = +2
Query: 380 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPAIVH 556
F EAN + +++ V GY + TPIQ P+ G +++ TGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 557 INNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 724
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 725 RDLERGVEIVIAT 763
+E+G I++ T
Sbjct: 674 GQIEKGATIIVGT 686
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Frame = +2
Query: 380 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPAIVH 556
F EAN + +++ V GY + TPIQ P+ G +++ TGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 557 INNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 724
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 725 RDLERGVEIVIAT 763
+E+G I++ T
Sbjct: 674 GQIEKGATIIVGT 686
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Frame = +2
Query: 380 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPAIVH 556
F EAN + +++ V GY + TPIQ P+ G +++ TGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 557 INNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 724
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 725 RDLERGVEIVIAT 763
+E+G I++ T
Sbjct: 674 GQIEKGATIIVGT 686
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 72.1 bits (169), Expect = 4e-13
Identities = 40/132 (30%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Frame = +2
Query: 371 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPA 547
++ F++ + + +G+ G+++P+ IQ + +GK+++ +G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 548 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 727
+ I+++ P + ALV+APTRELAQQIQ+V + G V GG R+ R
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQR 142
Query: 728 DLERGVEIVIAT 763
LE G+ +V+ T
Sbjct: 143 KLEAGIHVVVGT 154
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 72.1 bits (169), Expect = 4e-13
Identities = 40/132 (30%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Frame = +2
Query: 371 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPA 547
++ F++ + + +G+ G+++P+ IQ + +GK+++ +G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 548 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 727
+ I+++ P + ALV+APTRELAQQIQ+V + G V GG R+ R
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQR 142
Query: 728 DLERGVEIVIAT 763
LE G+ +V+ T
Sbjct: 143 KLEAGIHVVVGT 154
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 72.1 bits (169), Expect = 4e-13
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Frame = +2
Query: 380 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPAIVH 556
FE+ N + + GY +PTPIQ P+A++GK++ TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 557 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 736
+ +P + LVL PTRELA Q+ QV + GG + Q L
Sbjct: 210 MIYRP--KGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALR 267
Query: 737 RGVEIVIAT 763
G ++V+AT
Sbjct: 268 SGPDVVVAT 276
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 71.3 bits (167), Expect = 7e-13
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Frame = +2
Query: 380 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVP-TGSGKTLAYILPAIVH 556
F + ++ Q ++TM K TP+QA P + G +++G TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 557 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 736
++ P G AL+L PTRELA QI + G ++ + + GG QAR+L
Sbjct: 151 LSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELS 205
Query: 737 RGVEIVIAT 763
+V+AT
Sbjct: 206 ERPHVVVAT 214
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 71.3 bits (167), Expect = 7e-13
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Frame = +2
Query: 380 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVP-TGSGKTLAYILPAIVH 556
F + ++ Q ++TM K TP+QA P + G +++G TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 557 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 736
++ P G AL+L PTRELA QI + G ++ + + GG QAR+L
Sbjct: 151 LSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELS 205
Query: 737 RGVEIVIAT 763
+V+AT
Sbjct: 206 ERPHVVVAT 214
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 65.3 bits (152), Expect = 5e-11
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Frame = +2
Query: 413 QGVKTMGYKEPTPIQAQGWPIAMSGKN-LVGVPTGSGKTLAYILPAIVHINNQPPIRRGD 589
+ V+ +G+ T IQA+ + GK+ L TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 590 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
G ++++PTREL+ Q V ++ S + V GG+ + + L +GV I++AT
Sbjct: 140 GTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVAT 197
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 63.7 bits (148), Expect = 1e-10
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 9/131 (6%)
Frame = +2
Query: 398 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN--LVGVPTGSGKTLAYILPAIVHI---- 559
P+ V + ++ MG+ EPT IQ+ P A+ + L TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 560 --NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL 733
