Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0050
         (718 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2066|AAM70973.1|  599|Drosophila melanogaster CG30468-P...    29   4.8  
AF247761-1|AAF74192.1| 1671|Drosophila melanogaster kinesin supe...    29   6.3  
AE013599-2336|AAM70884.1| 1670|Drosophila melanogaster CG8566-PD...    29   6.3  

>AE013599-2066|AAM70973.1|  599|Drosophila melanogaster CG30468-PA
           protein.
          Length = 599

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 11/46 (23%), Positives = 23/46 (50%)
 Frame = +2

Query: 503 VADLGLCLSRRIDTNTARALSLPYIWIF*CLWTPITTKRQISRAHL 640
           + D+G+C +R ++ +   A+S PY+    C   P+      S  ++
Sbjct: 255 ILDIGICEARTLEMSNYDAISYPYLMSSYCFMAPLPDSLPFSDVYM 300


>AF247761-1|AAF74192.1| 1671|Drosophila melanogaster kinesin
            superfamily member DUnc104 protein.
          Length = 1671

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 314  FRFEG-WGSRCNYTQTLKLISQGG*RIYVVLSS 409
            +RFE  W S  + +  L  +SQGG  IY+ LS+
Sbjct: 1221 YRFEAAWDSSLHNSALLNRVSQGGETIYITLSA 1253


>AE013599-2336|AAM70884.1| 1670|Drosophila melanogaster CG8566-PD
            protein.
          Length = 1670

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 314  FRFEG-WGSRCNYTQTLKLISQGG*RIYVVLSS 409
            +RFE  W S  + +  L  +SQGG  IY+ LS+
Sbjct: 1220 YRFEAAWDSSLHNSALLNRVSQGGETIYITLSA 1252


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,661,224
Number of Sequences: 53049
Number of extensions: 568894
Number of successful extensions: 917
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)