Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0037
(664 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 46 2e-05
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 44 7e-05
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 40 0.002
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 36 0.018
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 36 0.024
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 36 0.032
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 34 0.073
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 34 0.073
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 34 0.097
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 34 0.097
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 33 0.13
At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein ... 27 0.16
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 33 0.17
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 33 0.22
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 32 0.30
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 32 0.30
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 32 0.30
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 32 0.30
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 32 0.30
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 32 0.30
At3g13590.1 68416.m01711 DC1 domain-containing protein contains ... 32 0.39
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 31 0.52
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 31 0.52
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 31 0.52
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 31 0.68
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 31 0.68
At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein ... 31 0.68
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 31 0.68
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 31 0.90
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 31 0.90
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 31 0.90
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 30 1.2
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 30 1.2
At5g48890.1 68418.m06048 hypothetical protein 30 1.6
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 30 1.6
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 30 1.6
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 30 1.6
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 29 2.1
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 29 2.1
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 29 2.1
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 29 2.1
At1g66140.1 68414.m07506 zinc finger (C2H2 type) family protein ... 29 2.1
At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein ... 29 2.8
At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein ... 29 2.8
At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein ... 29 2.8
At2g19385.1 68415.m02261 expressed protein weak similarity to Ce... 29 3.6
At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein ... 29 3.6
At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein ... 28 4.8
At5g14010.1 68418.m01638 zinc finger (C2H2 type) family protein ... 28 4.8
At5g05120.1 68418.m00543 zinc finger (C2H2 type) family protein ... 28 4.8
At4g22410.1 68417.m03238 ubiquitin carboxyl-terminal hydrolase f... 28 4.8
At4g22350.1 68417.m03231 ubiquitin carboxyl-terminal hydrolase f... 28 4.8
At4g22290.1 68417.m03224 ubiquitin carboxyl-terminal hydrolase f... 28 4.8
At3g57490.1 68416.m06400 40S ribosomal protein S2 (RPS2D) 40S ri... 28 4.8
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 28 4.8
At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ... 28 4.8
At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C) 28 4.8
At1g59359.1 68414.m06677 40S ribosomal protein S2 (RPS2B) simila... 28 4.8
At1g58983.1 68414.m06666 40S ribosomal protein S2, putative simi... 28 4.8
At1g58684.1 68414.m06657 40S ribosomal protein S2, putative 28 4.8
