Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0051
         (704 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    23   2.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.8  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   3.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.9  

>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = -2

Query: 679 ELLQQFKNTMSYKNKNKLFRYIHYFVRLI 593
           +++    N  +Y N N  ++ +HY +  I
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPLHYNINYI 341


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 393  PHSTLYYERLRVVIINPIKNMYLESTDVYREKRTRLSA 506
            PHSTL Y+     ++ P K    +S D  +E  T  +A
Sbjct: 1072 PHSTLEYKVKERHLMRPRKRDQKQSDDKTKETSTVTAA 1109


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 90  AFDSIGEWVECVEILDGHTIER 25
           A  SI E+    E+L  HT+E+
Sbjct: 259 AMSSIAEFSVSTEVLQDHTLEK 280


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -3

Query: 525 GSRKAQARTTVFSFL-CRRRCSLN 457
           GSR A   TTV+ F+  R+R SL+
Sbjct: 297 GSRAAATTTTVYQFIEERQRISLS 320


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -3

Query: 525 GSRKAQARTTVFSFL-CRRRCSLN 457
           GSR A   TTV+ F+  R+R SL+
Sbjct: 297 GSRAAATTTTVYQFIEERQRISLS 320


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -3

Query: 525 GSRKAQARTTVFSFL-CRRRCSLN 457
           GSR A   TTV+ F+  R+R SL+
Sbjct: 297 GSRAAATTTTVYQFIEERQRISLS 320


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,959
Number of Sequences: 438
Number of extensions: 4450
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)