Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0036
(597 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 171 4e-43
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 171 4e-43
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 128 4e-30
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 103 1e-22
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 73 2e-13
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 40 0.002
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 35 0.043
SB_28743| Best HMM Match : PCI (HMM E-Value=0.00094) 32 0.40
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 31 0.93
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 30 1.2
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 30 1.6
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 30 1.6
SB_28972| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_51903| Best HMM Match : Herpes_UL49_5 (HMM E-Value=3.5) 29 2.9
SB_5872| Best HMM Match : Herpes_UL49_5 (HMM E-Value=3.5) 29 2.9
SB_922| Best HMM Match : DUF1532 (HMM E-Value=4.1) 29 2.9
SB_7359| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 28 5.0
SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 28 6.6
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 27 8.7
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 171 bits (416), Expect = 4e-43
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 434
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 102
Query: 435 KAKIQDKEGIPPDQQRLIFAGKQLE 509
KAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLE 127
Score = 171 bits (416), Expect = 4e-43
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 434
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178
Query: 435 KAKIQDKEGIPPDQQRLIFAGKQLE 509
KAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLE 203
Score = 171 bits (416), Expect = 4e-43
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 434
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 195 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 254
Query: 435 KAKIQDKEGIPPDQQRLIFAGKQLE 509
KAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLE 279
Score = 171 bits (416), Expect = 4e-43
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 434
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 271 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 330
Query: 435 KAKIQDKEGIPPDQQRLIFAGKQLE 509
KAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLE 355
Score = 171 bits (416), Expect = 4e-43
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 434
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 347 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 406
Query: 435 KAKIQDKEGIPPDQQRLIFAGKQLE 509
KAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 407 KAKIQDKEGIPPDQQRLIFAGKQLE 431
Score = 171 bits (416), Expect = 4e-43
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 434
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 423 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 482
Query: 435 KAKIQDKEGIPPDQQRLIFAGKQLE 509
KAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 483 KAKIQDKEGIPPDQQRLIFAGKQLE 507
Score = 103 bits (246), Expect = 1e-22
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 357 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 509
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 51
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 42
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 194
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 270
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 346
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 422
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 498
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 356
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 499 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 541 KESTLHLVLRLRGGMQIFV 597
KESTLHLVLRLRGGMQIFV
Sbjct: 63 KESTLHLVLRLRGGMQIFV 81
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 541 KESTLHLVLRLRGGMQIFV 597
KESTLHLVLRLRGGMQIFV
Sbjct: 139 KESTLHLVLRLRGGMQIFV 157
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 541 KESTLHLVLRLRGGMQIFV 597
KESTLHLVLRLRGGMQIFV
Sbjct: 215 KESTLHLVLRLRGGMQIFV 233
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 541 KESTLHLVLRLRGGMQIFV 597
KESTLHLVLRLRGGMQIFV
Sbjct: 291 KESTLHLVLRLRGGMQIFV 309
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 541 KESTLHLVLRLRGGMQIFV 597
KESTLHLVLRLRGGMQIFV