At1g58380.1 68414.m06642 40S ribosomal protein S2 (RPS2A) simila... 28 4.8
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 28 4.8
At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein ... 28 4.8
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 28 6.4
At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein ... 28 6.4
At3g51570.1 68416.m05648 disease resistance protein (TIR-NBS-LRR... 28 6.4
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 28 6.4
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 28 6.4
At3g03440.1 68416.m00342 armadillo/beta-catenin repeat family pr... 28 6.4
At2g01620.1 68415.m00088 expressed protein 28 6.4
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 28 6.4
At5g54340.1 68418.m06767 zinc finger (C2H2 type) protein-related... 27 8.4
At5g52350.1 68418.m06496 exocyst subunit EXO70 family protein st... 27 8.4
At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein ... 27 8.4
At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein ... 27 8.4
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 27 8.4
At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein ... 27 8.4
At1g68360.1 68414.m07808 zinc finger protein-related similar to ... 27 8.4
At1g48880.1 68414.m05476 hypothetical protein 27 8.4
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 27 8.4
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +3
Query: 339 KKQFIC--KFCNRQFTKSYNLLIHERTHTDERPYSCDI--CGKAFRRQDHLRDHRYIHSK 506
++Q++C + C ++F S L H HT ER Y C CGKAF +LR H HS+
Sbjct: 105 ERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQ 164
Query: 507 ES 512
E+
Sbjct: 165 EN 166
Score = 34.3 bits (75), Expect = 0.073
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +3
Query: 339 KKQFICKF--CNRQFTKSYNLLIHERTHTDERPYSCDI--CGKAFRRQDHLRDH 488
++ +IC + C + F+ +NL H +TH+ E + C C K + + L++H
Sbjct: 135 ERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNH 188
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +3
Query: 354 CKFCNRQFTKSYNLLIHERTHTDERPYSC--DICGKAFRRQDHLRDHRYIH 500
C+ C +F K +L H ++H+ ER ++C D C ++RR+DHL H H
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTH 118
Score = 31.1 bits (67), Expect = 0.68
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 18/82 (21%)
Frame = +3
Query: 318 RRSGPRTKKQFICKFCNRQFTKSYNLLIHERTH---------------TDERP---YSCD 443
+ S + + ++C++C +K+Y + H ++H DE ++C
Sbjct: 10 KTSAKKDIRNYLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEVDEESSSNHTCQ 69
Query: 444 ICGKAFRRQDHLRDHRYIHSKE 509
CG F++ HL+ H HS E
Sbjct: 70 ECGAEFKKPAHLKQHMQSHSLE 91
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 363 CNRQFTKSYNLLIHERTHTDERPYSCDI--CGKAFRRQDHLRDHRYIHSKE 509
C ++F L++H+R H DERP+ C C F+ Q +H +H+ E
Sbjct: 1245 CGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGE 1295
Score = 35.1 bits (77), Expect = 0.042
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +3
Query: 333 RTKKQFIC--KFCNRQFTKSYNLLIHERTHTDERPYSC--DICGKAFRRQDHLRDHR 491
+ ++ F C K C+ F + H R HT ERPY C D CG +FR HR
Sbjct: 1263 KDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSRHR 1319
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 36.3 bits (80), Expect = 0.018
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 354 CKFCNRQFTKSYNLLIHERT--HTDERPYSCDICGKAFRRQDHLRDH 488
C C RQF K +L+ H R H+ P +C IC K R D LR+H
Sbjct: 8 CGGCYRQFNKKEHLVEHMRISYHSVHEP-TCGICNKHCRSFDSLREH 53
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 35.9 bits (79), Expect = 0.024
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 333 RTKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKES 512
++ K+ + + + ++ YN + R T R Y C+ CGK F+ L HR H K
Sbjct: 143 KSNKEVVEEIETEEESEGYNKI--NRATTKGR-YKCETCGKVFKSYQALGGHRASHKKNR 199
Query: 513 LSN 521
+SN
Sbjct: 200 VSN 202
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 35.5 bits (78), Expect = 0.032
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 417 TDERPYSCDICGKAFRRQDHLRDHRYIHSKESLSNVSNVEKGLS 548
+D R Y C +CGK+F L H+ H K + +++++ + LS
