Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0044
(481 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 129 9e-31
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 126 1e-29
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 116 1e-26
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 116 1e-26
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 110 6e-25
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 110 6e-25
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 109 8e-25
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 104 3e-23
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 69 2e-12
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 67 5e-12
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 61 4e-10
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 61 4e-10
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 58 4e-09
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 37 0.009
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 30 1.00
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 29 1.3
Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription... 29 2.3
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 28 3.1
Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical p... 28 4.0
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 27 5.3
Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z66497-7|CAE17887.1| 197|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical pr... 27 7.0
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 27 7.0
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 9.3
U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical pr... 27 9.3
AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical ... 27 9.3
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 129 bits (312), Expect = 9e-31
Identities = 57/78 (73%), Positives = 69/78 (88%), Gaps = 1/78 (1%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIEVAYKGEDRTFFPEEVSS 426
PHNT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE++ F PEE+SS
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 427 MVLTKMKETAEAYLGKTV 480
MVL KMKETAEA+LG TV
Sbjct: 123 MVLLKMKETAEAFLGTTV 140
Score = 126 bits (303), Expect = 1e-29
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 245 MNP 253
MNP
Sbjct: 61 MNP 63
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 126 bits (303), Expect = 1e-29
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 245 MNP 253
MNP
Sbjct: 61 MNP 63
Score = 124 bits (300), Expect = 3e-29
Identities = 55/78 (70%), Positives = 68/78 (87%), Gaps = 1/78 (1%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIEVAYKGEDRTFFPEEVSS 426
PHNT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE++ F PEE+SS
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 427 MVLTKMKETAEAYLGKTV 480
MVL KMK+TAEA+L TV
Sbjct: 123 MVLLKMKKTAEAFLEPTV 140
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 116 bits (278), Expect = 1e-26
Identities = 53/77 (68%), Positives = 61/77 (79%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEVSSM 429
P NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP IEV KGE R F PEE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 430 VLTKMKETAEAYLGKTV 480
VL KMKETAE YLG TV
Sbjct: 123 VLQKMKETAETYLGHTV 139
Score = 110 bits (264), Expect = 6e-25
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 245 MNP 253
NP
Sbjct: 61 RNP 63
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 116 bits (278), Expect = 1e-26
Identities = 53/77 (68%), Positives = 61/77 (79%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEVSSM 429
P NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP IEV KGE R F PEE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 430 VLTKMKETAEAYLGKTV 480
VL KMKETAE YLG TV
Sbjct: 123 VLQKMKETAETYLGHTV 139
Score = 110 bits (264), Expect = 6e-25
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 245 MNP 253
NP
Sbjct: 61 RNP 63
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 110 bits (264), Expect = 6e-25
Identities = 49/77 (63%), Positives = 59/77 (76%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEVSSM 429
P NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP +EV +++ F PEEVS+M
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 430 VLTKMKETAEAYLGKTV 480
VL KMKE AE+YLGK V
Sbjct: 154 VLVKMKEIAESYLGKEV 170
Score = 96.3 bits (229), Expect = 1e-20
Identities = 44/59 (74%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP 253
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 110 bits (264), Expect = 6e-25
Identities = 49/77 (63%), Positives = 59/77 (76%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEVSSM 429
P NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP +EV +++ F PEEVS+M
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 430 VLTKMKETAEAYLGKTV 480
VL KMKE AE+YLGK V
Sbjct: 154 VLVKMKEIAESYLGKEV 170
Score = 96.3 bits (229), Expect = 1e-20
Identities = 44/59 (74%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP 253
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 109 bits (263), Expect = 8e-25
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 245 MNP 253
NP
Sbjct: 61 RNP 63
Score = 109 bits (262), Expect = 1e-24
Identities = 50/77 (64%), Positives = 60/77 (77%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEVSSM 429