Sbjct: 367 KESTLHLVLRLRGGMQIFV 385
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 541 KESTLHLVLRLRGGMQIFV 597
KESTLHLVLRLRGGMQIFV
Sbjct: 443 KESTLHLVLRLRGGMQIFV 461
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 541 KESTLHLVLRLRGG 582
KESTLHLVLRLRGG
Sbjct: 519 KESTLHLVLRLRGG 532
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 52 DGRTLSDYNIQK 63
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 128 DGRTLSDYNIQK 139
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 204 DGRTLSDYNIQK 215
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 280 DGRTLSDYNIQK 291
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 356 DGRTLSDYNIQK 367
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 432 DGRTLSDYNIQK 443
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 508 DGRTLSDYNIQK 519
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 171 bits (416), Expect = 4e-43
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 434
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 102
Query: 435 KAKIQDKEGIPPDQQRLIFAGKQLE 509
KAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLE 127
Score = 171 bits (416), Expect = 4e-43
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 434
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178
Query: 435 KAKIQDKEGIPPDQQRLIFAGKQLE 509
KAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLE 203
Score = 171 bits (416), Expect = 4e-43
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 434
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 195 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 254
Query: 435 KAKIQDKEGIPPDQQRLIFAGKQLE 509
KAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLE 279
Score = 171 bits (416), Expect = 4e-43
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 434
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENV
Sbjct: 271 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 330
Query: 435 KAKIQDKEGIPPDQQRLIFAGKQLE 509
KAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLE 355
Score = 103 bits (246), Expect = 1e-22
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 357 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 509
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 51
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 42
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 118
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 194
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 270
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 346
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 356
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 347 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 541 KESTLHLVLRLRGGMQIFV 597
KESTLHLVLRLRGGMQIFV
Sbjct: 63 KESTLHLVLRLRGGMQIFV 81
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 541 KESTLHLVLRLRGGMQIFV 597
KESTLHLVLRLRGGMQIFV
Sbjct: 139 KESTLHLVLRLRGGMQIFV 157
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 541 KESTLHLVLRLRGGMQIFV 597
KESTLHLVLRLRGGMQIFV
Sbjct: 215 KESTLHLVLRLRGGMQIFV 233
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 541 KESTLHLVLRLRGGMQIFV 597
KESTLHLVLRLRGGMQIFV
Sbjct: 291 KESTLHLVLRLRGGMQIFV 309
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 541 KESTLHLVLRLRGG 582
KESTLHLVLRLRGG
Sbjct: 367 KESTLHLVLRLRGG 380
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 52 DGRTLSDYNIQK 63
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 128 DGRTLSDYNIQK 139
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 204 DGRTLSDYNIQK 215
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 280 DGRTLSDYNIQK 291
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 356 DGRTLSDYNIQK 367
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 128 bits (308), Expect = 4e-30
Identities = 64/84 (76%), Positives = 73/84 (86%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 434
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI VK KT TL+VEASDT+E+V
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQISVKA-HWKTFTLDVEASDTVESV 101
Query: 435 KAKIQDKEGIPPDQQRLIFAGKQL 506
K KIQ++EGIPP QRL++ ++L
Sbjct: 102 KEKIQNREGIPPKVQRLLYEEEEL 125
Score = 103 bits (246), Expect = 1e-22
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 357 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 509
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 51
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 42
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQI VK KT TL+VE SDT+E+VK KIQ++EGIPP QR