Sbjct: 92 SDHRDYKCTVCGKSFSSYQALGGHKTSHRKPTNTSITSGNQELS 135
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 34.3 bits (75), Expect = 0.073
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Frame = +3
Query: 342 KQFIC--KFCNRQFTKSYNLLIHERTHTDERPYSCDI--CGKAFR----RQDHLRDH 488
K+ IC K C + F L+ H+R H+D+RP C C F+ R +H+R H
Sbjct: 1258 KRNICPIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVH 1314
Score = 31.1 bits (67), Expect = 0.68
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 357 KFCNRQFTKSYNLLIHERTHTDERPYSC--DICGKAFRRQDHLRDHR 491
K C F +++ H R HT RPY C CG+ FR H+
Sbjct: 1295 KGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRHK 1341
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 34.3 bits (75), Expect = 0.073
Identities = 20/83 (24%), Positives = 34/83 (40%)
Frame = +3
Query: 339 KKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKESLS 518
+K++ C C++++ + H +T + Y CD CG F R+D HR
Sbjct: 155 EKKWKCDKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTIFSRRDSYITHRAFCDALIQE 212
Query: 519 NVSNVEKGLSVKNIGGSQDSAHG 587
+ N + GG + HG
Sbjct: 213 SARNPTVSFTAMAAGGGGGARHG 235
Score = 31.5 bits (68), Expect = 0.52
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 345 QFICKFCNRQFTKSYNLLIHERTH 416
+F+C+ CN+ F + NL +H R H
Sbjct: 81 RFLCEVCNKGFQREQNLQLHRRGH 104
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHSKE-SLSNVSNVE 536
+ C++C K F+R+ +L+ HR H+ L SN E
Sbjct: 82 FLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKE 117
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 33.9 bits (74), Expect = 0.097
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 336 TKKQFICKFCNRQFTKSYNLLIHERTH 416
T +FIC+ CN+ F + NL +H R H
Sbjct: 64 TTNRFICEVCNKGFKRDQNLQLHRRGH 90
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHS 503
+ C++C K F+R +L+ HR H+
Sbjct: 68 FICEVCNKGFKRDQNLQLHRRGHN 91
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 33.9 bits (74), Expect = 0.097
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 312 KNRRSGPRTKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHR 491
K+ R KQ+IC+ C++ + + H +T R +SCD CG+ F R + +H+
Sbjct: 136 KHFRRKHSNHKQWICERCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEHQ 193
Score = 31.1 bits (67), Expect = 0.68
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 330 PRT---KKQFICKFCNRQFTKSYNLLIHERTH 416
PRT +++C+ CN+ F + NL +H R H
Sbjct: 61 PRTLLESDRYVCEICNQGFQRDQNLQMHRRRH 92
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 408 RTHTDERPYSCDICGKAFRRQDHLRDHRYIH 500
RT + Y C+IC + F+R +L+ HR H
Sbjct: 62 RTLLESDRYVCEICNQGFQRDQNLQMHRRRH 92
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 339 KKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCD 443
+++F+CKFC+++F +L H RTH +E D
Sbjct: 6 ERKFVCKFCSKRFPCGKSLGGHIRTHMNENSADSD 40
>At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 170
Score = 27.5 bits (58), Expect(2) = 0.16
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = +3
Query: 408 RTHTDERPYSCDICGKAFRRQD----HLRDHRYIHSKESLSNV 524
+T T ++C ICG F H+R HR +E SNV
Sbjct: 78 KTTTTTTAHTCPICGLEFPMGQALGGHMRKHRNEKEREKASNV 120
Score = 24.6 bits (51), Expect(2) = 0.16
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 333 RTKKQFICKFCNRQFTKSYNLLIHERTHT 419
R K+ F CK C R F L H +H+
Sbjct: 31 RKKRVFRCKTCERDFDSFQALGGHRASHS 59
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 354 CKFCNRQFTKSYNLLIHERT--HTDERPYSCDICGKAFRRQDHLRDH 488
C C RQF K +L+ H + H+ P +C +C K R + LR+H
Sbjct: 17 CAACYRQFNKLEHLVEHMKISYHSGHEP-TCGVCKKHCRSFESLREH 62
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 32.7 bits (71), Expect = 0.22
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 345 QFICKFCNRQFTKSYNLLIHERTH 416
+FIC+ CN+ F + NL +H+R H
Sbjct: 91 RFICEVCNKGFQRDQNLQLHKRGH 114
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 32.3 bits (70), Expect = 0.30
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 345 QFICKFCNRQFTKSYNLLIHERTH 416
+F+C+ CN+ F + NL +H R H
Sbjct: 60 RFVCEICNKGFQRDQNLQLHRRGH 83