+ + GP AL++APTREL QI + T+ + T + GG + +Q R +
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERII 282
Query: 734 -ERGVEIVIAT 763
++ +IV+AT
Sbjct: 283 SQQRPDIVVAT 293
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 62.5 bits (145), Expect = 3e-10
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Frame = +2
Query: 380 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVP-TGSGKTLAYILPAIVH 556
F E + + +G+ +P+ IQ P A+ GK+++G+ TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 557 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 736
+ + P LVL PTRELA QI Q G + + GG QA L
Sbjct: 106 LLDHP-----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALA 160
Query: 737 RGVEIVIAT 763
R I++AT
Sbjct: 161 RRPHIIVAT 169
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 62.1 bits (144), Expect = 4e-10
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = +2
Query: 416 GVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPAIVHINNQPPIRRGDG 592
G+ G+++P+PIQ +A++G++++ G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ- 113
Query: 593 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
A+V+ PTRELA Q Q+ + ++ GG R+ L V +VIAT
Sbjct: 114 --AMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIAT 168
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 61.7 bits (143), Expect = 6e-10
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Frame = +2
Query: 365 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYIL 541
N I F++ + + +G+ G+++P+ IQ + P + ++++ +G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 542 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 721
+ ++ Q +R AL+L+PTRELA QIQ+V G V+ GG E
Sbjct: 83 SVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGED 137
Query: 722 ARDLERGVEIVIAT 763
R L+ G +V T
Sbjct: 138 IRKLDYGQHVVSGT 151
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 60.1 bits (139), Expect = 2e-09
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Frame = +2
Query: 407 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPAIVHI-----NNQ 568
+ + +K + Y IQ P + G +++G T +GKT A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 569 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 748
R+ DGP+AL+LAPTRELA QI + + + + +G + + ++ G +
Sbjct: 452 NKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCD 511
Query: 749 IVIAT 763
I+I T
Sbjct: 512 ILIGT 516
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 60.1 bits (139), Expect = 2e-09
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Frame = +2
Query: 371 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPA 547
I F++ + + +G+ G+++P+ IQ + P + ++++ +G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 548 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 727
+ ++ Q +R AL+L+PTRELA QIQ+V G V+ GG E R
Sbjct: 85 LQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIR 139
Query: 728 DLERGVEIVIAT 763
L+ G +V T
Sbjct: 140 KLDYGQHVVSGT 151
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 57.2 bits (132), Expect = 1e-08
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Frame = +2
Query: 287 VLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 466
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 467 WPIAMSGKN-LVGVPTGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTREL 628
P +N L PTGSGKTLA+ LP I+ + + + +A+VL PTREL
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTREL 216
Query: 629 AQQ 637
A Q
Sbjct: 217 AAQ 219
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 54.8 bits (126), Expect = 7e-08
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Frame = +2
Query: 398 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVP-TGSGKTLAYILPAIVHI----- 559
P + +K M PTPIQ + M G ++V TGSGKTLA+++P ++ +
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFE 803
Query: 560 NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE- 736
++ P L++APTREL Q A + + ++ FGG + + L
Sbjct: 804 KDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRS 863
Query: 737 -RGVEIVIAT 763
+ I++AT
Sbjct: 864 FSQLNILVAT 873
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 54.8 bits (126), Expect = 7e-08
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Frame = +2
Query: 398 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVP-TGSGKTLAYILPAIVHI----- 559
P + +K M PTPIQ + M G ++V TGSGKTLA+++P ++ +
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFE 803
Query: 560 NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE- 736
++ P L++APTREL Q A + + ++ FGG + + L
Sbjct: 804 KDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRS 863
Query: 737 -RGVEIVIAT 763
+ I++AT
Sbjct: 864 FSQLNILVAT 873
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 54.0 bits (124), Expect = 1e-07
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Frame = +2
Query: 434 YKEPTPIQAQGWPIAMSGKN--LVGVPTGSGKTLAYILPAIVHI------NNQPPIRRGD 589
