Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0037
(664 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 66 6e-12
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 59 6e-10
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 56 3e-09
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 53 4e-08
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 50 3e-07
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 50 3e-07
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 49 7e-07
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 48 9e-07
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 48 1e-06
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 42 1e-04
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 41 1e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 38 0.001
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 38 0.002
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 31 0.20
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 31 0.20
SPAC7D4.13c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.0
SPBC2F12.11c |rep2||transcriptional activator Rep2|Schizosacchar... 28 1.0
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 27 2.4
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 26 4.2
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 26 4.2
SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces ... 26 4.2
SPCC4B3.11c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 7.4
SPAC1B3.02c |||transcription elongation factor, Elf1 family|Schi... 25 7.4
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 25 7.4
SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces pombe... 25 9.7
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 65.7 bits (153), Expect = 6e-12
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +3
Query: 321 RSGPRTKKQFICKF--CNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRY 494
+S +++ ++C F CN++FT++YNL H THT+ RP+ C IC K+F RQ R H
Sbjct: 561 KSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQ 620
Query: 495 IHS 503
+H+
Sbjct: 621 LHT 623
Score = 41.5 bits (93), Expect = 1e-04
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 342 KQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 488
+ F C C + F + ++ HE+ HT + ++C C + F R D L H
Sbjct: 598 RPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 535 KRVCQSRTLAVHKILHMEESPHKCPVCSRSF 627
KR ++ L H H P +C +C +SF
Sbjct: 579 KRFTRAYNLKSHMNTHTNYRPFQCSICKKSF 609
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 58.8 bits (136), Expect = 6e-10
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Frame = +3
Query: 315 NRRSG-PRTK--KQFICKFCNRQFTKSYNLLIHERT-HTDERPYSCDICGKAFRRQDHLR 482
NR++ PR+ K F+C C+++F +S +L H R+ HT E+P+ C ICGK F R+D+LR
Sbjct: 409 NRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLR 467
Query: 483 DHRYIHSKES 512
H +H S
Sbjct: 468 QHERLHVNAS 477
Score = 26.2 bits (55), Expect = 4.2
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 509 KPFKCLECGKGFVSQEHWRFTRFCTWKNLHTN-VPFAV---EVSTKRSNLKTH 655
K F C EC K F EH R R ++LHT+ PF + ++R NL+ H
Sbjct: 421 KSFVCPECSKKFKRSEHLR--RHI--RSLHTSEKPFVCICGKRFSRRDNLRQH 469
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 56.4 bits (130), Expect = 3e-09
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +3
Query: 327 GPRTKKQFICKF--CNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIH 500
GP +++C + CN++ + YN+ H +TH +RPY CD+C F R L+ H IH
Sbjct: 436 GPEADGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
Score = 40.3 bits (90), Expect = 2e-04
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 342 KQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHR 491
+ + C C F + ++L H R H + RPY C+ C K F R D L H+
Sbjct: 471 RPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRHK 519
Score = 26.6 bits (56), Expect = 3.2
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 535 KRVCQSRTLAVHKILHMEESPHKCPVCSRSF 627
KR+ + + H H+ + P++C +C F
Sbjct: 452 KRIARKYNVESHIQTHLSDRPYRCDLCKAGF 482
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 52.8 bits (121), Expect = 4e-08
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Frame = +3
Query: 309 TKNRRSGPRTKKQFICKF--CNRQFTKSYNLLIHERTHTDERPYSCDI--CGKAFRRQDH 476
+KN RS KK F C + C +++++ L H RTH++ERP+ CD C KAF R+ H
Sbjct: 13 SKNLRSA---KKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSH 69
Query: 477 LRDHRYIHS 503
L+ H+ H+
Sbjct: 70 LKIHKRCHT 78
Score = 49.2 bits (112), Expect = 5e-07
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Frame = +3