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHS 503
+ C+IC K F+R +L+ HR H+
Sbjct: 61 FVCEICNKGFQRDQNLQLHRRGHN 84
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 32.3 bits (70), Expect = 0.30
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 345 QFICKFCNRQFTKSYNLLIHERTH 416
+F+C+ CN+ F + NL +H R H
Sbjct: 81 RFVCEICNKGFQRDQNLQLHRRGH 104
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHS 503
+ C+IC K F+R +L+ HR H+
Sbjct: 82 FVCEICNKGFQRDQNLQLHRRGHN 105
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 32.3 bits (70), Expect = 0.30
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 345 QFICKFCNRQFTKSYNLLIHERTH 416
+F+C+ CN+ F + NL +H R H
Sbjct: 81 RFVCEICNKGFQRDQNLQLHRRGH 104
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHS 503
+ C+IC K F+R +L+ HR H+
Sbjct: 82 FVCEICNKGFQRDQNLQLHRRGHN 105
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 32.3 bits (70), Expect = 0.30
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 345 QFICKFCNRQFTKSYNLLIHERTH 416
+F+C+ CN+ F + NL +H R H
Sbjct: 62 RFVCEICNKGFQRDQNLQLHRRGH 85
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHS 503
+ C+IC K F+R +L+ HR H+
Sbjct: 63 FVCEICNKGFQRDQNLQLHRRGHN 86
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 32.3 bits (70), Expect = 0.30
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 345 QFICKFCNRQFTKSYNLLIHERTH 416
+F+C+ CN+ F + NL +H R H
Sbjct: 98 RFVCEICNKGFQRDQNLQLHRRGH 121
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHS 503
+ C+IC K F+R +L+ HR H+
Sbjct: 99 FVCEICNKGFQRDQNLQLHRRGHN 122
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 345 QFICKFCNRQFTKSYNLLIHERTH 416
+FIC+ CN+ F + NL +H R H
Sbjct: 80 RFICEVCNKGFQREQNLQLHRRGH 103
Score = 28.7 bits (61), Expect = 3.6
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHS 503
+ C++C K F+R+ +L+ HR H+
Sbjct: 81 FICEVCNKGFQREQNLQLHRRGHN 104
>At3g13590.1 68416.m01711 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 513
Score = 31.9 bits (69), Expect = 0.39
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Frame = +3
Query: 348 FICKFCNRQFTKS----YNLLIHERTHT---DERPYSCDICGKAFRRQD 473
+ C+ C F K N IHE T T E P+ CD+CG+ + D
Sbjct: 65 YYCRECRSHFHKDCLTIINAKIHEHTLTFIRRENPFPCDVCGRDDKGMD 113
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 31.5 bits (68), Expect = 0.52
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 345 QFICKFCNRQFTKSYNLLIHERTH 416
+F C+ CN+ F + NL +H+R H
Sbjct: 5 RFFCEICNKGFQREQNLQLHKRGH 28
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHS 503
+ C+IC K F+R+ +L+ H+ H+
Sbjct: 6 FFCEICNKGFQREQNLQLHKRGHN 29
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 31.5 bits (68), Expect = 0.52
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 345 QFICKFCNRQFTKSYNLLIHERTH 416
+FIC CN+ F + NL +H R H
Sbjct: 82 RFICDVCNKGFQREQNLQLHRRGH 105
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHS 503
+ CD+C K F+R+ +L+ HR H+
Sbjct: 83 FICDVCNKGFQREQNLQLHRRGHN 106
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 31.5 bits (68), Expect = 0.52
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 330 PRT---KKQFICKFCNRQFTKSYNLLIHERTH 416
PRT ++IC+ CN+ F + NL +H R H
Sbjct: 58 PRTLLESDRYICEICNQGFQRDQNLQMHRRRH 89
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 408 RTHTDERPYSCDICGKAFRRQDHLRDHRYIH 500
RT + Y C+IC + F+R +L+ HR H
Sbjct: 59 RTLLESDRYICEICNQGFQRDQNLQMHRRRH 89
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 31.1 bits (67), Expect = 0.68
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 438 CDICGKAFRRQDHLRDHRYIHSKE 509
C ICGK F+R +LR H H E
Sbjct: 219 CQICGKGFKRDANLRMHMRAHGDE 242
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 31.1 bits (67), Expect = 0.68
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 423 ERPYSCDICGKAFRRQDHLRDHRYIHSKESLSNVSN 530
++ Y C +CGK+F L H+ H K +V+N
Sbjct: 91 QKDYKCSVCGKSFPSYQALGGHKTSHRKPVSVDVNN 126
>At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 172
Score = 31.1 bits (67), Expect = 0.68
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 420 DERPYSCDICGKAFRRQDHLRDHRYIHSKE 509
