Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0044
(481 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 128 4e-31
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 120 9e-29
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 103 1e-23
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 100 1e-22
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 73 2e-14
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 51 8e-08
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 6e-05
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.16
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 29 0.48
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.48
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 0.84
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 1.9
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 3.4
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 26 3.4
SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|... 25 5.9
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 25 5.9
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 5.9
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 25 7.8
SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|ch... 25 7.8
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 7.8
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 7.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 128 bits (309), Expect = 4e-31
Identities = 57/77 (74%), Positives = 66/77 (85%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEVSSM 429
PHNTIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE +TF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSM 120
Query: 430 VLTKMKETAEAYLGKTV 480
VL KM+ETAEAYLG V
Sbjct: 121 VLMKMRETAEAYLGGKV 137
Score = 112 bits (269), Expect = 3e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 120 bits (290), Expect = 9e-29
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEVSSM 429
PHNTIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE +TF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSM 120
Query: 430 VLTKMKETAEAYLGKTV 480
VL KM+E+AEA+LG V
Sbjct: 121 VLLKMRESAEAFLGGKV 137
Score = 112 bits (269), Expect = 3e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 103 bits (248), Expect = 1e-23
Identities = 46/77 (59%), Positives = 58/77 (75%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEVSSM 429
P NT+FDAKRLIGR++ED Q D+KHWPF+V+ + G P IEV Y GE + F +E+S+M
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124
Query: 430 VLTKMKETAEAYLGKTV 480
VLTKMKE +EA L K V
Sbjct: 125 VLTKMKEISEAKLNKRV 141
Score = 100 bits (239), Expect = 1e-22
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 100 bits (240), Expect = 1e-22
Identities = 44/77 (57%), Positives = 60/77 (77%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEVSSM 429
P NTIFD KRLIGRKF++ T+ D+K +PF +V+D +P +EV G+ + F PEE+S+M
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 430 VLTKMKETAEAYLGKTV 480
+L+KMK+TAEAYLGK V
Sbjct: 154 ILSKMKQTAEAYLGKPV 170
Score = 98.3 bits (234), Expect = 5e-22
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNP 94
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 73.3 bits (172), Expect = 2e-14
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 247
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 248 NPTTQY 265
NP +
Sbjct: 109 NPENTF 114
Score = 66.1 bits (154), Expect = 3e-12
Identities = 30/77 (38%), Positives = 46/77 (59%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEVSSM 429
P NT F KRLIGR+F++ VQ D+K P+++V + + +T+ P ++
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNG---DAWLEARGKTYSPSQIGGF 166
Query: 430 VLTKMKETAEAYLGKTV 480
+L+KM+ETA YLGK V
Sbjct: 167 ILSKMRETASTYLGKDV 183
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 51.2 bits (117), Expect = 8e-08
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +2
Query: 68 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 247
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 248 N 250
N
Sbjct: 63 N 63
Score = 31.1 bits (67), Expect = 0.090
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEVSSMV 432
NT+ KRL GR ++D ++ + ++ G +V Y E+ F ++ +
Sbjct: 66 NTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAY 125
Query: 433 LTKMKETAEAYL 468
TK+K AEA L
Sbjct: 126 FTKIKAIAEAEL 137
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.5 bits (93), Expect = 6e-05
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 250
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 30.3 bits (65), Expect = 0.16
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTT 259
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPA- 83
Query: 260 QYSMPNV 280
+S+ NV
Sbjct: 84 -HSIRNV 89
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 28.7 bits (61), Expect = 0.48
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 179 PSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLC 313
P +A T ER++ AAK A+N T Y++ ++ D K++ C
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.48
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 75 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 170
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 0.84
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = -3
Query: 449 SFIFVSTMELTSSGKKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLA 270
S + S+ +TSS S+P+ ++S+L +T+S G + T +SS L +
Sbjct: 903 STVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTGLNTSTPIT-SSSVLNSSTPIT 961
Query: 269 SNIVLWGSSP 240
S+ VL S+P
Sbjct: 962 SSTVLNSSTP 971
Score = 25.8 bits (54), Expect = 3.4
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = -3
Query: 449 SFIFVSTMELTSSGKKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLA 270
S + S+ +TSS S+P+ ++S+L ++T+S + T +SS L +
Sbjct: 3291 STVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSTALNTSTPIT-SSSVLNSSTAIT 3349
Query: 269 SNIVLWGSSP 240
S+ +L S+P
Sbjct: 3350 SSSILNSSTP 3359
Score = 25.4 bits (53), Expect = 4.5
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = -3
Query: 449 SFIFVSTMELTSSGKKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLA 270
