Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0063
         (785 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.60 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.60 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   2.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.8  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
 Frame = +1

Query: 571 VVTGAHGHLQPKYATHLEI*VLRSQV*LQRLPRPSNRNASLLHGRKVMVPTRADSQEVLP 750
           VVTG  GH  P+Y        L S+   +    P   N S    R + +P   DSQ +L 
Sbjct: 519 VVTGVIGHRMPRYCLFGNTVNLTSRT--ETTGEPGKINVSEDAYRYLCMPENQDSQFLLE 576

Query: 751 ---PVNISYKS 774
              PV +  KS
Sbjct: 577 YRGPVTMKGKS 587


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
 Frame = +1

Query: 571 VVTGAHGHLQPKYATHLEI*VLRSQV*LQRLPRPSNRNASLLHGRKVMVPTRADSQEVLP 750
           VVTG  GH  P+Y        L S+   +    P   N S    R + +P   DSQ +L 
Sbjct: 519 VVTGVIGHRMPRYCLFGNTVNLTSRT--ETTGEPGKINVSEDAYRYLCMPENQDSQFLLE 576

Query: 751 ---PVNISYKS 774
              PV +  KS
Sbjct: 577 YRGPVTMKGKS 587


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/68 (19%), Positives = 29/68 (42%)
 Frame = -3

Query: 528 WTGVRTQRLPTTSNYANYNFAGMIFITRCYSFVVNVHFTYIASSVHRARVEDMALVDYGL 349
           W  VRT+ +P        +   +IF +    ++      +    ++RA V     +  G 
Sbjct: 185 WRAVRTEEVPEDKCPFTEHLGYLIFSSTISFYLPLFVMVFTYYKIYRAAVIQTKSLKLGT 244

Query: 348 EELMRAAG 325
           ++++ A+G
Sbjct: 245 KQVLMASG 252


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 328 WTGTSDPQICG 296
           W  T DPQ CG
Sbjct: 392 WEDTQDPQGCG 402


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 328 WTGTSDPQICG 296
           W  T DPQ CG
Sbjct: 392 WEDTQDPQGCG 402


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,873
Number of Sequences: 438
Number of extensions: 5881
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)