+ R Y CDIC + F L H IH +E
Sbjct: 17 NRRTYDCDICKRGFTNPQALGGHNNIHRRE 46
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 31.1 bits (67), Expect = 0.68
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 330 PRT---KKQFICKFCNRQFTKSYNLLIHERTH 416
PRT +++C+ CN+ F + NL +H R H
Sbjct: 30 PRTLLESDRYVCEICNQGFQRDQNLQMHRRRH 61
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 408 RTHTDERPYSCDICGKAFRRQDHLRDHRYIH 500
RT + Y C+IC + F+R +L+ HR H
Sbjct: 31 RTLLESDRYVCEICNQGFQRDQNLQMHRRRH 61
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 30.7 bits (66), Expect = 0.90
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 327 GPRTKKQFICKFCNRQFTKSYNLLIHERTH 416
GP ++Q+ C+ CNR F L H++ H
Sbjct: 267 GPIVRRQYECQICNRMFASGQALGGHKKIH 296
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHSKESL 515
Y+CD CGK R L HR H + L
Sbjct: 228 YTCDTCGKVLRSYQALGGHRTSHKYKRL 255
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 30.7 bits (66), Expect = 0.90
Identities = 16/70 (22%), Positives = 32/70 (45%)
Frame = +3
Query: 333 RTKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKES 512
R ++ C +C+R+F L+ H++ + + C +C K + H KE+
Sbjct: 7 RATEKVWCYYCDREFDDEKILVQHQKA----KHFKCHVCHKKLSTASGMVIHVLQVHKEN 62
Query: 513 LSNVSNVEKG 542
++ V N + G
Sbjct: 63 VTKVPNAKDG 72
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 30.7 bits (66), Expect = 0.90
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHS 503
+ C+ICGK F+R +L+ HR H+
Sbjct: 70 FLCEICGKGFQRDQNLQLHRRGHN 93
Score = 29.5 bits (63), Expect = 2.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 345 QFICKFCNRQFTKSYNLLIHERTH 416
+F+C+ C + F + NL +H R H
Sbjct: 69 RFLCEICGKGFQRDQNLQLHRRGH 92
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHS 503
+ C++CGK F+R +L+ HR H+
Sbjct: 66 FLCEVCGKGFQRDQNLQLHRRGHN 89
Score = 29.1 bits (62), Expect = 2.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 345 QFICKFCNRQFTKSYNLLIHERTH 416
+F+C+ C + F + NL +H R H
Sbjct: 65 RFLCEVCGKGFQRDQNLQLHRRGH 88
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 414 HTDERPYSCDICGKAFRRQDHLRDHRYIHSKE 509
H ++C IC K F R ++++ H + H E
Sbjct: 174 HVGPMQFACSICSKTFNRYNNMQMHMWGHGSE 205
>At5g48890.1 68418.m06048 hypothetical protein
Length = 173
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 348 FICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHS 503
F C FC+R+F S L H+ H ER +A R D + ++ ++H+
Sbjct: 35 FPCLFCSRKFHSSQALGGHQNAHKKER----TAARRAKRAYDFVNNNDFLHT 82
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 426 RPYSCDICGKAFRRQDHLRDHRYIHSKE 509
R YSC CG+ F+ L H +H ++
Sbjct: 53 RSYSCSFCGREFKSAQALGGHMNVHRRD 80
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 384 SYNLLIHERTHT-DERPYSCDICGKAFRRQDHLRDHRYIHSKE 509
SY +L E+ + C ICGK F+R +LR H H E
Sbjct: 227 SYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDE 269
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 384 SYNLLIHERTHT-DERPYSCDICGKAFRRQDHLRDHRYIHSKE 509
SY +L E+ + C ICGK F+R +LR H H E
Sbjct: 227 SYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDE 269
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 509 KPFKCLECGKGFVSQEHWR 565
KPF C +CGK F + WR
Sbjct: 299 KPFMCRKCGKAFAVRGDWR 317
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 342 KQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 488
K F+C+ C + F + HE+ + + C ICG F+ + L+DH
Sbjct: 299 KPFMCRKCGKAFAVRGDWRTHEKNCG--KLWYC-ICGSDFKHKRSLKDH 344
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 426 RPYSCDICGKAFRRQDHLRDHRYIHSKE 509
RPY C+ C + F L H IH K+
Sbjct: 19 RPYICEFCERGFSNAQALGGHMNIHRKD 46
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +3
Query: 381 KSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKESLSNVSNVEKGLS 548
K L H +HT + + C C K F L HR H K L+ K LS
Sbjct: 31 KQIGLNQHTESHTSNQ-FECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDVKHLS 85
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 315 NRRSGPRTKKQFICKFCNRQFTKSYNLLIHERTH 416
N+ + T QF CK CN++F+ L H +H
Sbjct: 36 NQHTESHTSNQFECKTCNKRFSSFQALGGHRASH 69
