Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0059
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    26   0.37 
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    26   0.37 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   3.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.9  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   7.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.9  

>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 446 EQYGNNGCNGGLMDNAFKYIKTTGASTPSRPTPTRELT 559
           E  G+   +GG   NA     T GASTP    P+  L+
Sbjct: 43  ELTGSTNGDGGARSNADSTSHTDGASTPDVRPPSSSLS 80


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 446 EQYGNNGCNGGLMDNAFKYIKTTGASTPSRPTPTRELT 559
           E  G+   +GG   NA     T GASTP    P+  L+
Sbjct: 199 ELTGSTNGDGGARSNADSTSHTDGASTPDVRPPSSSLS 236


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +2

Query: 440 CSEQYGNNGCNGGLMDNAFKYIKTTGAS 523
           C+E+  N+ C GG +     Y +  G++
Sbjct: 319 CNEEERNSHCLGGTITRTMWYFQICGSA 346


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 83  QTQPEVRNGPRFLQAGHEQVRRH 151
           QT P +  GPRF      +  +H
Sbjct: 63  QTHPSIGGGPRFSSGVGRKAWKH 85


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 83  QTQPEVRNGPRFLQAGHEQVRRH 151
           QT P +  GPRF      +  +H
Sbjct: 63  QTHPSIGGGPRFSSGVGRKAWKH 85


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 164 VREDYERLQQNCQTQQESV 220
           +REDY RL + C+   E +
Sbjct: 269 LREDYNRLCRLCKRVDEEI 287


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 164 VREDYERLQQNCQTQQESV 220
           +REDY RL + C+   E +
Sbjct: 269 LREDYNRLCRLCKRVDEEI 287


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 164 VREDYERLQQNCQTQQESV 220
           +REDY RL + C+   E +
Sbjct: 269 LREDYNRLCRLCKRVDEEI 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,641
Number of Sequences: 336
Number of extensions: 3469
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)