Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0037
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    52   1e-08
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    30   0.057
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    29   0.13 
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   6.5  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    23   8.6  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    23   8.6  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 52.4 bits (120), Expect = 1e-08
 Identities = 21/54 (38%), Positives = 29/54 (53%)
 Frame = +3

Query: 339 KKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIH 500
           +K F C  C       + L  H R HT E+PYSCD+C   F + + L+ H+ IH
Sbjct: 237 EKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIH 290



 Score = 51.2 bits (117), Expect = 3e-08
 Identities = 19/65 (29%), Positives = 37/65 (56%)
 Frame = +3

Query: 309 TKNRRSGPRTKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 488
           T+ +R+   T   ++C +CN    K + L  H +TH+++RP+ C +C + F+    L++H
Sbjct: 114 TRGKRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNH 173

Query: 489 RYIHS 503
              H+
Sbjct: 174 VNTHT 178



 Score = 45.2 bits (102), Expect = 2e-06
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +3

Query: 339 KKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH-RYIHSKE 509
           +K + C++C        +L  H   HTD++PY CD C + FR++  L+ H  Y H+ +
Sbjct: 352 EKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPD 409



 Score = 44.0 bits (99), Expect = 4e-06
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +3

Query: 342 KQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKE 509
           K   CK C+  F   Y+  +H +TH  E+ Y C+ C  A     HL  H  +H+ +
Sbjct: 325 KPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQ 380



 Score = 39.5 bits (88), Expect = 9e-05
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +3

Query: 354 CKFCNRQFTKSYNLLIHER-THTDERPYSCDICGKAFRRQDHLRDHRYIHSKE 509
           CK C+  FT S  L+ H R  HT ERP+ C  C  A      L+ H   H+ E
Sbjct: 185 CKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGE 237



 Score = 37.9 bits (84), Expect = 3e-04
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +3

Query: 354 CKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH-RYIHSKE 509
           C  C R F    +L  H  THT  +P+ C  C   F     L  H RY H+ E
Sbjct: 157 CVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHE 209



 Score = 35.1 bits (77), Expect = 0.002
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = +3

Query: 354 CKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKE 509
           C  C+    +   L  H RTHT E+P+ C  C  A   +  L  H  IH+ E
Sbjct: 214 CTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGE 265



 Score = 34.3 bits (75), Expect = 0.003
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 553 RTLAVHKILHMEESPHKCPVCSRSFNQK 636
           R L  H +LH ++ P+KC  C+++F QK
Sbjct: 368 RHLESHLLLHTDQKPYKCDQCAQTFRQK 395



 Score = 31.5 bits (68), Expect = 0.025
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 559 LAVHKILHMEESPHKCPVCSRSF 627
           L+ H   H E+ PHKC VC R F
Sbjct: 142 LSRHLKTHSEDRPHKCVVCERGF 164



 Score = 25.8 bits (54), Expect = 1.2
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +1

Query: 559 LAVHKILHMEESPHKCPVCSRSFNQ 633
           L  H  +H  E P+ C VC   F Q
Sbjct: 255 LTRHMRIHTGEKPYSCDVCFARFTQ 279



 Score = 25.0 bits (52), Expect = 2.1
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +3

Query: 342 KQFICKFCNRQFTKSYNLLIHERTHTDERPYS 437
           K  IC  C R F    NL+ H   H  E   S
Sbjct: 418 KTHICPTCKRPFRHKGNLIRHMAMHDPESTVS 449


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 30.3 bits (65), Expect = 0.057
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +3

Query: 354 CKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 488
           CK C +  T   N   H   H   R + C +C   + R D+LR H
Sbjct: 502 CKLCGKVVTHIRN---HYHVHFPGR-FECPLCRATYTRSDNLRTH 542


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 29.1 bits (62), Expect = 0.13
 Identities = 11/47 (23%), Positives = 25/47 (53%)
 Frame = +3

Query: 348  FICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 488
            + C  C++  +  ++   H   H  +  + C +CG+ F R+D+++ H
Sbjct: 899  YSCVSCHKTVSNRWH---HANIHRPQS-HECPVCGQKFTRRDNMKAH 941



 Score = 26.2 bits (55), Expect = 0.92
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 568 HKILHMEESPHKCPVCSRSFNQK 636
           H  +H  +S H+CPVC + F ++
Sbjct: 914 HANIHRPQS-HECPVCGQKFTRR 935


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 381  KSYNLLIHERTHTDERPY 434
            ++Y+ L   RTH+ ERP+
Sbjct: 1052 RNYHTLTTTRTHSTERPF 1069


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 586 EESPHKCPVCSRSF 627
           EE P KC VC  SF
Sbjct: 241 EELPFKCYVCRESF 254


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 586 EESPHKCPVCSRSF 627
           EE P KC VC  SF
Sbjct: 241 EELPFKCYVCRESF 254


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,305
Number of Sequences: 2352
Number of extensions: 11783
Number of successful extensions: 43
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)