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +3
Query: 423 ERPYSC--DICGKAFRRQDHLRDHRYIH 500
ER ++C D C ++RR+DHL H H
Sbjct: 3 ERSFTCYVDDCAASYRRKDHLNRHLLTH 30
>At1g66140.1 68414.m07506 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 260
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 336 TKKQFICKFCNRQFTKSYNLLIHERTHTDER 428
+K+ F C +C R+F S L H+ H ER
Sbjct: 81 SKRVFSCNYCQRKFYSSQALGGHQNAHKRER 111
>At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 215
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 348 FICKFCNRQFTKSYNLLIHERTHTDER 428
F C FC ++F+ S L H+ H ER
Sbjct: 67 FACTFCKKEFSTSQALGGHQNAHKQER 93
>At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 405
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 375 FTKSYNLLIHERTHTDERP--YSCDICGKAFRRQDHLRDHRYIHSKESLSNVSNVEKGLS 548
F + L E+ ++E P Y+C IC K +R H +S S+V V +G S
Sbjct: 47 FEARQSALAQEKNKSNEAPMLYTCAICAKGYRSSKAHEQH-----LQSRSHVLRVSQGTS 101
Query: 549 VKNIGGSQDSA 581
I G +D A
Sbjct: 102 ---INGEEDIA 109
>At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 404
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 375 FTKSYNLLIHERTHTDERP--YSCDICGKAFRRQDHLRDHRYIHSKESLSNVSNVEKGLS 548
F + L E+ ++E P Y+C IC K +R H +S S+V V +G S
Sbjct: 47 FEARQSALAQEKNKSNEAPMLYTCAICAKGYRSSKAHEQH-----LQSRSHVLRVSQGTS 101
Query: 549 VKNIGGSQDSA 581
I G +D A
Sbjct: 102 ---INGEEDIA 109
>At2g19385.1 68415.m02261 expressed protein weak similarity to Cell
growth regulating nucleolar protein (Swiss-Prot:Q08288)
[Mus musculus]
Length = 275
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/95 (22%), Positives = 35/95 (36%)
Frame = +3
Query: 327 GPRTKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSK 506
G + + C CN + T LL H D + + KAF + + +K
Sbjct: 88 GLSNRYPWFCSLCNTKATSQQTLL----AHADGKKHRGK--AKAFHARQQQEQSTTLDNK 141
Query: 507 ESLSNVSNVEKGLSVKNIGGSQDSAHGRISTQMSR 611
+ N SNV+ ++ S A+G + R
Sbjct: 142 DGSENASNVDSEQKKVDLPASSGVANGESHPEKKR 176
>At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein
(ZFP6) identical to zinc finger protein, ZFP6
gi|790683|gb|AAA87302; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 197
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 324 SGPRTKKQFICKFCNRQFTKSYNLLIHERTHTDER 428
SG ++K + C++C R+F S L H+ H ER
Sbjct: 34 SGSESRK-YECQYCCREFANSQALGGHQNAHKKER 67
>At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein
(ZFP3) identical to zinc finger protein, ZFP3
gi|790677|gb|AAA87299; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 235
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 315 NRRSGPRTKKQFICKFCNRQFTKSYNLLIHERTHTDER 428
N + +K F C +C R F S L H+ H ER
Sbjct: 50 NESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRER 87
>At5g14010.1 68418.m01638 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 161
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 330 PRTKKQFICKFCNRQFTKSYNLLIHERTHTDER 428
P + + F C++C R+F S L H+ H ER
Sbjct: 32 PASHRLFPCQYCPRKFYTSQALGGHQNAHKRER 64
>At5g05120.1 68418.m00543 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 201
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 354 CKFCNRQFTKSYNLLIHERTHTDER 428
CK+C R+F K+ L H+ H ER
Sbjct: 29 CKYCPRKFDKTQALGGHQNAHRKER 53
>At4g22410.1 68417.m03238 ubiquitin carboxyl-terminal hydrolase
family protein similar to U4/U6.U5 tri-snRNP-associated
65 kDa protein [Homo sapiens] GI:13926071; contains Pfam
profile PF00443: Ubiquitin carboxyl-terminal hydrolase
Length = 340
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHSKES 512
Y+C +CGK F+ + + H Y HS E+
Sbjct: 25 YACLVCGKYFQGRSQ-KSHAYTHSLEA 50
>At4g22350.1 68417.m03231 ubiquitin carboxyl-terminal hydrolase
family protein similar to U4/U6.U5 tri-snRNP-associated
65 kDa protein [Homo sapiens] GI:13926071; contains Pfam
profile PF00443: Ubiquitin carboxyl-terminal hydrolase
Length = 510
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHSKES 512
Y+C +CGK F+ + + H Y HS E+
Sbjct: 109 YACLVCGKYFQGRSQ-KSHAYTHSLEA 134
>At4g22290.1 68417.m03224 ubiquitin carboxyl-terminal hydrolase