Query: 339 KKQFICKF--CNRQFTKSYNLLIHERTHTDERPYSC--DICGKAFRRQDHLRDHRYIHSK 506
++ F+C + C++ F + +L IH+R HT+ +P+SC D C F Q HL H +H K
Sbjct: 50 ERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRK 109
Score = 31.1 bits (67), Expect = 0.15
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 435 SCDICGKAFRRQDHLRDHRYIH 500
SC ICG+ F+ HLR H +H
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLH 226
Score = 28.3 bits (60), Expect = 1.0
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +3
Query: 339 KKQFICKF--CNRQFTKSYNLLIHERT-HTDERPYSCDICGKAFRRQDHLRDH 488
+K + C C + FT+S L H H + CD CG F + L+ H
Sbjct: 233 RKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRH 285
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 50.0 bits (114), Expect = 3e-07
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Frame = +3
Query: 312 KNRRSGPRTKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDI-------CGKAFRRQ 470
K+ + P+ KQ++C+ C R F + +L H R+HT+E+P++C CG+ F R+
Sbjct: 58 KDPNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRR 117
Query: 471 DHLRDHR 491
D L H+
Sbjct: 118 DLLLRHQ 124
Score = 31.9 bits (69), Expect = 0.085
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 426 RPYSCDICGKAFRRQDHLRDHRYIHSKESLSNVSNVE 536
+ Y C+ C +AF R +HL+ H H+ E S ++
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEID 104
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 50.0 bits (114), Expect = 3e-07
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +3
Query: 345 QFICKFCNRQFTKSYNLLIHERTHTDERPYSCDI--CGKAFRRQDHLRDHRYIH 500
++ C C + F++ +L IH +HT ERP+ CD CGKAF + ++R H+ IH
Sbjct: 467 RYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHSKE 509
Y C C + F R L+ H Y H+ E
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGE 493
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 48.8 bits (111), Expect = 7e-07
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Frame = +3
Query: 345 QFICKF--CNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH-RYIH-SKES 512
+F C + C + FT+ +L HERTH + + +SC C +AF R D L H + +H K++
Sbjct: 25 RFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQN 84
Query: 513 LS 518
LS
Sbjct: 85 LS 86
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 342 KQFICKFCNRQFTKSYNLLIH-ERTHTDERPYS 437
K F C FCNR F +S L H ++ H ++ S
Sbjct: 54 KAFSCSFCNRAFARSDVLNRHVQQMHLQKQNLS 86
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 48.4 bits (110), Expect = 9e-07
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 342 KQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDI--CGKAFRRQDHLRDHRYIHSKESL 515
K + C FC R F + + + H R+HT E+P+ C C K F R+D L H H +++L
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKAL 61
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 48.0 bits (109), Expect = 1e-06
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +3
Query: 330 PRTKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDI--CGKAFRRQDHLRDHRYIHS 503
P + + C C + F + + H RTHT E+P+ C C K F R D L H IH+
Sbjct: 20 PDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Query: 504 KESLSNVSNVEKGLSVKNIGGSQDSAHGRI 593
+ ++ N + N S +S G +
Sbjct: 80 --NANSRRNAAAAAAANNSARSSNSPAGNL 107
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 476 PKRSQVHPF*RKPFKCLECGKGFVSQEH 559
P RS +P +P+KC C K F EH
Sbjct: 13 PSRSTKNPDAPRPYKCPLCTKAFYRLEH 40
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 336 TKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH-RYIHSKES 512
+K+ F C C ++FT+ NL H+ H+ P C C +R+D L+ H + H+ +S
Sbjct: 27 SKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKS 86
Query: 513 LSNVSNVEKGLSVKNIGGSQD 575
+ + + L VK Q+
Sbjct: 87 VIEEGSKDV-LDVKAAASQQE 106
Score = 29.5 bits (63), Expect = 0.45
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +1
Query: 505 KKAFQMSRMWKRVCQSRTLAVHKILHMEESPHKCPVCSRSFNQK 636
K+ F + KR + L HK H + P CP C +K
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRK 71
Score = 25.4 bits (53), Expect = 7.4
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +2
Query: 443 HLRKGFPSARSPKRSQVHPF*---RKPFKCLECGKGFVSQEHWRFTRFCTWKNLHTNVPF 613
H+ + + S KR P ++ F C +C K F E+ + C K P+
Sbjct: 4 HVSENSTNVLSAKRKLTEPSLIDSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPY 63
Query: 614 AVEVSTKRSN-LKTHL 658
E+ KR + LK H+
Sbjct: 64 C-EIKCKRKDLLKRHI 78
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 41.1 bits (92), Expect = 1e-04
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Frame = +3
Query: 378 TKSYNLLIHERTHTDERPYSCDI--CGKAFRRQDHLRDH-RYIHSKESLSNVSNVEKG-- 542
T + L+ H R+HT E+P+ C + C ++F R D L H R +H ++L + K