P NT+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP +EV KGE R F EE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISAM 122
Query: 430 VLTKMKETAEAYLGKTV 480
VL KMKETAEA LG +V
Sbjct: 123 VLQKMKETAEAVLGHSV 139
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 104 bits (250), Expect = 3e-23
Identities = 47/77 (61%), Positives = 57/77 (74%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIEVAYKGEDRTFFPEEVSSM 429
P NTIFDAKRLIGR + + TVQ D+KHWPF++V KP +EV E + F PEEVS+M
Sbjct: 91 PENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAM 150
Query: 430 VLTKMKETAEAYLGKTV 480
VLTKMK+ AE+YLG V
Sbjct: 151 VLTKMKQIAESYLGHEV 167
Score = 98.7 bits (235), Expect = 2e-21
Identities = 46/59 (77%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP 253
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINP 91
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 68.5 bits (160), Expect = 2e-12
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIEVAYKGEDRTFFPEEVSSMV 432
NT+F KRLIGR++ED VQ D+K P+++V + G +E + + + P +V + V
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVE----AQGKVYSPSQVGAFV 148
Query: 433 LTKMKETAEAYLGKTV 480
L KMKETAE+YLG TV
Sbjct: 149 LMKMKETAESYLGTTV 164
Score = 62.9 bits (146), Expect = 1e-10
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 247
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 248 N 250
N
Sbjct: 90 N 90
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 67.3 bits (157), Expect = 5e-12
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIEVAYKGEDRTFFPEEVSSMV 432
NT+F KRLIGR++ED VQ D+K P+++V + G +E + + + P +V + V
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVE----AQGKEYPPSQVGAFV 148
Query: 433 LTKMKETAEAYLGKTV 480
L KMKETAE+YLG TV
Sbjct: 149 LMKMKETAESYLGTTV 164
Score = 62.9 bits (146), Expect = 1e-10
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 247
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 248 N 250
N
Sbjct: 90 N 90
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 61.3 bits (142), Expect = 4e-10
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIEVAYKGEDRTFFPEEVSSMV 432
N++FD KR+IGR+++D +Q DM WPF+V D G P +E+ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 433 LTKMKETAEAYLGKTV 480
L +K AE LG V
Sbjct: 121 LRCLKYNAERKLGLEV 136
Score = 60.5 bits (140), Expect = 6e-10
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPT 256
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 257 TQYSMPNV 280
+ + + +
Sbjct: 62 SLFDVKRI 69
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 61.3 bits (142), Expect = 4e-10
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIEVAYKGEDRTFFPEEVSSMV 432
N++FD KR+IGR+++D +Q DM WPF+V D G P +E+ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 433 LTKMKETAEAYLGKTV 480
L +K AE LG V
Sbjct: 121 LRCLKYNAERKLGLEV 136
Score = 60.5 bits (140), Expect = 6e-10
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPT 256
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 257 TQYSMPNV 280
+ + + +
Sbjct: 62 SLFDVKRI 69
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 57.6 bits (133), Expect = 4e-09
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIEVAYKGEDRTFFPEEV 420
P TI+DAKR IGR FE + +D K +PF++ D GK E+ + +PEE+
Sbjct: 95 PKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEI 154
Query: 421 SSMVLTKMKETAEAYLGKTV 480
S+++ +K A +LG T+
Sbjct: 155 GSLIIGYLKSAAAKHLGVTL 174
Score = 47.2 bits (107), Expect = 6e-06
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +2
Query: 56 KYKMAKAPA--VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIG 220
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 221 DAAKNQVAMNP 253
A Q NP
Sbjct: 85 TRATEQQEHNP 95
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 52.8 bits (121), Expect = 1e-07
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIEVAYKGEDRTFFPEEVSSMV 432
NT+ + K LIGRKF D Q + P +VV ++V+Y GE TF PE+V + +
Sbjct: 62 NTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAAL 121
Query: 433 LTKMKETAEAYL 468
LTK++ E+ L
Sbjct: 122 LTKLRTIVESQL 133
Score = 44.0 bits (99), Expect = 6e-05
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 250
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTN 59
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 36.7 bits (81), Expect = 0.009
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAA 229
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAA 76
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 29.9 bits (64), Expect = 1.00
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 196 HRHRASHRR--CRQEPGGDEPHNTIFDAKRLIGR-KFEDATVQADM 324
H+HR SHR Q+ GDE +N + DA R + ++ D + + M
Sbjct: 347 HQHRKSHRLRPSHQQQYGDEQNNAVADAGRSVNAPEYGDGSAPSHM 392
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/54 (22%), Positives = 29/54 (53%)
Frame = +2
Query: 158 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLCKP 319
D G+ ++V D +++IG+ + + T+Y++ + SS+++L +P
Sbjct: 12 DIGDGLFQTHVQLEDVQKVIGEQMNTKARLGENTKYTVIGDGNGFSSRVILVEP 65
>Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical
protein F52B5.5a protein.
Length = 644
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 459 FGSFLHFRK-HHGTDFLGEKGSVFTLICY 376
F SF + R H + EKGS FTLI Y
Sbjct: 319 FDSFFYIRNSEHEFSYSAEKGSTFTLIMY 347
>AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription
factor CEP-1 protein.