family protein similar to pVHL-interacting
deubiquitinating enzyme 1 type II [Homo sapiens]
GI:18698435; contains Pfam profile PF00443: Ubiquitin
carboxyl-terminal hydrolase
Length = 974
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHSKES 512
Y+C +CGK F+ + + H Y HS E+
Sbjct: 571 YACLVCGKYFQGRSQ-KSHAYTHSLEA 596
>At3g57490.1 68416.m06400 40S ribosomal protein S2 (RPS2D) 40S
ribosomal protein S2 - Arabidopsis thaliana,
SWISSPROT:RS2_ARATH
Length = 276
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 458 FPSARSPKRSQVHPF*RKPFKCLECGKGFVSQEHWRFTRF 577
F S+R ++ + F + F CL+ GF++ E W+ TRF
Sbjct: 208 FTSSRGSTKT-LGNFVKATFDCLQKTYGFLTPEFWKETRF 246
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHSK 506
+ C+ CGK F+ L HR H K
Sbjct: 194 FKCETCGKVFKSYQALGGHRASHKK 218
>At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 214
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 312 KNRRSG--PRTKKQFICKFCNRQFTKSYNLLIHERTHTDER 428
KN +G P K + C FC R+F + L H H +R
Sbjct: 35 KNYEAGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDR 75
>At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C)
Length = 285
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 458 FPSARSPKRSQVHPF*RKPFKCLECGKGFVSQEHWRFTRF 577
F S+R ++ + F + F CL+ GF++ E W+ TRF
Sbjct: 217 FTSSRGSTKT-LGNFVKATFDCLQKTYGFLTPEFWKETRF 255
>At1g59359.1 68414.m06677 40S ribosomal protein S2 (RPS2B) similar
to ribosomal protein S2 GI:430711 from [Drosophila
melanogaster]
Length = 284
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 458 FPSARSPKRSQVHPF*RKPFKCLECGKGFVSQEHWRFTRF 577
F S+R ++ + F + F CL+ GF++ E W+ TRF
Sbjct: 216 FTSSRGSTKT-LGNFVKATFDCLQKTYGFLTPEFWKETRF 254
>At1g58983.1 68414.m06666 40S ribosomal protein S2, putative similar
to ribosomal protein S2 GI:939717 from [Urechis caupo]
Length = 284
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 458 FPSARSPKRSQVHPF*RKPFKCLECGKGFVSQEHWRFTRF 577
F S+R ++ + F + F CL+ GF++ E W+ TRF
Sbjct: 216 FTSSRGSTKT-LGNFVKATFDCLQKTYGFLTPEFWKETRF 254
>At1g58684.1 68414.m06657 40S ribosomal protein S2, putative
Length = 284
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 458 FPSARSPKRSQVHPF*RKPFKCLECGKGFVSQEHWRFTRF 577
F S+R ++ + F + F CL+ GF++ E W+ TRF
Sbjct: 216 FTSSRGSTKT-LGNFVKATFDCLQKTYGFLTPEFWKETRF 254
>At1g58380.1 68414.m06642 40S ribosomal protein S2 (RPS2A) similar
to ribosomal protein S2 GI:939717 from (Urechis caupo)
Length = 284
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 458 FPSARSPKRSQVHPF*RKPFKCLECGKGFVSQEHWRFTRF 577
F S+R ++ + F + F CL+ GF++ E W+ TRF
Sbjct: 216 FTSSRGSTKT-LGNFVKATFDCLQKTYGFLTPEFWKETRF 254
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 393 LLIHERTHTDERPYSCDICGKAFRRQDHLRDH 488
L H + +P++C +CGKAF + R H
Sbjct: 249 LQTHYKRKHGSKPFACRMCGKAFAVKGDWRTH 280
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 342 KQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 488
K F C+ C + F + HE+ + + C CG F+ + L+DH
Sbjct: 260 KPFACRMCGKAFAVKGDWRTHEK--NCGKLWYCS-CGSDFKHKRSLKDH 305
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 509 KPFKCLECGKGFVSQEHWR 565
KPF C CGK F + WR
Sbjct: 260 KPFACRMCGKAFAVKGDWR 278
>At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 211
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHSKESL 515
+ C CGK F L H+ H KE L
Sbjct: 60 HECQYCGKEFANSQALGGHQNAHKKERL 87
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 417 TDERPYSCDICGKAFRRQDHLRDHRYIHSKESLSNVSNV 533
T + + C +CGK+F L H+ H +SN V
Sbjct: 113 TAVKSHVCSVCGKSFATGQALGGHKRCHYDGGVSNSEGV 151
>At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type domain, Prosite:PS00028
Length = 272
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 339 KKQFICKFCNRQFTKSYNLLIHERTHTDER 428
+K F C +C R F S L H+ H ER
Sbjct: 101 QKLFSCNYCQRTFYSSQALGGHQNAHKRER 130
>At3g51570.1 68416.m05648 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1226
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHSKESLSNVSNVEKGLSVKNI 560
++ ++C +A+ QD HR H ++ + N+E+G V+ I
