Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0039
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.46 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        24   1.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.5  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   7.5  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   9.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.9  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 139 NGKWYSSPYTHLQRHNIDTYYRHCSP 62
           +G+W  SP  H +++   TYY    P
Sbjct: 73  HGQWNYSPDNHFEQYPNPTYYNLADP 98


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 494 GALLRLNLIPDCHRLGDVLRLNWN 423
           G ++  N+ P    +GD+L +NWN
Sbjct: 436 GGMMNWNM-PSTSVVGDMLNMNWN 458


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -2

Query: 150 FAHPMVSGIQVLIHTFRGTTSTHITATVLHYEFFIYHTIQNR 25
           F + +    Q +     G  +T IT  +  YE  +  TIQ+R
Sbjct: 282 FDNDIKMAAQAIAFFSAGNDTTSITLALTCYELSLNKTIQDR 323


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 231 RGLHNPAPNAINFKKQVLLTEEQFKKHVQKVFKTSIVKV 347
           RG+ N  P   NF+  V +  +  +K   K+  + I KV
Sbjct: 181 RGVLNIIPKQDNFRAIVSIFPDSARKPFFKLLTSKIYKV 219


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 173 NMSPYTSSSPIQW 135
           N+SP T+SSP  W
Sbjct: 298 NLSPKTNSSPDLW 310


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 176 FNMSPYTSSSPIQW 135
           F MS Y  S+PI W
Sbjct: 253 FYMSAYLISNPIMW 266


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 475 ISSPTVTVSATCSVLIGT 422
           ++S   TV A C+V+IGT
Sbjct: 75  LASGDYTVPAGCTVVIGT 92


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 355 LLTMTVQMPTSQTTDCRNQNSTRFQLRRSTSP 450
           +++ T   PT+ TT  R   +T+F  + ST P
Sbjct: 155 VISSTPLPPTTSTTT-RTTLTTKFTTKPSTKP 185


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 383 VGICTVIVSKSFHFN 339
           +G+   I SKSFH N
Sbjct: 45  IGVVVSIYSKSFHRN 59


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 253 GAGLCKPRICHR 218
           GAGL +P + HR
Sbjct: 22  GAGLYEPHVAHR 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,337
Number of Sequences: 336
Number of extensions: 2981
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)