Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0061
         (506 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    26   0.17 
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   2.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   2.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   4.8  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.3  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +3

Query: 270 DKKEVWSG-AGSATSAAFK-VKKGGRYQMQVELCNSDGCS 383
           +K E++    G  T++ F+ VK G  Y +    C+S GCS
Sbjct: 317 NKTEIFLNITGDKTNSVFEHVKLGSLYHISFMACSSAGCS 356


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 199 DAADVSVNWNVWTGDAA 249
           D +   V WN W G+A+
Sbjct: 104 DESKCDVFWNCWNGEAS 120


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 199 DAADVSVNWNVWTGDAA 249
           D +   V WN W G+A+
Sbjct: 104 DESKCDVFWNCWNGEAS 120


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 450 NNREASNGYHQCQLLRFRCP 391
           NNR   N Y  C L +  CP
Sbjct: 35  NNRRMVNYYAACLLSKGPCP 54


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 300 SATSAAFKVKKGGRYQMQVELC 365
           SA S   K KKG   + Q ELC
Sbjct: 167 SADSCDSKKKKGPTPRQQEELC 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,968
Number of Sequences: 336
Number of extensions: 1841
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)