S + S+ +TSS S+P+ ++S+L +T+S + T +SS L +
Sbjct: 1575 SSVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPIT-SSSVLNSSTPIT 1633
Query: 269 SNIVLWGSSP 240
S+ VL S+P
Sbjct: 1634 SSTVLNSSTP 1643
Score = 25.4 bits (53), Expect = 4.5
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = -3
Query: 449 SFIFVSTMELTSSGKKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLA 270
S + S+ +TSS S+P+ ++S+L +T+S + T +SS L +
Sbjct: 1839 STVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPIT-SSSVLNSSTPIT 1897
Query: 269 SNIVLWGSSP 240
S+ VL S+P
Sbjct: 1898 SSTVLNSSTP 1907
Score = 25.4 bits (53), Expect = 4.5
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = -3
Query: 449 SFIFVSTMELTSSGKKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLA 270
S + S+ +TSS S+P+ ++S+L +T+S + T +SS L +
Sbjct: 2031 STVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPIT-SSSVLNSSTPIT 2089
Query: 269 SNIVLWGSSP 240
S+ VL S+P
Sbjct: 2090 SSTVLNSSTP 2099
Score = 25.0 bits (52), Expect = 5.9
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = -3
Query: 434 STMELTSSGKKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLASNIVL 255
S+ +TSS S+P+ ++SIL +T+S S +SS L + S+ VL
Sbjct: 380 SSTPITSSSVLNSSTPITSSSILNTSTPITSS-SVLNSSTPITSSSILNSSTPITSSTVL 438
Query: 254 WGSSP 240
S+P
Sbjct: 439 NSSTP 443
Score = 25.0 bits (52), Expect = 5.9
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = -3
Query: 449 SFIFVSTMELTSSGKKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLA 270
S + S+ +TSS S+P+ ++S+L ++T+S + T +SS L +
Sbjct: 987 SSVLNSSTPITSSSVLNTSTPITSSSVLNSSTAITSSTALNTSTPIT-SSSVLNSSTPIT 1045
Query: 269 SNIVLWGSSP 240
S+ V+ S+P
Sbjct: 1046 SSTVVNTSTP 1055
Score = 25.0 bits (52), Expect = 5.9
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = -3
Query: 449 SFIFVSTMELTSSGKKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLA 270
S + S+ +TSS S+P+ ++S+L ++T+S S +SS L +
Sbjct: 3063 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSS-SIVNSSTPITSSSVLNSSTAIT 3121
Query: 269 SNIVLWGSSP 240
S+ +L S+P
Sbjct: 3122 SSSILNSSTP 3131
Score = 25.0 bits (52), Expect = 5.9
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -3
Query: 449 SFIFVSTMELTSSGKKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSN-LRPMRRL 273
S + S+ +TSS S+P+ ++S+L ++T+S S+ V SS+ L +
Sbjct: 3315 SSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSS--SILNSSTPVTSSSVLNSSTPI 3372
Query: 272 ASNIVLWGSSP 240
S+ V+ S+P
Sbjct: 3373 TSSTVVNSSTP 3383
Score = 24.6 bits (51), Expect = 7.8
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = -3
Query: 449 SFIFVSTMELTSSGKKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLA 270
S + S+ +TSS S+P+ ++S+L +T+S S +SS L +
Sbjct: 2379 SSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSST-VVNTSTSITSSSVLNSSTPIT 2437
Query: 269 SNIVLWGSSP 240
S+ VL S+P
Sbjct: 2438 SSSVLNSSTP 2447
Score = 24.6 bits (51), Expect = 7.8
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = -3
Query: 449 SFIFVSTMELTSSGKKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLA 270
S + S+ +TSS S+P+ ++S+L +T+S ++ T +SS L +
Sbjct: 2835 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSIT-SSSVLNSSTPIT 2893
Query: 269 SNIVLWGSSP 240
S+ V+ S+P
Sbjct: 2894 SSTVVNTSTP 2903
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 1.9
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 108 TLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRTRWR*TPQHNI 266
T +L S+STG+ T++ T L + PS S+ P T + TP +NI
Sbjct: 282 TSSLTSNSTGK-----TSKTTDLLIAASKKSLPSNSTPSKPNTSFFETPHNNI 329
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 3.4
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -3
Query: 161 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 3
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.8 bits (54), Expect = 3.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 224 AAKNQVAMNPTTQYSMPNVSSDVSSKML 307
A K Q+ +NP + +PNV D + +L
Sbjct: 323 ARKRQIQLNPFPPWDVPNVLEDQMNSLL 350
>SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 330
Score = 25.0 bits (52), Expect = 5.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 390 TLICYLDLRFASITDNLERPVLHVGLHSSIFELTSDETFGI 268
T I L + S+TDN+ER + +G + I +TS F +
Sbjct: 142 TNIALLLATYPSVTDNIER-FIFMGGSTGIGNITSQAEFNV 181
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 25.0 bits (52), Expect = 5.9
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -3
Query: 350 LTTSKGQCFMSACTVASSNLRPMRRLASNIVLWGSSPPGSWRHL 219
L S+ + ++S V +RP + + +IV+ GS++H+
Sbjct: 1173 LNASQAEAYLSKMQVGDLVIRPSSKGSDHIVVTWKVAEGSYQHI 1216
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 5.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 61 QNGKSTRSRNRSGYHVLLRWCLPARE 138
+NGK T +R +S + W P++E
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE 502
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 24.6 bits (51), Expect = 7.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 360 ASITDNLERPVLHVGLHSS 304
A + NL RP+ H LHSS
Sbjct: 408 APVIRNLPRPIYHQDLHSS 426
>SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 530
Score = 24.6 bits (51), Expect = 7.8
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +1
Query: 367 KIEVAYKGEDRTFFPEEVSSMVLTKMKETA 456
KI++++KG+ RT +PE + + +E +
Sbjct: 115 KIQLSFKGKSRTEWPEGIPPKLFDTYEENS 144
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 7.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 86 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 172
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 24.6 bits (51), Expect = 7.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 191 AFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDV 292
AF D + G AK A P+T+ + N+S V
Sbjct: 155 AFYDASQTFGSTAKVAPAPAPSTKTPLANISKPV 188
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,166,047
Number of Sequences: 5004
Number of extensions: 46863
Number of successful extensions: 250
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 184020746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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