Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0062
(766 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 138 6e-34
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 119 5e-28
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 116 4e-27
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 109 4e-25
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 86 5e-18
SPBC13E7.10c |brf1|SPBC30D10.20|transcription factor TFIIIB comp... 30 0.42
SPAC664.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 30 0.42
SPCP31B10.03c |med31|soh1, sep10|mediator complex subunit Med31|... 29 0.73
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom... 28 1.3
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 2.2
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 27 2.2
SPAC27E2.06c |||methionine-tRNA ligase, mitochondrial|Schizosacc... 26 5.1
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 26 6.8
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 26 6.8
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 26 6.8
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 25 9.0
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 25 9.0
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.0
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 25 9.0
SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 9.0
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 138 bits (335), Expect = 6e-34
Identities = 67/84 (79%), Positives = 74/84 (88%)
Frame = +2
Query: 2 GEQDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTASDNQHTVTIQVY 181
GE+ +D IVLLDV PLT+GIET GGVMTKLI RNT IPT+KSQIFSTA DNQ+TV IQVY
Sbjct: 411 GEEGSDNIVLLDVIPLTLGIETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVY 470
Query: 182 EGERPMTKDNHLLGKFDLTGIPPA 253
EGER +TKDN+LLGKFDL GIPPA
Sbjct: 471 EGERTLTKDNNLLGKFDLRGIPPA 494
Score = 99.5 bits (237), Expect = 5e-22
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 PSCSRGIPQIEVTFEIDANGILQVSAEDK-GTGNREKIVITNDQNRLTPEDIERMIXXXX 420
P RG+PQIEVTFE+DANG+L VSA DK G G EK+VI ND+ RL+ EDIERM+
Sbjct: 492 PPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAE 551
Query: 421 XXXXXXXXXXXRVESRNELESYAYSIKNQ 507
R+E+RN LE+YAYS+K Q
Sbjct: 552 EFAEEDKILKERIEARNTLENYAYSLKGQ 580
Score = 52.8 bits (121), Expect = 5e-08
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +3
Query: 513 DKEKLGAKVTDDDKAKMEEALDAAIKWLE-DNQDAESEEYKKQKKTLEDVVQPIIAKLY 686
D E+LG KV +DK + +A++ +WLE +DA EE++ Q++ L+ VV PI KLY
Sbjct: 583 DDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 119 bits (286), Expect = 5e-28
Identities = 58/82 (70%), Positives = 67/82 (81%)
Frame = +2
Query: 8 QDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTASDNQHTVTIQVYEG 187
+ T ++LLDV PL+MGIET GGVMT LI RNT IPTKKS+IFST SDNQ V IQV+EG
Sbjct: 384 EKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEG 443
Query: 188 ERPMTKDNHLLGKFDLTGIPPA 253
ER TKD +LLGKF+L+GIPPA
Sbjct: 444 ERARTKDCNLLGKFELSGIPPA 465
Score = 101 bits (243), Expect = 9e-23
Identities = 46/89 (51%), Positives = 62/89 (69%)
Frame = +1
Query: 244 PSCSRGIPQIEVTFEIDANGILQVSAEDKGTGNREKIVITNDQNRLTPEDIERMIXXXXX 423
P RG+PQIEVTF++DANGIL VSA +KGTG +KI ITND+ RL+ E+I+RM+
Sbjct: 463 PPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEK 522
Query: 424 XXXXXXXXXXRVESRNELESYAYSIKNQL 510
R++++N LESYAYS++N L
Sbjct: 523 YKAEDEAESGRIQAKNHLESYAYSLRNSL 551
Score = 53.6 bits (123), Expect = 3e-08
Identities = 24/60 (40%), Positives = 37/60 (61%)
Frame = +3
Query: 513 DKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAKLYQA 692
D L KV DK +++A+ I+WL+ N A +E++ ++K LE V PI+AK+YQA
Sbjct: 552 DDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQA 611
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 116 bits (279), Expect = 4e-27
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = +2
