Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0051
         (704 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095068-1|AAM11396.1|  110|Drosophila melanogaster RE14985p pro...   128   5e-30
AE014296-608|AAF47744.1|  110|Drosophila melanogaster CG17737-PA...   128   5e-30
AY118671-1|AAM50531.1| 1240|Drosophila melanogaster AT03020p pro...    34   0.16 
AY051517-1|AAK92941.1|  731|Drosophila melanogaster GH16956p pro...    33   0.38 
AE013599-2721|AAF57674.2|  731|Drosophila melanogaster CG30115-P...    33   0.38 
AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-P...    33   0.38 

>AY095068-1|AAM11396.1|  110|Drosophila melanogaster RE14985p
           protein.
          Length = 110

 Score =  128 bits (310), Expect = 5e-30
 Identities = 58/66 (87%), Positives = 64/66 (96%)
 Frame = +1

Query: 37  MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRAC 216
           MSIQNLNT DPFADAIK ++DD+QDGLVH+RIQQRNGRKTLTTVQGLS+EYDLKKIVR+C
Sbjct: 1   MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSC 60

Query: 217 KKEFAC 234
           KKEFAC
Sbjct: 61  KKEFAC 66



 Score = 79.8 bits (188), Expect = 3e-15
 Identities = 34/37 (91%), Positives = 35/37 (94%)
 Frame = +2

Query: 254 PEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 364
           PEYGEVLQLQGDQRENICQWLTK GL KP+QLKVHGF
Sbjct: 74  PEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110


>AE014296-608|AAF47744.1|  110|Drosophila melanogaster CG17737-PA
           protein.
          Length = 110

 Score =  128 bits (310), Expect = 5e-30
 Identities = 58/66 (87%), Positives = 64/66 (96%)
 Frame = +1

Query: 37  MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRAC 216
           MSIQNLNT DPFADAIK ++DD+QDGLVH+RIQQRNGRKTLTTVQGLS+EYDLKKIVR+C
Sbjct: 1   MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSC 60

Query: 217 KKEFAC 234
           KKEFAC
Sbjct: 61  KKEFAC 66



 Score = 79.8 bits (188), Expect = 3e-15
 Identities = 34/37 (91%), Positives = 35/37 (94%)
 Frame = +2

Query: 254 PEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 364
           PEYGEVLQLQGDQRENICQWLTK GL KP+QLKVHGF
Sbjct: 74  PEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110


>AY118671-1|AAM50531.1| 1240|Drosophila melanogaster AT03020p
           protein.
          Length = 1240

 Score = 34.3 bits (75), Expect = 0.16
 Identities = 20/79 (25%), Positives = 39/79 (49%)
 Frame = +1

Query: 7   LKQRDPTFNRMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSE 186
           ++QR+  F R ++ N ++FD F ++++  E+ V        +  RN     T +Q L++ 
Sbjct: 580 IRQRNSKFKRKTVANSSSFDSFNESLEQEEESVSQAKPSKPL-ARNNSLDDTALQKLAAA 638

Query: 187 YDLKKIVRACKKEFACKVR 243
              +K   A K+E    V+
Sbjct: 639 MRYRKRDAAVKEEMKTPVK 657


>AY051517-1|AAK92941.1|  731|Drosophila melanogaster GH16956p
           protein.
          Length = 731

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 19/79 (24%), Positives = 39/79 (49%)
 Frame = +1

Query: 7   LKQRDPTFNRMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSE 186
           ++QR+  F R ++ N ++FD F ++++  E+ +        +  RN     T +Q L++ 
Sbjct: 74  IRQRNSKFKRKTVANSSSFDSFNESLEQEEESISQAKPSKPL-ARNNSLDDTALQKLAAA 132

Query: 187 YDLKKIVRACKKEFACKVR 243
              +K   A K+E    V+
Sbjct: 133 MRYRKRDAAVKEETKTPVK 151


>AE013599-2721|AAF57674.2|  731|Drosophila melanogaster CG30115-PC,
           isoform C protein.
          Length = 731

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 19/79 (24%), Positives = 39/79 (49%)
 Frame = +1

Query: 7   LKQRDPTFNRMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSE 186
           ++QR+  F R ++ N ++FD F ++++  E+ +        +  RN     T +Q L++ 
Sbjct: 74  IRQRNSKFKRKTVANSSSFDSFNESLEQEEESISQAKPSKPL-ARNNSLDDTALQKLAAA 132

Query: 187 YDLKKIVRACKKEFACKVR 243
              +K   A K+E    V+
Sbjct: 133 MRYRKRDAAVKEETKTPVK 151


>AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-PD,
            isoform D protein.
          Length = 1593

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 19/79 (24%), Positives = 39/79 (49%)
 Frame = +1

Query: 7    LKQRDPTFNRMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSE 186
            ++QR+  F R ++ N ++FD F ++++  E+ +        +  RN     T +Q L++ 
Sbjct: 936  IRQRNSKFKRKTVANSSSFDSFNESLEQEEESISQAKPSKPL-ARNNSLDDTALQKLAAA 994

Query: 187  YDLKKIVRACKKEFACKVR 243
               +K   A K+E    V+
Sbjct: 995  MRYRKRDAAVKEETKTPVK 1013


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,389,890
Number of Sequences: 53049
Number of extensions: 663847
Number of successful extensions: 1684
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1684
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)