+ EPT IQ+ P A+ + L TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 590 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL-ERGVEIVIAT 763
GP AL++APTREL QI + T+ + T + GG + +Q R + ++ +IV+AT
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVAT 126
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Frame = +2
Query: 380 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPAIVH 556
F + + + + + +G+++ +Q +A+ KN++G TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 557 INNQPPIRRGD-GPIALVLAPTRELAQQIQQV 649
+ + G GP A+++APT+EL QI ++
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 50.4 bits (115), Expect = 1e-06
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Frame = +2
Query: 371 IQYFEEANFPDYVQQGVKTMGYKEPTPIQA-QGWPIAMSGKNLVGVPTGSGKTLAYILPA 547
++ F E P+ ++ V YK T +Q G + +V PTGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 548 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 727
+ I N G AL+L+P+REL QI V F + V GG + +
Sbjct: 68 MRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIK 125
Query: 728 DLE-RGVEIVIAT 763
+ + V I++AT
Sbjct: 126 MFKNKNVNILVAT 138
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Frame = +2
Query: 413 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVP-TGSGKTLAYILPAIVHINNQPPIRRGD 589
+G+K Y +PT IQ +++G ++VG TGSGKTLA ++P ++ +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDY 147
Query: 590 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
G AL+++PTRELA Q G V GG+ + R+ G+ I++ T
Sbjct: 148 GLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFE-RNRISGINIIVCT 204
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 49.6 bits (113), Expect = 3e-06
Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Frame = +2
Query: 380 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN-LVGVPTGSGKTLAYILPAIVH 556
FE + +K + P+P+QA+ P+ + G++ LV +G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 557 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 736
+++ R +++ PTRE++ QI++ T R + GG+ + DL+
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLK 137
Query: 737 R-GVEIVIAT 763
+ +IVI T
Sbjct: 138 QTRPQIVIGT 147
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 49.6 bits (113), Expect = 3e-06
Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Frame = +2
Query: 380 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN-LVGVPTGSGKTLAYILPAIVH 556
FE + +K + P+P+QA+ P+ + G++ LV +G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 557 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 736
+++ R +++ PTRE++ QI++ T R + GG+ + DL+
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLK 137
Query: 737 R-GVEIVIAT 763
+ +IVI T
Sbjct: 138 QTRPQIVIGT 147
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Frame = +2
Query: 371 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVG-VPTGSGKTLAYIL 541
I F E V + + TM ++ PT IQ P+ + NL+ +G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 542 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 664
+ I+ P + LAPT ELA+QI +V G
Sbjct: 268 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Frame = +2
Query: 371 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVG-VPTGSGKTLAYIL 541
I F E V + + TM ++ PT IQ P+ + NL+ +G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 542 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 664
+ I+ P + LAPT ELA+QI +V G
Sbjct: 293 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Frame = +2
Query: 371 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVG-VPTGSGKTLAYIL 541
I F E V + + TM ++ PT IQ P+ + NL+ +G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 542 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 664
+ I+ P + LAPT ELA+QI +V G
Sbjct: 677 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 497 VGVPTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 676
+ PTGSGKT+ Y+LP + + ++P A++L P + L QI + S
Sbjct: 161 IAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVDEFKRWNDESG 216
Query: 677 VRNTCVFGGAPKRE-QARDLERG-VEIVIAT 763
V GA E +AR L +++AT
Sbjct: 217 VAKVVSLSGANDFEKEARQLASDPPNVIVAT 247
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +2
Query: 494 LVGVPTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 640
LV PTG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 133 LVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 380 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN-LVGVPTGSGKTLAYILP 544
FEE + + ++ + PT +Q++ P + G + L+ TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 34.7 bits (76), Expect = 0.076
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +2
Query: 413 QGVKTMGYKEPTPIQAQGWPIAMSGKNL-VGVPTGSGKTLAYILPAIVHINNQPPIRRGD 589
+G+ G+++P+ IQ +GK++ + GSGKT+ ++ + I+ + +
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-- 66
Query: 590 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCV 694
++LAP R +AQ+ + G V TC+
Sbjct: 67 ---VILLAPQRGMAQRAHEQLKSLGRNLNVNATCL 98