Query: 8 QDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTASDNQHTVTIQVYEG 187
+ T ++LLDV PL++GIET GGVMT LI RNT IPTKKS++FST +DNQ V IQV+EG
Sbjct: 384 EKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEG 443
Query: 188 ERPMTKDNHLLGKFDLTGIPPA 253
ER TKD +LLGKF+L+GIPPA
Sbjct: 444 ERARTKDCNLLGKFELSGIPPA 465
Score = 101 bits (243), Expect = 9e-23
Identities = 46/89 (51%), Positives = 62/89 (69%)
Frame = +1
Query: 244 PSCSRGIPQIEVTFEIDANGILQVSAEDKGTGNREKIVITNDQNRLTPEDIERMIXXXXX 423
P RG+PQIEVTF++DANGIL VSA +KGTG +KI ITND+ RL+ E+I+RM+
Sbjct: 463 PPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEK 522
Query: 424 XXXXXXXXXXRVESRNELESYAYSIKNQL 510
R++++N LESYAYS++N L
Sbjct: 523 YKAEDEAETSRIQAKNHLESYAYSLRNSL 551
Score = 54.8 bits (126), Expect = 1e-08
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +3
Query: 453 TSRVK-KRARKLCLLNQKPTQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEY 629
TSR++ K + + + + D L KV DK +++A+ I+WL+ N A +EY
Sbjct: 531 TSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEY 590
Query: 630 KKQKKTLEDVVQPIIAKLYQA 692
+ ++K LE V PI+AK+YQA
Sbjct: 591 EDKQKELEGVANPIMAKIYQA 611
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 109 bits (262), Expect = 4e-25
Identities = 49/77 (63%), Positives = 63/77 (81%)
Frame = +2
Query: 23 IVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTASDNQHTVTIQVYEGERPMT 202
+VLLDV PL++GIET+GGV T+LI RNT IPT+KSQ+FSTA+D Q V I+V++GER +
Sbjct: 432 LVLLDVTPLSLGIETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELV 491
Query: 203 KDNHLLGKFDLTGIPPA 253
+DN L+G F LTGI PA
Sbjct: 492 RDNKLIGNFQLTGIAPA 508
Score = 58.0 bits (134), Expect = 1e-09
Identities = 31/90 (34%), Positives = 48/90 (53%)
Frame = +1
Query: 256 RGIPQIEVTFEIDANGILQVSAEDKGTGNREKIVITNDQNRLTPEDIERMIXXXXXXXXX 435
+G PQIEV+F++DA+GI+ VSA DK T N++ + + LT +IE M+
Sbjct: 510 KGQPQIEVSFDVDADGIINVSARDKAT-NKDSSITVAGSSGLTDSEIEAMVADAEKYRAS 568
Query: 436 XXXXXXRVESRNELESYAYSIKNQLRIRKN 525
+E+ N ES I++ L I K+
Sbjct: 569 DMARKEAIENGNRAESVCTDIESNLDIHKD 598
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 86.2 bits (204), Expect = 5e-18
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = +2
Query: 14 TDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTASDNQHTVTIQVYEGER 193
T ++LLDV PL++G+ G V + PRNT IPT K + F+T +DNQ TVT VY+GER
Sbjct: 391 TQDLLLLDVVPLSLGVAMEGNVFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPVYQGER 450
Query: 194 PMTKDNHLLGKFDLTGIPP 250
+N LG+F LTGIPP
Sbjct: 451 VNCAENEPLGEFQLTGIPP 469
Score = 63.3 bits (147), Expect = 4e-11
Identities = 34/99 (34%), Positives = 55/99 (55%)
Frame = +1
Query: 244 PSCSRGIPQIEVTFEIDANGILQVSAEDKGTGNREKIVITNDQNRLTPEDIERMIXXXXX 423
P RG ++E TFE+DANGIL+V+A +K TG I ITN L+ I+ MI
Sbjct: 468 PPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQEMIENADK 527
Query: 424 XXXXXXXXXXRVESRNELESYAYSIKNQLRIRKNLVLRL 540
++E++++LESY +I+ + N++++L
Sbjct: 528 FKQQDKDFAKKLEAKSQLESYISNIETTIS-EPNVMMKL 565
>SPBC13E7.10c |brf1|SPBC30D10.20|transcription factor TFIIIB complex
subunit Brf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 500
Score = 29.9 bits (64), Expect = 0.42
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +3
Query: 516 KEKLGAKVTDDDKAK-----MEEALDAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAK 680
+E++ + DDD+ + +E L W+E N+D +EE K K ED+ + I+ +
Sbjct: 389 EEEVTLEDVDDDEIEDILLDKDEILTKTQVWMELNKDYLAEEEAKNLKLQEDLKKGIVRQ 448
Query: 681 LYQARVEYRP 710
+ R YRP
Sbjct: 449 PRKRR-RYRP 457
>SPAC664.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 117
Score = 29.9 bits (64), Expect = 0.42
Identities = 13/48 (27%), Positives = 30/48 (62%)
Frame = +3
Query: 537 VTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKKTLEDVVQPIIAK 680
V D+ + E+ L+ ++ ++ N+ ESE+YK +++L V + ++A+
Sbjct: 36 VVDEYSKESEDVLENGLEHVQSNEFTESEDYKSIERSLA-VTEAVMAR 82
