Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0046
(635 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46691-1|AAC50821.1| 1603|Homo sapiens putative chromatin struct... 30 6.0
D79984-1|BAA11479.2| 1730|Homo sapiens KIAA0162 protein. 30 6.0
BC150268-1|AAI50269.1| 1726|Homo sapiens suppressor of Ty 6 homo... 30 6.0
BC073963-1|AAH73963.1| 545|Homo sapiens SUPT6H protein protein. 30 6.0
BC033074-1|AAH33074.1| 603|Homo sapiens SUPT6H protein protein. 30 6.0
BC003696-1|AAH03696.1| 1076|Homo sapiens SUPT6H protein protein. 30 6.0
BC003692-1|AAH03692.1| 448|Homo sapiens Similar to suppressor o... 30 6.0
AK096804-1|BAC04866.1| 212|Homo sapiens protein ( Homo sapiens ... 30 6.0
AF070532-1|AAC28631.1| 267|Homo sapiens emb-5 protein. 30 6.0
AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein prot... 30 7.9
>U46691-1|AAC50821.1| 1603|Homo sapiens putative chromatin structure
regulator protein.
Length = 1603
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -3
Query: 513 ASTDPRRFRIFRDYSSTDATFXXXXXXXRHSLVLWGNRHARPMRAREAIQHDRGLRWTPT 334
AST P+ + SS+ H+ + WG + ++ +EA + + R TP
Sbjct: 1517 ASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQWLQEKEAERRKQKQRLTPR 1576
Query: 333 TIPR*RVETTSLNLTG 286
P +E+T +++ G
Sbjct: 1577 PSPSPMIESTPMSIAG 1592
>D79984-1|BAA11479.2| 1730|Homo sapiens KIAA0162 protein.
Length = 1730
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -3
Query: 513 ASTDPRRFRIFRDYSSTDATFXXXXXXXRHSLVLWGNRHARPMRAREAIQHDRGLRWTPT 334
AST P+ + SS+ H+ + WG + ++ +EA + + R TP
Sbjct: 1644 ASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQWLQEKEAERRKQKQRLTPR 1703
Query: 333 TIPR*RVETTSLNLTG 286
P +E+T +++ G
Sbjct: 1704 PSPSPMIESTPMSIAG 1719
>BC150268-1|AAI50269.1| 1726|Homo sapiens suppressor of Ty 6 homolog
(S. cerevisiae) protein.
Length = 1726
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -3
Query: 513 ASTDPRRFRIFRDYSSTDATFXXXXXXXRHSLVLWGNRHARPMRAREAIQHDRGLRWTPT 334
AST P+ + SS+ H+ + WG + ++ +EA + + R TP
Sbjct: 1640 ASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQWLQEKEAERRKQKQRLTPR 1699
Query: 333 TIPR*RVETTSLNLTG 286
P +E+T +++ G
Sbjct: 1700 PSPSPMIESTPMSIAG 1715
>BC073963-1|AAH73963.1| 545|Homo sapiens SUPT6H protein protein.
Length = 545
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -3
Query: 513 ASTDPRRFRIFRDYSSTDATFXXXXXXXRHSLVLWGNRHARPMRAREAIQHDRGLRWTPT 334
AST P+ + SS+ H+ + WG + ++ +EA + + R TP
Sbjct: 459 ASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQWLQEKEAERRKQKQRLTPR 518
Query: 333 TIPR*RVETTSLNLTG 286
P +E+T +++ G
Sbjct: 519 PSPSPMIESTPMSIAG 534
>BC033074-1|AAH33074.1| 603|Homo sapiens SUPT6H protein protein.
Length = 603
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -3
Query: 513 ASTDPRRFRIFRDYSSTDATFXXXXXXXRHSLVLWGNRHARPMRAREAIQHDRGLRWTPT 334
AST P+ + SS+ H+ + WG + ++ +EA + + R TP
Sbjct: 517 ASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQWLQEKEAERRKQKQRLTPR 576
Query: 333 TIPR*RVETTSLNLTG 286
P +E+T +++ G
Sbjct: 577 PSPSPMIESTPMSIAG 592
>BC003696-1|AAH03696.1| 1076|Homo sapiens SUPT6H protein protein.
Length = 1076
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -3
Query: 513 ASTDPRRFRIFRDYSSTDATFXXXXXXXRHSLVLWGNRHARPMRAREAIQHDRGLRWTPT 334
AST P+ + SS+ H+ + WG + ++ +EA + + R TP
Sbjct: 990 ASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQWLQEKEAERRKQKQRLTPR 1049
Query: 333 TIPR*RVETTSLNLTG 286
P +E+T +++ G
Sbjct: 1050 PSPSPMIESTPMSIAG 1065
>BC003692-1|AAH03692.1| 448|Homo sapiens Similar to suppressor of
Ty (S.cerevisiae) 6 homolog protein.
Length = 448
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -3
Query: 513 ASTDPRRFRIFRDYSSTDATFXXXXXXXRHSLVLWGNRHARPMRAREAIQHDRGLRWTPT 334
AST P+ + SS+ H+ + WG + ++ +EA + + R TP
Sbjct: 362 ASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQWLQEKEAERRKQKQRLTPR 421
Query: 333 TIPR*RVETTSLNLTG 286
P +E+T +++ G
Sbjct: 422 PSPSPMIESTPMSIAG 437
>AK096804-1|BAC04866.1| 212|Homo sapiens protein ( Homo sapiens
cDNA FLJ39485 fis, clone PROST2015124. ).
Length = 212
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 343 PSKPTVVLNRLPRAHRPGVPVSPQNQTMTTTASTAAECGISGA 471
P KP R P H PG P P+ + A++A G SGA
Sbjct: 3 PRKPGTAERRRPSRHLPGSPWRPRWACSVSWAASALGVGSSGA 45
>AF070532-1|AAC28631.1| 267|Homo sapiens emb-5 protein.
Length = 267
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -3
Query: 513 ASTDPRRFRIFRDYSSTDATFXXXXXXXRHSLVLWGNRHARPMRAREAIQHDRGLRWTPT 334
AST P+ + SS+ H+ + WG + ++ +EA + + R TP
Sbjct: 181 ASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQWLQEKEAERRKQKQRLTPR 240
Query: 333 TIPR*RVETTSLNLTG 286
P +E+T +++ G
Sbjct: 241 PSPSPMIESTPMSIAG 256
>AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein
protein.
Length = 1569
Score = 29.9 bits (64), Expect = 7.9
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -1
Query: 419 WFCGETGTPGRCA-RGRRFNTTVGFDGRQQRYH 324
W C E PG C+ G F TT FD R R+H
Sbjct: 385 WVCTERPCPGHCSLEGGSFVTT--FDARPYRFH 415
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,257,404
Number of Sequences: 237096
Number of extensions: 1796514
Number of successful extensions: 4609
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4609
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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