Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0044
(481 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 1e-31
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 132 2e-31
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 127 5e-30
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 103 6e-23
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 65 2e-11
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 3e-04
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 40 0.001
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.49
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 1.5
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 2.6
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 29 2.6
SB_6045| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 4.6
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 4.6
SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38) 27 6.1
SB_49479| Best HMM Match : R3H (HMM E-Value=0.0079) 27 8.0
SB_31018| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 132 bits (319), Expect = 1e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 245 MNPT 256
MNPT
Sbjct: 61 MNPT 64
Score = 98.7 bits (235), Expect = 2e-21
Identities = 55/99 (55%), Positives = 64/99 (64%), Gaps = 25/99 (25%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEV--- 420
P NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK++V YKGE +TFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 421 ----------------------SSMVLTKMKETAEAYLG 471
SSMVL KMKETAEAYLG
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLG 161
Score = 36.7 bits (81), Expect = 0.010
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 415 EVSSMVLTKMKETAEAYLG 471
++SSMVL KMKETAEAYLG
Sbjct: 211 QISSMVLNKMKETAEAYLG 229
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 132 bits (318), Expect = 2e-31
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 245 MNP 253
MNP
Sbjct: 61 MNP 63
Score = 124 bits (299), Expect = 4e-29
Identities = 54/77 (70%), Positives = 64/77 (83%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEVSSM 429
P NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE ++FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 430 VLTKMKETAEAYLGKTV 480
VLTKMKETAEAYLG V
Sbjct: 123 VLTKMKETAEAYLGAKV 139
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 127 bits (306), Expect = 5e-30
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 245 MNP 253
+NP
Sbjct: 61 LNP 63
Score = 125 bits (301), Expect = 2e-29
Identities = 56/77 (72%), Positives = 67/77 (87%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEVSSM 429
P NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE +TF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 430 VLTKMKETAEAYLGKTV 480
VL KMKETAEAYLG+ V
Sbjct: 123 VLGKMKETAEAYLGQKV 139
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 103 bits (248), Expect = 6e-23
Identities = 48/77 (62%), Positives = 60/77 (77%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEVSSM 429
P NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E +TF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 430 VLTKMKETAEAYLGKTV 480
VLTKMKETAEAYLGK V
Sbjct: 821 VLTKMKETAEAYLGKKV 837
Score = 99 bits (238), Expect = 9e-22
Identities = 46/58 (79%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP 253
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 245 MNP 253
+NP
Sbjct: 90 INP 92
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIEVAYKGEDRTFFPEEVSS 426
P NTI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 427 MVLTKMKETAEAYLGKTV 480
V+ K++ AE L TV
Sbjct: 152 YVIKKLRTMAERNLTTTV 169
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 62.9 bits (146), Expect = 1e-10
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIEVAYKGEDRTFFPEEVSSMV 432
NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ F PE+V +M+
Sbjct: 121 NTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAML 180
Query: 433 LTKMKETAEAYL 468
T++K TAE L
Sbjct: 181 FTRLKTTAEIAL 192
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 238
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 134 GKVEIIANDQGNRTTPSYVAFTDTERLI 217
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +1
Query: 370 IEVAYKGEDRTFFPEEVSSMVLTKMKETAEAYLGKTV 480
I V GE R+F PE++S++VL ++K AEA+LG+ V
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAV 38
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.49
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 143 EIIANDQGNRTTPSYVAFT-DTERL 214
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.5 bits (63), Expect = 1.5
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 52 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 228
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 229 QEPGGDEPHNTIFDA 273
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 458 SAVSFIFVSTMELTSSGKKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSNLRPMR 279
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 278 RLASNIVL 255
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 251 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 153
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 11 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 97
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 28.7 bits (61), Expect = 2.6
Identities = 25/65 (38%), Positives = 30/65 (46%)
Frame = -3
Query: 434 STMELTSSGKKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLASNIVL 255
S+ LTSS SSPL ++S L P LT+S S T +SS L L S L
Sbjct: 205 SSSPLTSSSPLTSSSPLTSSSPLTSPSPLTSSSPLTSSSPLT-SSSPLTSSSPLTSPSPL 263
Query: 254 WGSSP 240
SP
Sbjct: 264 TSPSP 268
Score = 27.9 bits (59), Expect = 4.6
Identities = 24/61 (39%), Positives = 28/61 (45%)
Frame = -3
Query: 422 LTSSGKKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLASNIVLWGSS 243
LTSS SSPL + S L P LT+S S T +SS L L S+ L S
Sbjct: 173 LTSSSPLTSSSPLTSPSPLTSPSPLTSSSPLTSSSPLT-SSSPLTSSSPLTSSSPLTSPS 231
Query: 242 P 240
P
Sbjct: 232 P 232
Score = 27.5 bits (58), Expect = 6.1
Identities = 25/65 (38%), Positives = 30/65 (46%)
Frame = -3
Query: 434 STMELTSSGKKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLASNIVL 255
S LTSS SSPL ++S L LT+S S T +SS L L S+ L
Sbjct: 193 SPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPLT-SSSPLTSSSPLTSSSPL 251
Query: 254 WGSSP 240
SSP
Sbjct: 252 TSSSP 256
>SB_6045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = -3
Query: 419 TSSG--KKVLSSPLYATSILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLASNIV-LWG 249
TS G + +S+P A + LGL PS +S Q +S+ L+P++ ++ ++G
Sbjct: 14 TSRGYTRSFVSNPYSALAGLGLNPSALSSSDQSALSSLYSGLLGLKPLQSNKMSLAQMYG 73
Query: 248 SSP 240
SP
Sbjct: 74 GSP 76
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 93 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 236
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 93 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 236
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +2
Query: 104 TYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVS 283
T++ + H I+ N G +TP + T A + + M PT V+
Sbjct: 559 THTTTSITLHPSSAILDNSLGPASTPRTTISSTTHVSSTPIASSSMVMTPTAINPSATVT 618
Query: 284 SDVSSKMLLCKP 319
+ V S ++ KP
Sbjct: 619 TTVPSTSVVVKP 630
>SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)
Length = 1084
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 173 TTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLCK 316
TTP+ + TE GDA + T Q + P ++++ SK LLC+
Sbjct: 92 TTPAAEPLSCTEG-DGDATETLNPPQTTRQQNPPTITNETISKKLLCE 138
>SB_49479| Best HMM Match : R3H (HMM E-Value=0.0079)
Length = 605
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 197 TDTERLIGDAAKNQVAMNPT 256
TD ERL GD K+ V +NPT
Sbjct: 386 TDEERLSGDKDKDVVQVNPT 405
>SB_31018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 52 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 228
L++ N + ++ R GY L R C R + +R + H++L R +RC
Sbjct: 661 LRLVNTRDDKTHGKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTDTETRFCEKRCA 718
Query: 229 QEPGGDEPHNTIFDA 273
G +P N F+A
Sbjct: 719 GTASGMDPKNIPFNA 733
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,173,288
Number of Sequences: 59808
Number of extensions: 409079
Number of successful extensions: 1419
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1001731762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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