Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0052
(786 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 2.4
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 2.4
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 2.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 4.3
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 4.3
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 4.3
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 4.3
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 4.3
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 4.3
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 4.3
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 23 4.3
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 7.4
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 7.4
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 9.8
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.4
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +1
Query: 124 RLMLSERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGISLTVLKRSYHYLLSASYFNN 303
R S R R Q +K+ R R + R +R E ++S + + +S NN
Sbjct: 36 RKRYSRSREREQNSYKNEREYRKYRETSKE-RSRDRKER------EKSKEHKIISSLSNN 88
Query: 304 YQTNREGFAKLF 339
Y N + KL+
Sbjct: 89 YNYNNNNYKKLY 100
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.4
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +1
Query: 124 RLMLSERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGISLTVLKRSYHYLLSASYFNN 303
R S R R Q +K+ R R + R +R E ++S + + +S NN
Sbjct: 36 RKRYSRSREREQNSYKNEREYRKYRETSKE-RSRDRKER------EKSKEHKIISSLSNN 88
Query: 304 YQTNREGFAKLF 339
Y N + KL+
Sbjct: 89 YNYNNNNYKKLY 100
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.4
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +1
Query: 124 RLMLSERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGISLTVLKRSYHYLLSASYFNN 303
R S R R Q +K+ R R + R +R E ++S + + +S NN
Sbjct: 36 RKRYSRSREREQNSYKNEREYRKYRETSKE-RSRDRKER------EKSKEHKIISSLSNN 88
Query: 304 YQTNREGFAKLF 339
Y N + KL+
Sbjct: 89 YNYNNNNYKKLY 100
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.3
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Frame = +1
Query: 136 SERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGIS------LTVLKRSYHYLLSASYF 297
S R R Q +K+ + R + R +RTE ++ L +Y Y +Y
Sbjct: 40 SRSREREQNSYKNEREYQKYRETSKE-RSRDRTERERCKEPKIISSLSNNYKYSNYNNYN 98
Query: 298 NNYQTN 315
NNY TN
Sbjct: 99 NNYNTN 104
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.3
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Frame = +1
Query: 136 SERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGIS------LTVLKRSYHYLLSASYF 297
S R R Q +K+ + R + R +RTE ++ L +Y Y +Y
Sbjct: 40 SRSREREQNSYKNEREYQKYRETSKE-RSRDRTERERCKEPKIISSLSNNYKYSNYNNYN 98
Query: 298 NNYQTN 315
NNY TN
Sbjct: 99 NNYNTN 104
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.3
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Frame = +1
Query: 136 SERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGIS------LTVLKRSYHYLLSASYF 297
S R R Q +K+ + R + R +RTE ++ L +Y Y +Y
Sbjct: 40 SRSREREQNSYKNEREYQKYRETSKE-RSRDRTERERCKEPKIISSLSNNYKYSNYNNYN 98
Query: 298 NNYQTN 315
NNY TN
Sbjct: 99 NNYNTN 104
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.3
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Frame = +1
Query: 136 SERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGIS------LTVLKRSYHYLLSASYF 297
S R R Q +K+ + R + R +RTE ++ L +Y Y +Y
Sbjct: 40 SRSREREQNSYKNEREYQKYRETSKE-RSRDRTERERCKEPKIISSLSNNYKYSNYNNYN 98
Query: 298 NNYQTN 315
NNY TN
Sbjct: 99 NNYNTN 104
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.3
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Frame = +1
Query: 136 SERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGIS------LTVLKRSYHYLLSASYF 297
S R R Q +K+ + R + R +RTE ++ L +Y Y +Y
Sbjct: 40 SRSREREQNSYKNEREYQKYRETSKE-RSRDRTERERCKEPKIISSLSNNYKYSNYNNYN 98
Query: 298 NNYQTN 315
NNY TN
Sbjct: 99 NNYNTN 104
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.3
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Frame = +1
Query: 136 SERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGIS------LTVLKRSYHYLLSASYF 297
S R R Q +K+ + R + R +RTE ++ L +Y Y +Y
Sbjct: 40 SRSREREQNSYKNEREYQKYRETSKE-RSRDRTERERCKEPKIISSLSNNYKYSNYNNYN 98
Query: 298 NNYQTN 315
NNY TN
Sbjct: 99 NNYNTN 104
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.3
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Frame = +1
Query: 136 SERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGIS------LTVLKRSYHYLLSASYF 297
S R R Q +K+ + R + R +RTE ++ L +Y Y +Y
Sbjct: 40 SRSREREQNSYKNEREYQKYRETSKE-RSRDRTERERCKEPKIISSLSNNYKYSNYNNYN 98
Query: 298 NNYQTN 315
NNY TN
Sbjct: 99 NNYNTN 104
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 124 RLMLSERRPRMQTDFKSAAL 183
RL +RR RM+ D+K AL
Sbjct: 407 RLAEQDRRERMEFDWKQVAL 426
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.8 bits (44), Expect = 7.4
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +1
Query: 271 HYLLSASYFNNYQTNREGFAKLFRKLSDDSWEK 369
HYL + S NY + + F K SW K
Sbjct: 576 HYLDAKSSVQNYSLAKHQLKEAFVKAHLGSWVK 608
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.8 bits (44), Expect = 7.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 656 TREATNRIGLLTHEFLLDVLSDLSIVEEVAVFSD 555
+ E+ N GL FL +V+SD + + F D
Sbjct: 802 SEESINNQGLECLRFLNEVISDFDAILDQNKFKD 835
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 21.4 bits (43), Expect = 9.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 282 QEIMVGTFQNSEANAFSSF 226
QEI G F NSE+ F F
Sbjct: 120 QEIFNGYFLNSESKDFIDF 138
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,656
Number of Sequences: 438
Number of extensions: 4037
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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