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 497 VGVPTGSGKTLAYILPAIVH 556
V +PTG+GK+L Y LPA+VH
Sbjct: 199 VSLPTGAGKSLCYQLPAVVH 218
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 33.1 bits (72), Expect = 0.23
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = +2
Query: 473 IAMSGKN-LVGVPTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 649
+A+ GKN +V PTGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 650 AADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
A+ + +V +T + G+ R++ + ++++AT
Sbjct: 359 ASISSYLDHVYHTQIIQGS-DNVPTRNVIQSKDLIVAT 395
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 33.1 bits (72), Expect = 0.23
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = +2
Query: 473 IAMSGKN-LVGVPTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 649
+A+ GKN +V PTGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 650 AADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
A+ + +V +T + G+ R++ + ++++AT
Sbjct: 359 ASISSYLDHVYHTQIIQGS-DNVPTRNVIQSKDLIVAT 395
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 31.1 bits (67), Expect = 0.94
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 476 AMSGKNLVGV-PTGSGKTLAYILPAIVHINNQ 568
A+ GKN V V PTGSGKT I A+ HI +
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER 413
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 31.1 bits (67), Expect = 0.94
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 431 GYKEPTPIQAQGW-PIAMSGKN-LVGVPTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 604
G+K PIQ Q + + S +N +V P GSGKT L + H N P + A+
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTPEAK------AV 1371
Query: 605 VLAPTRELAQQI 640
+ P ++A ++
Sbjct: 1372 YITPMEDMATKV 1383
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = +2
Query: 431 GYKEPTPIQAQGWPIAMSGKN--LVGVPTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 604
GYK IQ++ A+ K L+ PTG+GKT +L + I N DG + L
Sbjct: 471 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNH---LAEDGSVKL 527
Query: 605 ------VLAPTRELAQQI 640
+AP + L Q++
Sbjct: 528 DEFKIVYIAPMKSLVQEM 545
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +2
Query: 452 IQAQGWPIAMSGKNLV-GVPTGSGKTLAYILPAIVHI--NNQPPIRRG--DGPIALVLAP 616
+Q + G+ LV PTG GKT A+++PAI N Q P L++A
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 617 TRELAQQI 640
T L Q+
Sbjct: 79 TSALVDQL 86
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 452 IQAQGWPIAMSGKNLV-GVPTGSGKTLAYILPAI 550
+Q + G+ LV PTG GKT A+++PAI
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 152
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Frame = +2
Query: 431 GYKEPTPIQAQGWPIAMSGKN--LVGVPTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 604
GYK IQ++ A+ K L+ PTG+GKT +L + I N DG + L
Sbjct: 273 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNH---LAEDGSVKL 329
Query: 605 ------VLAPTRELAQQI 640
+APT+ L Q++
Sbjct: 330 EEFKIVYIAPTKSLVQEM 347
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 479 MSGKNLVGVPTGSGKTLAYILPAIV 553
M V +PTG+GK+L Y LPA++
Sbjct: 261 MGHDTFVLMPTGAGKSLCYQLPAVI 285
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 479 MSGKNLVGVPTGSGKTLAYILPAIV 553
M V +PTG+GK+L Y LPA++
Sbjct: 261 MGHDTFVLMPTGAGKSLCYQLPAVI 285
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 642 SKLLQILDTHLMFVTRVCLVVLLKESK 722
+KLL LDT +FVTR C ++ K +K
Sbjct: 372 AKLLFTLDTDTIFVTRRCFAIVSKANK 398
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 137 RRIIAEFVASSKFGTTVSTAIIPV 66
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 137 RRIIAEFVASSKFGTTVSTAIIPV 66
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -1
Query: 493 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 314
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 313 D 311
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -1
Query: 493 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 314
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 313 D 311
+
Sbjct: 86 N 86
>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
protein Y54E2A.6 protein.
Length = 1798
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 449 PIQAQGW-PIAMSGKN-LVGVPTGSGKTLAYILPAIVHINNQPPIR 580
PIQAQ + + + K+ L+G PTGSGKTL L + + P ++
Sbjct: 963 PIQAQVFFCLYKTDKSALIGAPTGSGKTLCAELAMFRLLQDHPGMK 1008
>Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical
protein F59B2.2 protein.
Length = 460
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = -1
Query: 520 AGTRWYAN*ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYS 341
AG WY N IL R S L+ R + + H +K+C + + + N +
Sbjct: 78 AGLNWYGNHILVRASQH--LAKKSDRSALDYG-----HFAKKVCDYSDIRFLRNNSKAVM 130
Query: 340 YLVIISVLF 314
Y V +++LF
Sbjct: 131 YFVNVTILF 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,803,478
Number of Sequences: 27780
Number of extensions: 406157
Number of successful extensions: 1339
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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