Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0050
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q96376 Cluster: S-linalool synthase; n=5; Onagraceae|Re...    34   4.0  
UniRef50_Q2R0A7 Cluster: Transposon protein, putative, CACTA, En...    33   5.3  
UniRef50_A5DP57 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  

>UniRef50_Q96376 Cluster: S-linalool synthase; n=5; Onagraceae|Rep:
           S-linalool synthase - Clarkia breweri
          Length = 870

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -2

Query: 525 KQSPKSATNFCKDFYDEEISFFLLHTSGRAHSPSGVMWLLDN 400
           K SPKS  +   + Y + ++F+LL  +    SPS   W LD+
Sbjct: 314 KASPKSLYSIAAELYRDSLAFWLLRVNNHWVSPSIFCWFLDD 355


>UniRef50_Q2R0A7 Cluster: Transposon protein, putative, CACTA,
           En/Spm sub-class; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Transposon protein, putative,
           CACTA, En/Spm sub-class - Oryza sativa subsp. japonica
           (Rice)
          Length = 414

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
 Frame = +3

Query: 429 GCERVHSYAIKKN*FLH-----RRSLYKNSLRIWDSACRVASILIQRAPYLYLTSGFSDA 593
           GC+R ++  I  + FL       + ++K+ LR+WD  CR    L  RA      +     
Sbjct: 164 GCDRDYTPGIDIDVFLEPLMEDMKEMWKDGLRVWDEYCRKHFTL--RAIIFVTINDLPAN 221

Query: 594 YGLR*QLNARYRELIYLDSAINKYVLSS 677
           + L  QL  ++  LI +++   KY+ +S
Sbjct: 222 FSLSGQLEGKFGCLICINNTSYKYLTAS 249


>UniRef50_A5DP57 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 634

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -3

Query: 506 QRIFVKTSTMKKLVFFYCIRVDALTAHLVLCG 411
           +R  +  ST K ++F  C+ +DALT+  +LCG
Sbjct: 16  KRTSLSHSTTKLILFVLCLNIDALTSAKILCG 47


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,488,298
Number of Sequences: 1657284
Number of extensions: 12109907
Number of successful extensions: 23512
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23510
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)