>SPCP31B10.03c |med31|soh1, sep10|mediator complex subunit
Med31|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -1
Query: 331 PYLQQTLAKYRWHQFQM*LQFVEYHESRRDPS*VKF 224
P+ LA++++ + + LQ++EY E R+P VKF
Sbjct: 30 PWYLNFLAQHKYFEDEAFLQYLEYMEYWREPEYVKF 65
>SPBC16C6.06 |pep1|vps10|sorting receptor for
CPY|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1466
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -2
Query: 363 SDYNLFPVSCSLIFSRHLQNTVGINFKCDFNLWNTTRAGGIPVKSNLPSK 214
S+Y+LF + + Q + + K DF W T A G P+ S + K
Sbjct: 544 SNYSLFSFNFGKFLPKECQFSNSESNKNDFEKWYTRYANGSPICSEMGKK 593
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +3
Query: 468 KRARKLCLLNQKPTQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKKT 647
+R R++ L K+K+ K ++ +EALD ++K ++ +E K K
Sbjct: 587 QRLRRMNLYEITFLSMKQKMQLKSLREEIDNTKEALDLSVKERSIQEEKLNESLKTSKTN 646
Query: 648 LEDVVQ 665
LE+ Q
Sbjct: 647 LEEQTQ 652
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +3
Query: 438 QEVEGTSRVKKRARKLCLLNQKPTQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAE 617
+E E +K ++ + Q+ EK+G + DDKAK + D + E D +
Sbjct: 207 EENETKDEIKSEKKEPEIKKQEGGSSTEKVGQPSSSDDKAKGSTSKDQPSEEEEKTSDIQ 266
Query: 618 SEEYK 632
+ K
Sbjct: 267 DRKIK 271
>SPAC27E2.06c |||methionine-tRNA ligase,
mitochondrial|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 338 PVPLSSADTCKIPLASISNVTSICGIPREQEGSQLSQIYQVN 213
PVP +S T + L ++ N S+ G P E S LS + N
Sbjct: 242 PVPGNSQQTIYVWLDALINYISVIGYPWLNEKSSLSAGWPAN 283
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 492 LNQKPTQDKEKLGAKVTDDDKAKMEEALDAAIKW--LEDNQDAESEEYKKQKKTLE 653
LNQK +D+ + ++ DD +EE +K+ E N+++E +KT++
Sbjct: 235 LNQKRKKDEADAESVLSSDDNDSIEEISIKKVKYDPHETNKESEYNLIGSSEKTID 290
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 495 NQKPTQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEE 626
+QK T ++LG K+T++ AK E+ D A + ++ + + E
Sbjct: 41 DQKATNLSDRLGPKITENVDAKSEQ--DKATNTIAEDANTKQSE 82
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/62 (22%), Positives = 29/62 (46%)
Frame = +2
Query: 38 VNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTASDNQHTVTIQVYEGERPMTKDNHL 217
+NP+T + + V+ +I VIP +K + ST + + + + G + +N+
Sbjct: 641 LNPITNILRVIQKVIQFIISAEFVIPAQKLEAISTLVEKEFHSVVYHFIGIQRSLYENYA 700
Query: 218 LG 223
G
Sbjct: 701 QG 702
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 447 EGTSRVKKRARKLCLL-NQKPTQDKEKLGAKVTDDDKAKMEEALD 578
E S +K + + LL NQ KEKL +DD+K ++E D
Sbjct: 1079 EVLSAIKSLSDSVMLLKNQIDDLAKEKLPLSSSDDEKVNIKEKTD 1123
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 25.4 bits (53), Expect = 9.0
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 507 TQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAESEEYKKQKKT-LEDVVQPII 674
TQ KE G K+ + K +E K + + E EE+ KQ KT L D V+ ++
Sbjct: 506 TQLKEFEGKKLVNITKDGLELEETDEEKAAREKLEKEYEEFAKQLKTILGDKVEKVV 562
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 25.4 bits (53), Expect = 9.0
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 549 DKAKMEEALDAAIKWLE---DNQDAESEEYKKQKKTLED 656
D + ++ L I+ LE + ++E+E+Y+KQK+ LE+
Sbjct: 150 DLLEEQQQLKLEIERLEAETERANSETEQYEKQKEALEE 188
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 296 ASISNVTSICGIPREQEGSQLSQIY--QVNDCPWSLVAHPRTL 174
AS S+V + P EQ + +I Q+ND P L +PR L
Sbjct: 42 ASESHVVDVVKDPFEQYTPEEQEILYKQINDTPAKLSGYPRIL 84
>SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 646
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 459 YSFLQLLVIIGKLLSILNH-SFNIFRCQSVLVISDYNLF 346
Y ++ L+ + S LN +FN FR +L+I DY+LF
Sbjct: 218 YHKVEKLLKSANIRSSLNSKTFNDFRTLFLLLIRDYSLF 256
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,783,533
Number of Sequences: 5004
Number of extensions: 52938
Number of successful extensions: 211
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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