Sbjct: 77 MQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQR 117
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 541 KESTLHLVLRLRGGMQIFV 597
KESTLHLVLRLRGGMQI V
Sbjct: 63 KESTLHLVLRLRGGMQISV 81
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 341
L++ ++L D R+L+DYNI++ S LHL L
Sbjct: 118 LLYEEEELVDNRSLADYNIKQGSILHLFL 146
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 52 DGRTLSDYNIQK 63
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 103 bits (247), Expect = 1e-22
Identities = 51/55 (92%), Positives = 51/55 (92%)
Frame = +3
Query: 345 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 509
L MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 75 LTSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 129
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
Sbjct: 79 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 120
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQK 317
LIFAGKQLEDGRTLSDYNIQK
Sbjct: 121 LIFAGKQLEDGRTLSDYNIQK 141
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 130 DGRTLSDYNIQK 141
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 103 bits (246), Expect = 1e-22
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 357 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 509
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 51
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 42
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 356
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 541 KESTLHLVLRLRGG 582
KESTLHLVLRLRGG
Sbjct: 63 KESTLHLVLRLRGG 76
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 52 DGRTLSDYNIQK 63
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 72.9 bits (171), Expect = 2e-13
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 359
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 9 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 462 IPPDQQRLIFAGKQLE 509
IPPDQQRLIFAGKQLE
Sbjct: 2 IPPDQQRLIFAGKQLE 17
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1
Query: 541 KESTLHLVLRLRGGM 585
KESTLHLVLRLRGG+
Sbjct: 29 KESTLHLVLRLRGGV 43
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 DGRTLSDYNIQK 544
DGRTLSDYNIQK
Sbjct: 18 DGRTLSDYNIQK 29
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 363 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETD 515
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L +
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDE 124
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 136 IFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQR 255
I V TLTG+ I + + P TI VK I+ K G P DQQR
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQR 113
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 356
L+F G+ L D T I +TLHL++RL GG
Sbjct: 114 LVFNGQVLSDEDTFEKVGIFAGATLHLIVRLLGG 147
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 231
M ++++TLTG L V P +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
Score = 34.3 bits (75), Expect = 0.076
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 357 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 458
M ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 312 QKESTLHLVLRLRGGMQIFVKT--LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 485
QK+ST+ ++ +++ V+ +G L++ + TIE ++ ++ DK G PP QR
Sbjct: 19 QKQSTVEVIKEKTVRLRVVVEDSETSGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRW 78
Query: 486 IFAGK 500
I K
Sbjct: 79 IIGKK 83
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 154 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 255
+G L++ + TIE ++ ++ DK G PP QR
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQR 77
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 35.1 bits (77), Expect = 0.043
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 360 QIFVKTLTGKTITLEVEASDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 536
Q+F T TL +D + +K++I+ K GIP D QRL F K+L DA
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 537 FKR 545
K+
Sbjct: 67 LKQ 69
>SB_28743| Best HMM Match : PCI (HMM E-Value=0.00094)
Length = 322
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +1
Query: 163 TITLEVEPSDTIENVKAKIQDKEG---IPPDQQRSSLLASSWKTDAPCQ 300
TIT E+ D E+ ++ D G +PP QQRS +LA+ +K D CQ
Sbjct: 108 TITQEILDDDESEDRFEEVLDTSGPIELPPCQQRSRMLANLYK-DERCQ 155
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 30.7 bits (66), Expect = 0.93
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +3
Query: 357 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETD 515
