Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0060
         (760 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78417-2|CAB01692.1|  258|Caenorhabditis elegans Hypothetical pr...    70   2e-12
Z78417-1|CAB01684.1|  255|Caenorhabditis elegans Hypothetical pr...    70   2e-12
Z72508-4|CAA96637.2|  216|Caenorhabditis elegans Hypothetical pr...    58   5e-09
AC006794-3|AAK68503.2|  192|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z83238-7|CAB05797.1|  313|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical p...    28   6.3  
AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z78417-2|CAB01692.1|  258|Caenorhabditis elegans Hypothetical
           protein C35C5.3b protein.
          Length = 258

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 26/68 (38%), Positives = 45/68 (66%)
 Frame = +3

Query: 294 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMC 473
           T+ I+YC SCGYK+ F+ +    ++KYP + + GAN+ P  +  Y+++ + F KM V++ 
Sbjct: 97  TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 156

Query: 474 ILSGVNIF 497
           +L G+N F
Sbjct: 157 VLGGINPF 164



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 20/38 (52%), Positives = 29/38 (76%)
 Frame = +2

Query: 545 NKLYACMMMFFLANMIEGQLISSGAFEISLNNIPLWSK 658
           NK+ +CM++F L N++E  LIS+GAFE+ L N  +WSK
Sbjct: 181 NKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIWSK 218


>Z78417-1|CAB01684.1|  255|Caenorhabditis elegans Hypothetical
           protein C35C5.3a protein.
          Length = 255

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 26/68 (38%), Positives = 45/68 (66%)
 Frame = +3

Query: 294 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMC 473
           T+ I+YC SCGYK+ F+ +    ++KYP + + GAN+ P  +  Y+++ + F KM V++ 
Sbjct: 94  TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 153

Query: 474 ILSGVNIF 497
           +L G+N F
Sbjct: 154 VLGGINPF 161



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 20/38 (52%), Positives = 29/38 (76%)
 Frame = +2

Query: 545 NKLYACMMMFFLANMIEGQLISSGAFEISLNNIPLWSK 658
           NK+ +CM++F L N++E  LIS+GAFE+ L N  +WSK
Sbjct: 178 NKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIWSK 215


>Z72508-4|CAA96637.2|  216|Caenorhabditis elegans Hypothetical
           protein F28H7.4 protein.
          Length = 216

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 23/70 (32%), Positives = 42/70 (60%)
 Frame = +3

Query: 297 MNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMCI 476
           + I YC SCGYK+ F  +    ++KYP + + G N+ P  +   L++I+G  K+ +I  +
Sbjct: 72  LTILYCVSCGYKQAFNQFYEFAKEKYPGLVIEGGNFSPDFWKGCLAQIVGVAKIGLIAIV 131

Query: 477 LSGVNIFAWL 506
           ++G N F ++
Sbjct: 132 ITGSNPFEYI 141



 Score = 36.7 bits (81), Expect = 0.018
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +2

Query: 545 NKLYACMMMFFLANMIEGQLISSGAFEISLNNIPLWSK 658
           N+    +++F + N+ E  L S+GAFEI L +  +WSK
Sbjct: 155 NRFSYSLLVFMIGNLFESTLSSTGAFEIFLGDKQIWSK 192


>AC006794-3|AAK68503.2|  192|Caenorhabditis elegans Hypothetical
           protein Y50D4A.2 protein.
          Length = 192

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 398 SSNDRNLWVFLLYNSCIVFKYLFVATRITVIDIHCMPDT 282
           S N RNL +  +    + F  LF+   ++ I  +C+PDT
Sbjct: 99  SENSRNLKIDTVVKVFMQFSALFLLRHVSAITAYCIPDT 137


>Z83238-7|CAB05797.1|  313|Caenorhabditis elegans Hypothetical
           protein T08G3.8 protein.
          Length = 313

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +2

Query: 74  KNKYSVVKRNNHCESNDLHPFIY*IRLEKISVCQTICFT*TRCYSFVLY 220
           K  Y  + R N C S DLHP ++     +  + Q  CF    C  F+++
Sbjct: 34  KLSYYFLYRKNKCYSTDLHPVLF----RQFMIMQIACFF-NVCIKFLIF 77


>U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical
           protein K08F11.2 protein.
          Length = 886

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 316 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 423
           +L A KR  K  +E  N NT+R  SL+L ++++ LT
Sbjct: 14  LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49


>U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical
           protein K08D10.1 protein.
          Length = 895

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 316 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 423
           +L A KR  K  +E  N NT+R  SL+L ++++ LT
Sbjct: 14  LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49


>AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical
           protein Y20F4.5 protein.
          Length = 725

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 316 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 423
           +L A KR  K  +E  N NT+R  SL+L ++++ LT
Sbjct: 14  LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49


>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
            K03H1.5 protein.
          Length = 1385

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +2

Query: 518  PAWWSWCLENKL-YACMMMFFLANMIEGQLI 607
            P WW+WC +  L YA   M  L ++    LI
Sbjct: 1230 PGWWAWCRDRNLEYALKWMTALLSIFGISLI 1260


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,067,337
Number of Sequences: 27780
Number of extensions: 433977
Number of successful extensions: 1092
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)