Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0036
         (597 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.75 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   4.0  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   5.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   6.9  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   9.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.2  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 414 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 503
           +DT+   K KI  K  I PD + L+   KQ
Sbjct: 732 TDTVLAYKPKILGKPTISPDSRHLVTLDKQ 761


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +3

Query: 75  IIVRHTTDKAKLLYLLDHHANLCEDSNWQDHYI 173
           ++  HT+D+ K   +  ++ N    + ++D+YI
Sbjct: 118 LVPNHTSDQHKWFQMSINNTNNNNTNKYKDYYI 150


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 479 LLIRRNSFFVLDLRLHILNC 420
           LLIR  SF +L+  L   NC
Sbjct: 137 LLIRFKSFSLLNFNLLFFNC 156



 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 252 LLIRRNSFFVLDLRLHILNC 193
           LLIR  SF +L+  L   NC
Sbjct: 137 LLIRFKSFSLLNFNLLFFNC 156


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 533 NIQKNPHSILYCVFVEACR 589
           NIQK+P ++   +F E  R
Sbjct: 490 NIQKSPRTLTLGIFAEKLR 508


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 223 DKEGIPPDQQRSSLLASSWKTD 288
           D E  P D+QR  L  +SW  D
Sbjct: 134 DVEFFPFDEQRCVLKWASWTYD 155


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +3

Query: 507 ETDAPCQTTTFKRIHTPSCTASSW 578
           + D P +    K+ HTP+    +W
Sbjct: 780 DPDVPIELQIQKQSHTPNGIVKTW 803



 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 296 VRLQHSKRIHTPSCTASSW 352
           + LQ  K+ HTP+    +W
Sbjct: 785 IELQIQKQSHTPNGIVKTW 803


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,042
Number of Sequences: 438
Number of extensions: 3937
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)