Sbjct: 511 FARELCRRAYA-QDGREPHRLWHHQDITDVLKNIEEGAEVRGI 552
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHS--KESLS 518
+ C ICGK+F L H+ IH KE LS
Sbjct: 43 HKCKICGKSFECYQALGGHQRIHRPIKEKLS 73
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 509 KPFKCLECGKGFVSQEHWR 565
+PF C CGK F + WR
Sbjct: 338 RPFACRRCGKAFAVKGDWR 356
>At3g03440.1 68416.m00342 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 408
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 544 CQSRTLAVHKILHMEESPHKCPVCSRSFNQKVEP 645
C SR A +I + ++ H+ C R F+Q VEP
Sbjct: 78 CDSRLFAAKEIRRLTKTSHR---CRRHFSQAVEP 108
>At2g01620.1 68415.m00088 expressed protein
Length = 292
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 354 CKFCNRQFTKSYNLLIHERTHTD--ERP-YSCDIC 449
C+FCN+ + +++ HE TD RP + C+ C
Sbjct: 243 CRFCNKPYCTNHSSRRHEIAITDAASRPSFECEAC 277
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 339 KKQFICKFCNRQFTKSYNLLIHERTHTDE 425
+ F+CK+C + F L H R HT+E
Sbjct: 6 ENSFLCKYCYKTFPSGKALGGHIRIHTNE 34
>At5g54340.1 68418.m06767 zinc finger (C2H2 type) protein-related
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 244
Score = 27.5 bits (58), Expect = 8.4
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 342 KQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKESLSN 521
K +IC C R F + L H TH ++R +D S++ LSN
Sbjct: 45 KIYICYLCKRAFPTPHALGGHGTTHKEDRELERQQIESRLSNKDKSNLLFGGSSQDVLSN 104
Query: 522 VSNVEKGLS-VKNIGGSQDS 578
+++ L +K+I GS S
Sbjct: 105 DNHLGLSLGPLKSIEGSSSS 124
>At5g52350.1 68418.m06496 exocyst subunit EXO70 family protein
strong similarity to unknown protein (emb|CAB83315.1);
contains Pfam domain PF03081: Exo70 exocyst complex
subunit;
Length = 547
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 411 THTDERPYSCDICGKAFRRQDHLRDHRYIHSKESLSNVSNVE 536
TH DE+ Y C CG F R D + I+ E+L V VE
Sbjct: 21 TH-DEKLYECTKCGIFFHR-DSVESATEINPHENLGEVRAVE 60
>At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 402
Score = 27.5 bits (58), Expect = 8.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHR 491
+ C+ CGK FR + + ++HR
Sbjct: 64 FRCEECGKGFRYEKYFKNHR 83
>At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 275
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Frame = +3
Query: 411 THTDERPYSCDICGKAFRRQ----DHLRDHR 491
TH + P C++CGK F HLR H+
Sbjct: 135 THLPQGPPMCNVCGKGFASWKAVFGHLRQHK 165
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 429 PYSCDICGKAFRRQDHLRDHRYIH 500
PY C++C KAF L H+ H
Sbjct: 105 PYKCNVCEKAFPSYQALGGHKASH 128
>At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 395
Score = 27.5 bits (58), Expect = 8.4
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = +3
Query: 327 GPRTKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSK 506
G + K+ F+C +CN + ++ L R H D + + G +D + Y +S
Sbjct: 215 GLKVKRDFVCLYCN-ELCHPFSSLEAVRKHMDAKGHCKVHYGDGGDEEDAELEEFYDYSS 273
Query: 507 ESLSNVSN--VEKGLSVKNI---GGSQ 572
++ N V G SV + GGS+
Sbjct: 274 SYVNGDENQMVVSGESVNTVELFGGSE 300
>At1g68360.1 68414.m07808 zinc finger protein-related similar to
zinc finger protein GI:790683 from [Arabidopsis
thaliana]
Length = 244
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 423 ERPYSCDICGKAFRRQDHLRDHRYIHSKE 509
ER Y C C + F L H+ H KE
Sbjct: 70 ERKYECQYCCREFGNSQALGGHQNAHKKE 98
>At1g48880.1 68414.m05476 hypothetical protein
Length = 485
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +2
Query: 497 PF*RKPFKCLECGKGFVSQEHWRFTRFCTWKNLHTNVP-FAVEVSTKR 637
PF K F CL G+G WR WK H VP F V KR
Sbjct: 137 PFVEKGFNCLGNGRGHDEYLKWR------WKPKHCTVPRFEVRDVLKR 178
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 27.5 bits (58), Expect = 8.4
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +3
Query: 432 YSCDICGKAFRRQDHLRDHRYIHSKE 509
+SC +C K F R ++++ H + H +
Sbjct: 101 FSCSVCNKTFNRFNNMQMHMWGHGSQ 126
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,136,103
Number of Sequences: 28952
Number of extensions: 249304
Number of successful extensions: 1090
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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