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+ +
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDE 39
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 318 ESTLHLVLRLRGGM 359
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 544 ESTLHLVLRLRGGM 585
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 318 ESTLHLVLRLRGGM 359
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 544 ESTLHLVLRLRGGM 585
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +3
Query: 378 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPC 524
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+ + C
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQALSKC 148
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 357 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 506
M++ V G TL+V +EN +A ++ + G+P + L G QL
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQL 50
>SB_28972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +3
Query: 228 RRNSS*STALIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM----QIFVKTLTGK 389
R N STA IF ++ E R + + E LV GGM QIF+KTL K
Sbjct: 98 RSNHGKSTATIFREQENEKKRKYNQRVMNVEMGTPLVFGTNGGMGADGQIFLKTLANK 155
>SB_51903| Best HMM Match : Herpes_UL49_5 (HMM E-Value=3.5)
Length = 529
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/86 (23%), Positives = 35/86 (40%)
Frame = -2
Query: 563 TRWSVDSFECCSLTRCVRLQLLASKDETLLIRRNSFFVLDLRLHILNCVRSFYFQSDGLS 384
++W V S+ S+T+CV + R+ + V + L + CV +F DG++
Sbjct: 296 SKWPV-SYVTLSVTQCVNTFNVYQDSMASEDMRSKWLVSYVTLLVTQCVTTFNVYQDGMA 354
Query: 383 GQSFHEDLHASTKTQYKMECGFFLNV 306
+ S T +C NV
Sbjct: 355 SEDLRSKWPVSYVTLLVTQCVTTFNV 380
>SB_5872| Best HMM Match : Herpes_UL49_5 (HMM E-Value=3.5)
Length = 529
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/86 (23%), Positives = 35/86 (40%)
Frame = -2
Query: 563 TRWSVDSFECCSLTRCVRLQLLASKDETLLIRRNSFFVLDLRLHILNCVRSFYFQSDGLS 384
++W V S+ S+T+CV + R+ + V + L + CV +F DG++
Sbjct: 296 SKWPV-SYVTLSVTQCVNTFNVYQDSMASEDMRSKWLVSYVTLLVTQCVTTFNVYQDGMA 354
Query: 383 GQSFHEDLHASTKTQYKMECGFFLNV 306
+ S T +C NV
Sbjct: 355 SEDLRSKWPVSYVTLLVTQCVTTFNV 380
>SB_922| Best HMM Match : DUF1532 (HMM E-Value=4.1)
Length = 294
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/86 (23%), Positives = 35/86 (40%)
Frame = -2
Query: 563 TRWSVDSFECCSLTRCVRLQLLASKDETLLIRRNSFFVLDLRLHILNCVRSFYFQSDGLS 384
++W V S+ S+T+CV + R+ + V + L + CV +F DG++
Sbjct: 3 SKWPV-SYVTLSVTQCVNTFNVYQDSMASEDMRSKWLVSYVTLLVTQCVTTFNVYQDGMA 61
Query: 383 GQSFHEDLHASTKTQYKMECGFFLNV 306
+ S T +C NV
Sbjct: 62 SEDLRSKWPVSYVTLLVTQCVTTFNV 87
>SB_7359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 229 EGIPPDQQRSSLLASSWKTDAPCQTTTFKK 318
+G P Q+ S++ S+W T C T T K
Sbjct: 110 QGSSPTMQQGSVVLSTWTTGTQCVTVTLPK 139
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 255 LIFAGKQLEDGRTLSDYNIQKES 323
LI+AGK L D L +YNI ++S
Sbjct: 112 LIYAGKILNDDNPLKEYNIDEKS 134
>SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/81 (18%), Positives = 36/81 (44%)
Frame = +3
Query: 333 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLET 512
+ +R + T I L ++ + NV+ ++Q+++G + + Q +
Sbjct: 314 MTMRTSAAIPFSTAIRTSTAIPLPMDLQSSPLNVR-RLQEQDGSHIIDMNFLESQLQAKE 372
Query: 513 DAPCQTTTFKRIHTPSCTASS 575
D+P T+ +H+P+ + S
Sbjct: 373 DSPASTSLLSSVHSPTTSTPS 393
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 384 GKTITLEVE-ASDTIENVKAKIQDKEGIPPDQQRLIFAG 497
G T E+E A +++E + I GIP D+Q L+ G
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICG 48
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Frame = +2
Query: 362 DLRENSDRKDHHFGS--RSFGHN*ECEGEDPRQRRNSS*STASHLCWQAAGDGRTL---S 526
DLR + GS R GH E EGE RRN + + S C ++ D L S
Sbjct: 951 DLRRENTYSGSDGGSVARDEGHLAEKEGEGEADRRNGNQTVESQACAPSSVDPSALGVAS 1010
Query: 527 DYNIQ 541
DY+ +
Sbjct: 1011 DYHTE 1015
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 258 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT-GKTITLEVEASDTIENV 434
+ + + R L + ++ TLHLV LRG I +T + G++ V A I
Sbjct: 326 VVGSRHFDVARMLREVDVTGTITLHLVEPLRGFGAIGPRTASRGQSTEEPVNAEKKIGTG 385
Query: 435 KAKIQDKEGIPP 470
KA ++ K PP
Sbjct: 386 KATLRLKAKGPP 397
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 459 GIPPDQQRLIFAGKQLETD 515
GIP ++QRLIF GK L+ +
Sbjct: 1 GIPAERQRLIFKGKVLQDE 19
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,131,403
Number of Sequences: 59808
Number of extensions: 432152
Number of successful extensions: 1329
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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