Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0049
         (746 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   133   1e-31
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    31   0.87 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    30   1.5  
AF038612-1|AAB92043.1|  348|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AF016416-8|AAB65271.1|  388|Caenorhabditis elegans Hypothetical ...    28   6.1  
AC024776-19|AAK68480.2|  398|Caenorhabditis elegans Hypothetical...    28   6.1  
Z75544-2|CAC42316.1|  480|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  133 bits (322), Expect = 1e-31
 Identities = 56/78 (71%), Positives = 66/78 (84%)
 Frame = +1

Query: 511 MVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHP 690
           +VI+S ILERDE+  D++WNTAVVIS TG VIG+ RKNHIPRVGDFNES YYME   GHP
Sbjct: 162 IVIISPILERDEEKDDVIWNTAVVISHTGRVIGRSRKNHIPRVGDFNESTYYMESTLGHP 221

Query: 691 VFATRYGKIAVNICFGRH 744
           VF T+YG+I +NIC+GRH
Sbjct: 222 VFETKYGRIGINICYGRH 239



 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 45/90 (50%), Positives = 56/90 (62%)
 Frame = +2

Query: 239 PENCEVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFC 418
           P    V  +Q+ I  PT   V EQ+ AI  +V  +I+ A   G N+I  QE W MPFAFC
Sbjct: 71  PRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPFAFC 130

Query: 419 TREKQPWCEFAESAEDGPTTTFLRELAIKY 508
           TRE+ PW EFAES   GPTT FL +LA+K+
Sbjct: 131 TRERLPWTEFAESVYTGPTTQFLSKLAVKH 160


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 478 DLPSGTRHQVPMVIVSSILERDEKHSDILWNTAV--VISDTGNVIGKHR 618
           DLP+G   +   +++  I+E  E  +  LWN  +  ++SD  +  GK R
Sbjct: 211 DLPTGLMQKSTNIVLGGIVECSENPTTTLWNALIPFILSDVESHTGKVR 259


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 478 DLPSGTRHQVPMVIVSSILERDEKHSDILWNTAV--VISDTGNVIGKHR 618
           DLP+G   +   +++  I+E  E  +  LWN  +  ++SD  +  GK R
Sbjct: 283 DLPTGLMQKSTNIVLGGIVECSENPTTTLWNALIPFILSDVESHSGKVR 331


>Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical
           protein C37A5.1 protein.
          Length = 512

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 617 RCFPITFPVSLITTAVFQSMSECFSSLSNIEDT-ITIGT*WRVPEGRSWSARLQLIR 450
           +C P+TF ++   T +       F+++  IE+T I I T  +  EG    A+  +IR
Sbjct: 75  KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENTAIAIATLVKGTEGDVLLAKRTIIR 131


>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
           protein Y53C10A.10 protein.
          Length = 1582

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +2

Query: 605 SGNIARTTFRESAILTNPTTTWKVTPAILYLRPDTARSR*TSASDGT 745
           S ++  TT R S+ L   T+T  VT +I    P+T  S  T  S+GT
Sbjct: 572 STSVFNTTARSSS-LPGSTSTMSVTTSIASTSPETTSSTVTGTSEGT 617


>AF038612-1|AAB92043.1|  348|Caenorhabditis elegans Hypothetical
           protein F13B6.1 protein.
          Length = 348

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 18/68 (26%), Positives = 36/68 (52%)
 Frame = -3

Query: 666 VVVGFVKIADSRNVVLAMFPDHVSGVTNYNRSVPKYVRMLLVPF*YRGHDHHWYLMASSR 487
           V+ GFV + DS+++V     D + G+TNY++     + M +  F     D  + +  ++R
Sbjct: 156 VLNGFVGLPDSKDMVQFFDSDSIEGLTNYDQ---LELPMDMFHFTSNSADIKYEITYAAR 212

Query: 486 RKVVVGPS 463
           + + +G S
Sbjct: 213 KGITIGSS 220


>Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical
           protein C34E7.3 protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -3

Query: 492 SRRKVVVGPSSADSANSHHGCFSLVQNAKGMFHNSWKQMMLTPSWPATS 346
           SR K+    +S+   +  HG + +V+ AK  F + +++  +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245


>Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical
           protein T21C9.3b protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 314 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 448
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical
           protein T21C9.3a protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 314 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 448
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>AF016416-8|AAB65271.1|  388|Caenorhabditis elegans Hypothetical
           protein F29A7.1 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +1

Query: 565 WNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYM 669
           WN  + + D   ++   +  H+ R GD+   NY++
Sbjct: 266 WNKKIAMKDVPFIVYSPQFEHVIRGGDWENENYFL 300


>AC024776-19|AAK68480.2|  398|Caenorhabditis elegans Hypothetical
           protein Y41D4B.6 protein.
          Length = 398

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +1

Query: 481 LPSGTRHQVPMVIVSSILERDEKHSDILWNT-AVVISDTGNVIGKHRKNHIPRV 639
           +P+GT  QVP   VS   +  E +SD L N+ + +IS   N I   R + IP +
Sbjct: 181 VPTGTPRQVPKE-VSKETKSKESNSDALGNSISRLISSLKNFISGGRSSIIPGI 233


>Z75544-2|CAC42316.1|  480|Caenorhabditis elegans Hypothetical
           protein K02A11.1b protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +2

Query: 341 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 496
           I+ +  Q G N++      NMP+  C  E+      +E A  G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189


>Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical
           protein K02A11.1a protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +2

Query: 341 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 496
           I+ +  Q G N++      NMP+  C  E+      +E A  G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,971,628
Number of Sequences: 27780
Number of extensions: 395335
Number of successful extensions: 1210
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)