Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0061
         (506 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.4  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   5.6  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   5.6  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   5.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.3  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.7  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 215 ETSAASFLVTSWL*AVAAWLTSTIANVRSPQ 123
           +    +F+VTSWL  + +++   I  V +P+
Sbjct: 653 QPGVTAFIVTSWLGYMNSFVNPVIYTVFNPE 683


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 11  LVSFFVEPVMGHRMI 55
           L+S+F+EP+  H ++
Sbjct: 451 LLSYFIEPIYFHSIV 465


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/25 (32%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +1

Query: 124 WGERTFAIV-EVNQAATAYNQLVTK 195
           WG++TF I+ + N   ++ N +  K
Sbjct: 70  WGDKTFVIIMKFNGVPSSLNVITNK 94


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 288 SGAGSATSAAFKVKKGGRYQMQVELC 365
           +G GS+     + KKG   + Q ELC
Sbjct: 162 NGYGSSDGCDARKKKGPTPRQQEELC 187


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 238 GDAADNPESCSIRRKSGAVPA 300
           G   ++P  C+I  K+ AVPA
Sbjct: 85  GKEGEDPYRCNICGKTFAVPA 105


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 459 HQ*NNREASNGYHQC 415
           HQ +N+E S   H C
Sbjct: 54  HQDHNKEKSKNNHHC 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,723
Number of Sequences: 438
Number of extensions: 2024
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)