Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0051
         (704 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58762-4|AAK39303.1|  109|Caenorhabditis elegans Hypothetical pr...    75   7e-14
Z79600-6|CAB01879.2|  529|Caenorhabditis elegans Hypothetical pr...    32   0.46 
L16621-11|AAA28226.2|  192|Caenorhabditis elegans Hypothetical p...    29   2.4  
Z68004-2|CAA91982.1|  677|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U97407-9|AAL02457.2| 1768|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p...    28   7.5  
Z50740-2|CAA90608.1|  383|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>U58762-4|AAK39303.1|  109|Caenorhabditis elegans Hypothetical
           protein T27F7.3b protein.
          Length = 109

 Score = 74.5 bits (175), Expect = 7e-14
 Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
 Frame = +1

Query: 37  MSIQNLNTFDPFADAIKS--SEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVR 210
           MSI NLN   P ADA +   +ED V+ G+ H+RIQQR GRKT+TTVQG+ +EYDLK+IV+
Sbjct: 1   MSIANLNR--P-ADAFEQLETEDGVRQGVCHIRIQQRTGRKTITTVQGIGTEYDLKRIVQ 57

Query: 211 ACKKEFAC 234
             KK+ +C
Sbjct: 58  YLKKKHSC 65



 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 20/37 (54%), Positives = 26/37 (70%)
 Frame = +2

Query: 254 PEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 364
           PEYGEV+QL GDQR+ +  +L K G+V     +VHGF
Sbjct: 73  PEYGEVIQLTGDQRDKVKDFLIKVGIVNESNCRVHGF 109


>Z79600-6|CAB01879.2|  529|Caenorhabditis elegans Hypothetical
           protein F59C6.8 protein.
          Length = 529

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +1

Query: 22  PTFNRMSIQNLNTFDPF-ADAIKSSEDDVQDGL-VHVRIQQRNGRKTLTTV 168
           PTFNR  I N   FDP+  +A K +   + DGL +  + + R  + T+ T+
Sbjct: 397 PTFNRSKISNPPFFDPYHLNATKRAIYKISDGLKIQRKFKNRVSQGTMKTI 447


>L16621-11|AAA28226.2|  192|Caenorhabditis elegans Hypothetical
           protein ZK688.1 protein.
          Length = 192

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +3

Query: 432 IINPIKNMYLESTDVYREKRTRLSAPVPCDFLCCIKYCKSYILSPPSRLISCKII 596
           ++NP  +     TD  + +   LS P     L   + C S  +SPP    SCK +
Sbjct: 84  VVNPPVSPIQPKTDPEQSENDCLSCPSLIPILDSCENCVSVKISPPFEYYSCKAV 138


>Z68004-2|CAA91982.1|  677|Caenorhabditis elegans Hypothetical
           protein F47B10.2 protein.
          Length = 677

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -2

Query: 367 LETVHLELFRLH*AGFGEPLA--NILSLVALKLQHLA 263
           L+ + L L R H  G+GEPLA      L+AL++  LA
Sbjct: 199 LKKLQLNLIRSHATGYGEPLAPNRARMLLALRINILA 235


>U97407-9|AAL02457.2| 1768|Caenorhabditis elegans Hypothetical protein
            C34G6.1 protein.
          Length = 1768

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 236  LHANSFLHARTIFFRSYSEERPCTVVSVLRPFRCWIRTWTKP 111
            L  +SF+ A T+F RS  E+RP  V  + +    +  + ++P
Sbjct: 1417 LDKDSFIQAITVFIRSLVEQRPAWVSPLAKTMEEYANSESEP 1458


>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
            protein T08A9.1 protein.
          Length = 1330

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -2

Query: 322  FGEPLANILSLVALKLQHLAVLRCSTTVPCTRTPSCMPA 206
            F +P+A     VA     L V R S    CT+T  C+PA
Sbjct: 1182 FYQPMAASTIQVATSPSELEVERSSQNTICTQTRLCLPA 1220


>Z50740-2|CAA90608.1|  383|Caenorhabditis elegans Hypothetical
           protein F31B12.3 protein.
          Length = 383

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +3

Query: 624 NSLFLFLYDIV---FLNCCNNSINKLTCFC 704
           ++ F+F Y  +   F  CC N +++ TC+C
Sbjct: 62  SNFFVFDYWTIEDNFETCCRNQLSQFTCYC 91


>U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical
           protein R03G5.3 protein.
          Length = 1311

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 540 YCKSYILSPPSRLISCKIINRTK**IYLNSLFLFLYDIVFLNC 668
           YC   +L   S  I  K++N TK     +S   + YD++ L C
Sbjct: 172 YCGINVLETNSNFIKFKVLNGTKIFCSTSSPKAYFYDLMPLGC 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,134,734
Number of Sequences: 27780
Number of extensions: 337256
Number of successful extensions: 917
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)