Sbjct: 88 TSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEADTLRPSDPIPKAHP 147
Query: 543 LSVKNIGGS--QDSAHGRISTQM 605
+ +N+ + Q + R QM
Sbjct: 148 MHPQNVANAMVQSAREARAQQQM 170
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +3
Query: 339 KKQFICKF--CNRQFTKSYNLLIHERT 413
+K FIC C+R FT+S L H RT
Sbjct: 103 EKPFICSVPECDRSFTRSDALAKHMRT 129
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 37.9 bits (84), Expect = 0.001
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 345 QFICKF--CNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 488
++ C F C + FT+ + H R+HT+ + + C C +F R D L H
Sbjct: 16 RYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = +3
Query: 432 YSCDI--CGKAFRRQDHLRDHRYIHS 503
Y CD C K+F R++H R H H+
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHT 42
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 37.5 bits (83), Expect = 0.002
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = +3
Query: 357 KFCNRQFTKSYNLLIHERT-HTDERP-YSCDICG--KAFRRQDHLRDH 488
+ CN F+++Y+L+ H+ T H RP + C+ICG + F R D L H
Sbjct: 583 EICNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRH 630
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 30.7 bits (66), Expect = 0.20
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 342 KQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICG 452
K ++C FCN++F+ S ++L T+E ++C++CG
Sbjct: 134 KGYVCPFCNKKFS-SLDVL---SLVTNEGTFACNVCG 166
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 30.7 bits (66), Expect = 0.20
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 402 HERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKESLS 518
H+ + +PY C++C K ++ + L+ HR HS +S
Sbjct: 389 HQGFVVENKPYRCEVCSKRYKNLNGLKYHR-THSHLQVS 426
>SPAC7D4.13c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 312
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 576 NLVNRQCS*LTNPFPHSRHLKGFL*NGCTCDLLGDLA 466
NL+ S L +PF +RHL F+ T + LGD++
Sbjct: 111 NLLEFSKSSLLHPFKRNRHLLSFVPYPMTAETLGDIS 147
>SPBC2F12.11c |rep2||transcriptional activator
Rep2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 219
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 333 RTKKQFICKFCNRQFTKSYNLLIHERTHTDERPY 434
R IC CN F S L++HE T ++ P+
Sbjct: 170 RPTPNLICSKCNTTFNHSTALMMHEATCLNQVPF 203
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 27.1 bits (57), Expect = 2.4
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 462 RRQDHLRDHRYIHSKESLSNVSNVEKGLSVKN 557
R+Q H+ + +H + S++ NV+ S+KN
Sbjct: 308 RKQQHIVKNTKVHDNDYFSSIPNVDDIRSIKN 339
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 568 HKILHMEESPHKCPVCSRSFNQKVEPEDPPSN 663
H + + P CP C+ F + VEP P +
Sbjct: 11 HSCSNEFQRPGNCPRCNSDFVEMVEPNTAPED 42
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +3
Query: 354 CKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDH 476
C+ + F +SY+LL E + P I G+A + H
Sbjct: 263 CQSSKKYFNRSYSLLKDEVNRLNPSPLENQIVGRAHGKTPH 303
>SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 362
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 394 CLFMNELTQMR---GRILATSAERLSVGKIT*EITGTSILKKAFQMSRMWKRVCQSRTLA 564
CL++ E ++ G+ +A + R+S E T I K AF++++ +++ +S T +
Sbjct: 131 CLYVKEERMVQNTPGKRVAEAIRRIS------EEASTKIGKMAFEIAKSRQKIRESGTYS 184
Query: 565 VHK 573
+HK
Sbjct: 185 IHK 187
>SPCC4B3.11c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 116
Score = 25.4 bits (53), Expect = 7.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHS--KESLSNVSNVEKGLSVK---NIGGSQDSA 581
Y I KAF+ ++ L HR ++S KE + N+ + V+ + GGS S+
Sbjct: 62 YQVAIKSKAFQGKNTLAQHRLVNSILKEEIRNMHGLNLSTEVEDDISAGGSTTSS 116
>SPAC1B3.02c |||transcription elongation factor, Elf1
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 107
Score = 25.4 bits (53), Expect = 7.4
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 312 KNRRSGPRTKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKA 458
K +R P F C FCN + KS + + +++ C ICG++
Sbjct: 11 KPKRRAPPLDTTFTCLFCNHE--KSVSCSLDKQSGVGN--LHCKICGQS 55
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 392 IIRFCKLPIAKFTDKLLLCPR 330
I R C+ I DKL LCPR
Sbjct: 642 IARCCRADIISSIDKLSLCPR 662
>SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 377
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 87 KTSSLWNSIWNRHQKDTATIP 149
++SS WNS+W+R+ D A+ P
Sbjct: 43 QSSSWWNSLWSRN-TDVASEP 62
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,506,221
Number of Sequences: 5004
Number of extensions: 47599
Number of successful extensions: 204
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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