Length = 644
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 459 FGSFLHFRK-HHGTDFLGEKGSVFTLICY 376
F SF + R H + EKGS FTLI Y
Sbjct: 319 FDSFFYIRNSEHEFSYSAEKGSTFTLIMY 347
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 135 GRWRSSPTTR-ATGPLRLMLRSQTPSVSSEMPPRT 236
G W R ATGP + + +Q P + S MPP T
Sbjct: 84 GSWSVEIQERIATGPPQKPISAQKPEIQSPMPPMT 118
>Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.7 protein.
Length = 436
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/54 (20%), Positives = 27/54 (50%)
Frame = +2
Query: 158 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLCKP 319
D G+ ++V D + +IG+ + + T+Y++ + S+++L +P
Sbjct: 12 DNGDGLFQTHVQLDDVQDVIGEQMNTEARLGKNTKYTVVGDGNGFMSRVILVEP 65
>Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical
protein K07F5.14 protein.
Length = 422
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 226 RQEPGGDEPHNTIFDAKRLIGRKFEDATVQAD 321
++ GD+P F +IGRK++D V+ D
Sbjct: 278 KERKDGDDPSTGGFSFLSMIGRKYDDEAVEDD 309
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 259 CCGVHRHLVLGGISDETLGVCERNIRRSGPVA 164
CC H G S T+G C+R S PV+
Sbjct: 58 CCPGTNHCCPPGFSCTTIGTCKRTTTLSNPVS 89
>Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical
protein T16G1.6 protein.
Length = 431
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +2
Query: 137 KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLCK 316
K+ I+ N +G T YV D + IG+ + + T+Y++ + S+++L +
Sbjct: 5 KLTILDNGEGLFQTHVYVK--DVQEAIGEQMNTESRLGENTKYTVVGDGNGFMSRVVLVE 62
Query: 317 P 319
P
Sbjct: 63 P 63
>Z66497-7|CAE17887.1| 197|Caenorhabditis elegans Hypothetical
protein K08F8.7 protein.
Length = 197
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -3
Query: 461 ASAVSFIFVSTMELTSSGKKVLSSPLYATSIL 366
ASAVS +F+ +E T+ K+ L + ++A SIL
Sbjct: 67 ASAVSILFIWDVETTTIVKRCLFTFVFALSIL 98
>Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical
protein T09B9.5 protein.
Length = 363
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 171 LLPWSLAMISTFPCWKTPTQEY-VVPRSIPTAGAFA 67
+LP A TFPC + EY +VP +P+A A
Sbjct: 287 VLPMRDAATRTFPCMLSALPEYSLVPPQVPSASTSA 322
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 372 DLRFASITDNLERPVLHVGLHSSIFELTSDETFGIEY 262
DLR +S L PVL +H+ FEL+S + I Y
Sbjct: 81 DLRSSSDKVLLRLPVLKQEVHNISFELSSSDVLAIMY 117
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical protein
F29G6.3c protein.
Length = 1453
Score = 26.6 bits (56), Expect = 9.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 145 DHRQRPGQQDHSVLCCVHRHRASHRRCRQ 231
+H Q+ + H+ + VH H +H+ RQ
Sbjct: 1107 EHHQKHVHEQHNYIPAVHHHETNHQLDRQ 1135
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
F29G6.3b protein.
Length = 1785
Score = 26.6 bits (56), Expect = 9.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 145 DHRQRPGQQDHSVLCCVHRHRASHRRCRQ 231
+H Q+ + H+ + VH H +H+ RQ
Sbjct: 1107 EHHQKHVHEQHNYIPAVHHHETNHQLDRQ 1135
>U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical
protein T07H6.4 protein.
Length = 702
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 96 WVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMP 227
WV L V+++ W++ PLRL L + +V + +P
Sbjct: 217 WVSNLLPCVTANITNWKTPTNDEMCPPLRLELNQKIFNVENYIP 260
>AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical
protein Y51B9A.6 protein.
Length = 516
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 311 TVASSNLRPMRRLASNIVLWG 249
T SN P+R++ S+IV+WG
Sbjct: 269 TGKGSNETPIRKIVSSIVIWG 289
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 125 RHQRKSTWYPDRFLLR 78
RH+R+ST YPD F LR
Sbjct: 139 RHKRRSTRYPDYFDLR 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,319,979
Number of Sequences: 27780
Number of extensions: 281129
Number of successful extensions: 877
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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